LOCUS       XM_006505262            8800 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ADAM metallopeptidase with thrombospondin
            type 1 motif 9 (Adamts9), transcript variant X4, mRNA.
ACCESSION   XM_006505262
VERSION     XM_006505262.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006505262.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8800
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..8800
                     /gene="Adamts9"
                     /gene_synonym="1810011L16Rik; 8430403M15Rik;
                     E030027K14Rik; Gsfund3; Mhdaund3; Mhdaund4; UND3; UND4"
                     /note="ADAM metallopeptidase with thrombospondin type 1
                     motif 9; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 18 ESTs, 295 long SRA
                     reads, and 97% coverage of the annotated genomic feature
                     by RNAseq alignments, including 16 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:101401"
                     /db_xref="MGI:MGI:1916320"
     CDS             1296..6917
                     /gene="Adamts9"
                     /gene_synonym="1810011L16Rik; 8430403M15Rik;
                     E030027K14Rik; Gsfund3; Mhdaund3; Mhdaund4; UND3; UND4"
                     /codon_start=1
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X4"
                     /protein_id="XP_006505325.1"
                     /db_xref="GeneID:101401"
                     /db_xref="MGI:MGI:1916320"
                     /translation="MQLVSWATLLTLLVPDLVEMRSPDSAAAVRKDRLHPRQVKLLES
                     LSEYEIASPIRVNPLGEPFPTNVHFKRRRRSINSASDPWPAFASSSSSSTSSQEHYRL
                     SAFGQQFLFNLTAHTGFIAPLFTVTLLGEPGVNQTKLYSEEEMELRHCFYKGHVNTKS
                     EHTAVISLCSGMMGTFRSHDGDYFIEPLQSVDEQEDEEEQNKPHIIYRHSTPQREPST
                     GKHACATSELKNSHSKDKRKIRMRKRRKRNSLADDVALLKSGLATKVLSGYSNQTNST
                     RDRWNHKRTKRFLSYPRFVEVMVVADHRMVLYHGANLQHYILTLMSIVASIYKDSSIG
                     NLINIVIVNLVVIHNEQEGPYINFNAQTTLKNFCQWQHSKNYLGGIQHDTAVLVTRED
                     ICRAQDKCDTLGLAELGTICDPYRSCSISEDSGLSTAFTIAHELGHVFNMPHDDSNKC
                     KEEGVKSPQHVMAPTLNFYTNPWMWSKCSRKYITEFLDTGYGECLLNEPASRTYPLPS
                     QLPGLLYNVNKQCELIFGPGSQVCPYMMQCRRLWCNNVDGAHKGCRTQHTPWADGTEC
                     EPGKHCKFGFCVPKEMEGPAIDGSWGGWSHFGTCSRTCGGGIKTAIRECNRPEPKNGG
                     KYCVGRRMKFKSCNTEPCMKQKRDFREEQCAHFDGKHFNINGLLPSVRWVPKYSGILM
                     KDRCKLFCRVAGNTAYYQLRDRVIDGTPCGQDTNDICVQGLCRQAGCDHILNSKARKD
                     KCGICGGDNSSCKTVAGTFNTVHYGYNTVVRIPAGATSIDVRQHSFSGKSEDDNYLAL
