LOCUS       NM_001100606            1413 bp    mRNA    linear   ROD 31-MAY-2024
DEFINITION  Mus musculus adenosine deaminase, tRNA-specific 3 (Adat3), mRNA.
ACCESSION   NM_001100606
VERSION     NM_001100606.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Ramos-Morales,E., Bayam,E., Del-Pozo-Rodriguez,J.,
            Salinas-Giege,T., Marek,M., Tilly,P., Wolff,P., Troesch,E.,
            Ennifar,E., Drouard,L., Godin,J.D. and Romier,C.
  TITLE     The structure of the mouse ADAT2/ADAT3 complex reveals the
            molecular basis for mammalian tRNA wobble adenosine-to-inosine
            deamination
  JOURNAL   Nucleic Acids Res 49 (11), 6529-6548 (2021)
   PUBMED   34057470
  REMARK    GeneRIF: The structure of the mouse ADAT2/ADAT3 complex reveals the
            molecular basis for mammalian tRNA wobble adenosine-to-inosine
            deamination.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY036102.1, AK020747.1 and BX632866.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY036102.1, CA328144.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-366               BY036102.1         1-366
            367-1408            AK020747.1         24-1065
            1409-1413           BX632866.1         1-5                 c
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..1413
                     /gene="Adat3"
                     /gene_synonym="A430024H01Rik"
                     /note="adenosine deaminase, tRNA-specific 3"
                     /db_xref="GeneID:100113398"
                     /db_xref="MGI:MGI:1924344"
     exon            1..70
                     /gene="Adat3"
                     /gene_synonym="A430024H01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            71..1411
                     /gene="Adat3"
                     /gene_synonym="A430024H01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             87..1136
                     /gene="Adat3"
                     /gene_synonym="A430024H01Rik"
                     /note="tRNA-specific adenosine deaminase-like protein 3;
                     tRNA-specific adenosine deaminase 3; tRNA-specific
                     adenosine-34 deaminase subunit ADAT3; adenosine deaminase,
                     tRNA-specific 3, TAD2 homolog"
                     /codon_start=1
                     /product="probable inactive tRNA-specific adenosine
                     deaminase-like protein 3"
                     /protein_id="NP_001094076.1"
                     /db_xref="CCDS:CCDS48637.1"
                     /db_xref="GeneID:100113398"
                     /db_xref="MGI:MGI:1924344"
                     /translation="MEPTSGFAEQPGPVKAESEEQEPAQWQALPVLSEQQSGAVELIL
                     AYAAPVLDKRQTSRLLREVSAVYPLPAQPHLKRVRPSRSAGGAQSSDLLLCLAGPSAG
                     PRSLAELLPRPAVDPRGLGTPFLVPVPARPPLTRSQFEEARAHWPTSFHEDKQVTSAL
                     AGQLFSTQERAAMQTHMERAVCAAQRAAAQGLRAVGAVVVDPASDRVLATGHDCSSVA
                     SPLLHAVMVCIDLVAQGQGRGSCDLRSHPACSFTQATATQGARAGSVRKLDEDSLPYV
                     CTGYDLYVTREPCVMCAMALVHARIQRVFYGAPSPDGALGTLFRVHARPDLNHRFQVF
                     RGILEDQCRQLDPDP"
     regulatory      1392..1397
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Adat3"
                     /gene_synonym="A430024H01Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1411
                     /gene="Adat3"
                     /gene_synonym="A430024H01Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcggtggcag gcgtggcggc ccggttgcta ggacttggat aagcgtggcg ttcgctcggg
       61 tgtccctcag tcgagccccg ttgaggatgg agcccacctc aggctttgca gagcaacctg
      121 ggcctgtgaa ggctgaaagt gaggagcaag agccggcgca atggcaagcc ctccctgtcc
      181 tgtcggagca gcagtcgggg gccgtggagc tgatactggc ctatgctgca cctgtcctgg
      241 acaagcgcca gacgtcccgc ctcctccggg aggtgtctgc tgtctatcca cttcctgccc
      301 agccccacct caagcgggtg cgccccagcc gcagtgcagg aggtgcacag tcatcggatc
      361 tgctgctgtg cttggcaggg ccctccgcgg gcccgcgctc tctggcggag ctccttccca
      421 ggccggccgt ggacccacgt ggcctgggca cacctttcct ggtgcctgtg cctgcccggc
      481 cgcccctcac ccgaagccag tttgaggagg cacgagccca ctggcctaca tccttccatg
      541 aagacaagca ggtgaccagt gctctggccg ggcaactctt ctccacgcag gagcgagctg
      601 ccatgcaaac ccacatggaa cgggcggtat gtgcggccca gagggcagcg gctcaggggc
      661 tgcgggcagt gggcgccgtc gtggtggacc cagcctcgga ccgcgtgttg gccacaggcc
      721 atgactgcag cagtgtagcc agccccctgc tgcatgccgt catggtgtgc atcgacctgg
      781 tggcccaggg gcagggccgc ggttcctgtg acctcagaag ccacccggct tgctccttta
      841 cacaggccac tgccactcaa ggtgcccgag ccggtagcgt gcgcaagctg gatgaggaca
      901 gcctgcccta tgtgtgcact ggctatgacc tgtacgtcac ccgagagccc tgtgtcatgt
      961 gtgctatggc cctagtccat gcccgcatcc agcgagtctt ctatggggct ccctcccctg
     1021 atggtgcctt gggcacactc ttccgtgtcc atgctcggcc agacctcaac caccgcttcc
     1081 aggtgttccg cggtattctc gaggaccagt gccgccagct ggaccccgac ccatagttct
     1141 ggtgacctgc ttctagacca ttctctgctc ctggccagcc cgtgtcccct gcggctccat
     1201 ggcctggggg cctcaccctc tgtgatgata ctgatcacct gtgccagact gtgggcctct
     1261 cagtttccag actgcagctt ctctgctggc tgcgacgaca gtggggctca gctctgctta
     1321 caagcccagt ggctgtctta cagtccccag gtcctccagg ctcggggcag ggagcagcca
     1381 tcgagtgtga aaataaaaca cctcaaacca aaa
//