                     SNSKGEFLLNGDFVVSMSKREVRVGSAVIEYSGSDNVVERLNCTDRIEEELLLQVLSV
                     GKLYNPDVRYSFNIPIEDKPQQFYWNSHGPWQACSKPCQGERRRKLVCTRESDQLTVS
                     DQRCDRLPQPGPVTEACGTDCDLRWHVASKSECSAQCGLGYRTLDIHCAKYSRMDGKT
                     EKVDDSFCSSQPRPSNQEKCSGECSTGGWRYSAWTECSRSCDGGTQRRRAICVNTRND
                     VLDDSKCTHQEKVVVQSCNEFSCPHWKTGDWSECLVTCGKGHKHRQVWCQFGEDRLSD
                     RMCDPEAKPEPMQTCQQPECAAWQAGPWGQCSVTCGQGYQLRAVKCIMGTYMSVVDDN
                     DCNAATRPTDTQDCELASCHPSILALEPRRNAQSIPRTQWRFGSWTPCSATCGKGTRM
                     RYVSCRDEDGSVADESACATLPKPVAKEECSVTPCGQWKALDWSSCSVTCGQGKATRQ
                     VVCVNYSDHVIDRSECDPDYIPETDQDCSMSPCPQWTGLAHPFQNEDFRPRSDSPSRT
                     HVLGGNQWRTGPWGACSSTCAGGSQRRVVVCQDENGYTANDCVERIKPDEQRACESGP
                     CPQWAYGSWGECTKLCGGGMRTRLVVCQRANGDRFPDLSCEVLDKPTDREQCNTHACP
                     QDAAWSTGPWSSCSVSCGRGHKHRNVYCLAKDGSHLESDNCKHLPKPHGHRRCRGGRC
                     PRWKAGAWSQCTKTCGEGSRYRQVVCVAEDQSEVHSTHCDSDQRPPDRESCSLQPCEY
                     VWITGEWSECSVTCGKGYRQRLVSCSEIYTGKENYEYSYQTTVNCPGAQPPSVHPCYL
                     RDCPVSATWRVGNWGSCSVSCGIGVMHRSVQCLTNEDQPSHLCPTDTKPEERKACRNV
                     YNCELPQNCKEVKKLNSASVDGEYFLAVRGKPLKVFCAGMNSDYPKEYVTLAHGDSEN
                     FSEVYGHRLHNPTECPYNGSRRDDCHCRKDYTAAGFSSFQKIRLDLTSMQIITTDLEF
                     ARTSEGHPVPFATAGDCYSAAKCPQGRFSINLYGTGLSLTESARWTSQGNYAVSDIKK
                     SPDGTRVVGKCGGYCGKCTPSSGTGLEVRVS"
ORIGIN      
        1 ttcgagtgcc ttccccggga cctatggcct cacagtcctt ccctactccc ttcccctcaa
       61 atgtcgggca gagttggggg cttccaagtc cccaccctct ctaaccgcac agtaagcgtc
      121 ttaacctttt tttggggggg ggggggctac agaaacctgt agagctctcg ccacagggac
      181 agaggtcccg ggaagacccg ggtttaaaca gttgcgaaac tttcagagaa ctgcggatca
      241 gaaacacaac tagaactact ggactgaaat agatccctgc ctttaaaact cttgacttgg
      301 ggcaattaag tagagtggag ctcaggtgac aaatctggtt catagtgatc aagtgtagga
      361 ctaggacggc gcaaggctac tttttttttt ttttttcctc ttgtaaggaa tgccaagttg
      421 ggtgatggaa agagacgggg gcagaatgaa gaggacaggc agatacggag aagtggagat
      481 ggctcagtag aaagcggaga aggaagagac catcagagaa aagggacatg ggcccaaaga
      541 gacctacacc aagacctggc gagagagaga ttccaaaccg gagaccaaag taggaaaggg
      601 gaatcggagt gggtggctga gcgccacctc agagagagag aactttctct gctctccctc
      661 cttctcaggg aatctctgct aaccccacct cggggaggtg acgcggacgg ccaccgattg
      721 ctccggcact gccggcgcct ctggcctccg cctccggcag ctggaggggc ctaaagcggt
      781 gagtcctggc acccgcggcc gaggagggga caggatctac aaggaggcgg gccgcctgcc
      841 ccgttttctc ctcccctctc ctcctcctgg aggcgtgcac ctagggtatt tgagcgcccg
      901 cgggggcccc cgccccctgg ccccccattc aagaagcggc tcggctaact cagccagcaa
      961 agggcgcccg gcgcgcctcg gagcgcacgt tccgcgcctt ctcctgcccg caggctggac
     1021 attatgcggc cgagccgccg agccctagtc ctccgcctcc ttctcctcct cctgcggccc
     1081 gagcgcctca gctcacggca ggcggcagcg ttgctcagcg gagcgcagac gggaccctct
     1141 ctgcaggacc tcagcgactc ctaaagtcaa aaagttggcg gcagggcgcc ggggttccgc
     1201 gcgctctcca aggctgctgc ctcgcgtcgc cgccagccac caaagccggc aggagggagg
     1261 gggtgggaga agcgggggga ggggtgagga gcaccatgca gttagtatcc tgggccacac
     1321 tgctaacgct cctggtgccg gacctggttg agatgaggag ccctgactcc gcggcggccg
     1381 tgcgcaagga caggctgcac ccgaggcaag tgaaattatt agagagtctg agcgaatatg
     1441 agatcgcgtc tcccatccga gtgaaccccc tcggggaacc ctttcccacg aacgtgcact
     1501 tcaaaagaag gcggcgaagc attaactctg cctctgaccc ctggcctgcc ttcgcctcct
     1561 cttcgtcttc ctctacctct tcccaggagc actaccgcct ctcagccttc ggccagcagt
     1621 ttctatttaa tctcaccgcc cataccggat ttatcgctcc actgttcact gtcaccctcc
     1681 ttggagagcc aggggtaaac cagaccaagc tgtattccga ggaggaaatg gaacttaggc
     1741 actgtttcta caaaggccat gtcaatacca agtccgagca cactgcggtc atcagcctgt
     1801 gctccggaat gatgggcacg ttccgctctc acgatggaga ttatttcatt gaaccactgc
     1861 agtctgtgga tgagcaagag gatgaagagg aacaaaacaa accccacatt atttataggc
     1921 acagcacccc tcagagggaa ccctccacag gaaagcatgc ctgtgccacc tcagaactca
     1981 aaaatagtca cagtaaagac aagcggaaaa tcagaatgcg aaaacggaga aagaggaata
     2041 gcctggctga cgacgtggca ctgctaaaga gcggtttggc aacaaaggtg ctctctggct
     2101 atagcaacca gacaaacagc acaagggaca gatggaacca caaaagaacc aaacgctttc
     2161 tgtcctaccc acggtttgta gaggtgatgg tggtggctga ccacaggatg gttttatacc
     2221 acggagcaaa ccttcaacat tatatcttaa ccttaatgtc cattgtagct tctatctata
     2281 aagactcaag tattggaaat ttaattaata ttgttattgt gaacttagtt gtgattcata
     2341 atgaacagga aggaccttac ataaatttca atgcccagac aacattaaag aacttttgcc
     2401 agtggcagca ctcaaagaac tacttgggtg ggattcagca cgacacagcc gttctggtca
     2461 caagggaaga tatctgcaga gctcaggaca aatgtgacac cttaggtctt gctgaactgg
     2521 gaaccatttg cgacccctac cgaagctgtt ccattagtga agacagtggg ctgagcacag
     2581 ctttcacaat agctcacgag ctgggccatg tgtttaatat gcctcacgat gacagcaata
     2641 aatgcaaaga agaaggagtt aagagtcccc agcatgtcat ggcaccaaca ctgaacttct
     2701 acaccaaccc ctggatgtgg tcaaagtgca gtcggaaata catcactgag ttcctagaca
     2761 ctgggtacgg agagtgcttg ctgaatgaac ctgcatccag gacctatcct ttgccttccc
     2821 aactgcccgg ccttctctac aacgtgaata aacaatgtga actgattttt gggccaggct
     2881 ctcaagtgtg cccctatatg atgcagtgca gacggctctg gtgcaataat gtggatggag
     2941 cacacaaagg ctgcaggact cagcacacgc cctgggcaga tggaaccgag tgtgagcctg
     3001 gaaagcactg caagtttgga ttttgtgttc ccaaagaaat ggagggccct gcaattgatg
     3061 gatcctgggg aggttggagc cactttggga cctgctcaag aacgtgtgga ggaggcatca
     3121 aaacagccat cagagagtgc aacagaccag agccaaaaaa tggtgggaag tactgtgtag
     3181 gaaggagaat gaagttcaaa tcctgcaaca cggagccctg catgaagcag aagcgagact
     3241 tccgagagga gcagtgtgct cactttgatg gcaaacactt caacatcaat ggtctgctgc
     3301 ccagcgtacg ctgggttcct aagtacagcg gaattttgat gaaggaccgg tgcaagttgt
     3361 tctgcagagt ggcaggaaac acagcctact accagctccg agacagagtg attgacggaa
     3421 ccccctgtgg ccaggacaca aatgacatct gtgtccaagg cctttgccgg caagctggat
     3481 gtgatcatat tttaaactca aaggcccgga aagataaatg tgggatttgt ggtggagata
     3541 attcttcatg caaaacagtg gcaggaacat ttaacactgt ccattatggt tacaatactg
     3601 ttgtccgaat tccggctggt gctaccagca ttgacgtgcg tcagcacagc ttctcaggga
     3661 agtctgagga tgacaactac ctagctttat caaacagtaa aggtgaattc ctgctaaatg
     3721 gagactttgt tgtctccatg tccaaaaggg aggtccgcgt ggggagcgcc gtcattgagt
     3781 acagcggatc ggacaatgtg gtggaaagac tgaactgtac ggaccgtatc gaggaagaac
     3841 ttctccttca ggtgttgtcc gtgggaaagc tgtataaccc agatgtgcgg tactcattca
     3901 atattcccat tgaggacaaa cctcagcaat tttactggaa cagtcacggg ccgtggcaag
     3961 catgcagcaa gccctgccaa ggggagcgga gacgaaaact tgtttgcacc agggagtctg
     4021 atcagctaac cgtttctgat caaagatgtg accggctgcc ccagccagga cctgtcactg
     4081 aagcgtgcgg cacagactgt gacttgaggt ggcacgttgc cagcaagagc gaatgcagtg
     4141 cccagtgtgg tttgggctac cgtactttag acatccactg tgccaaatac agcaggatgg
     4201 acgggaagac ggagaaggtg gatgacagtt tctgtagcag tcaacccaga ccgagtaacc
     4261 aggagaaatg ctcaggagag tgcagcacag gtggatggcg ctattcagcc tggaccgaat
     4321 gttctagaag ctgtgatggt ggtacccaga gaagaagagc aatttgtgtc aacacccgca
     4381 atgatgtcct ggatgacagc aaatgcacac accaggagaa agtcgtagta cagagctgca
     4441 atgagttctc ctgtccccat tggaaaacag gagactggtc agagtgcttg gtcacctgtg
     4501 ggaaagggca taagcaccgc caggtctggt gtcagtttgg cgaagatcga ttaagcgata
     4561 gaatgtgtga ccctgaggcc aagccggagc ccatgcagac gtgtcagcag ccagagtgtg
     4621 cagcttggca ggcgggtccc tggggacagt gcagtgtcac ttgtggacag ggataccagc
     4681 taagggcagt gaagtgcatc atggggactt atatgtcagt ggtcgatgac aatgactgta
     4741 acgcagcaac taggccaacc gacacccagg actgtgaatt agcatcttgc cacccttcca
     4801 tactggctct ggaaccaagg agaaatgcac agagtatacc gagaacccag tggcgatttg
     4861 ggtcttggac tccatgctca gccacttgtg gaaaaggtac ccggatgaga tacgtcagct
     4921 gccgggacga ggacggctct gtggctgatg agagtgcctg tgctacctta cctaaaccag
     4981 tagccaagga agagtgttct gtgacaccct gtggacagtg gaaggctcta gactggagct
     5041 cttgttccgt gacttgtggg caaggtaagg caacccgaca agtagtgtgt gtcaactaca
     5101 gcgaccatgt gattgatcga agtgagtgtg acccagatta catccccgag actgaccagg
     5161 actgctccat gtcaccgtgc cctcaatgga ctggcttggc tcacccattt caaaacgagg
     5221 acttccgtcc caggagtgac agccctagcc gcacccacgt gcttggaggg aaccagtgga
     5281 gaaccgggcc ctggggagca tgttctagta cctgcgccgg aggctcccag aggcgagtgg
     5341 tggtgtgtca ggatgaaaac ggatacacag ccaatgactg tgtagagaga atcaaacctg
     5401 atgaacagag agcctgtgaa tctggcccgt gtccccaatg ggcttacggc agctggggag
     5461 agtgtaccaa gctgtgtggt ggaggcatgc ggacaagact ggtggtctgt cagcgggcca
     5521 acggtgaccg attcccagac ttgagttgtg aagtcctgga caaacctact gaccgtgagc
     5581 agtgcaacac acatgcttgt ccacaagatg ctgcatggag tactggccca tggagctcgt
     5641 gttctgtctc ttgtggtcga gggcataaac atcgaaatgt ttactgcttg gcaaaagatg
     5701 gaagccattt agagagtgat aactgtaagc accttcctaa gccacatggg cacagaaggt
     5761 gccgaggagg acggtgcccc agatggaagg ctggcgcatg gagtcagtgt accaagacgt
     5821 gtggcgaagg ctcccggtac cggcaggtgg tatgcgtagc agaggaccaa agtgaggtgc
     5881 acagcacaca ctgtgactca gaccagcggc ctccagaccg tgagagctgc agcctacagc
     5941 cctgcgagta cgtgtggatc acaggagaat ggtctgagtg ctcagtgacc tgtggaaagg
     6001 gctacaggca aaggctggtc tcctgcagtg agatttatac cggcaaggag aattatgaat
     6061 acagctacca aaccacagtg aactgcccag gcgcccagcc gcccagcgtc catccctgct
     6121 acttgaggga ctgtcctgtc tcggccacct ggagagttgg caactggggc agttgctcag
     6181 tgtcctgcgg cataggagtc atgcatagat ctgtgcagtg tttaactaat gaagaccaac
     6241 ccagccactt atgccccact gatacgaagc cagaagaaag aaaagcctgc cgcaatgttt
     6301 ataactgtga gctaccccag aactgcaagg aggtaaaaaa actcaacagc gccagcgttg
     6361 atggggagta tttcctggct gtcagaggga agccgctaaa ggtattctgt gcagggatga
     6421 attctgacta tcccaaggag tatgtgacac tggctcacgg tgactcagag aacttctccg
     6481 aagtttatgg tcacagattg cacaacccaa cagaatgtcc ctataatggg agccggcgag
     6541 atgactgcca ttgccggaag gactacacag ctgctggctt ttccagtttc cagaaaatcc
     6601 gactcgacct gaccagcatg cagattataa ccactgactt agagtttgca aggacaagtg
     6661 aaggacatcc tgttcctttt gccaccgctg gggactgcta cagtgctgcc aaatgtccac
     6721 aggggcgctt tagcatcaac ctttatggga ctgggctgtc tttaacggag tctgccagat
     6781 ggacgtcaca agggaattac gctgtttcgg acatcaagaa gtctccggat ggtacccggg
     6841 tcgtagggaa atgcggcggt tactgtggaa agtgtacccc atcctccggc actggcctgg
     6901 aggtgcgagt ttcataacta aggggctctg aagaggaagc cataggagac ggatgaagga
     6961 tagtaattca atacctccac cttgaatttg ggtgcatctg tgtgcgtgtg tgtggatctg
     7021 tctgcgcgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgaa tgtgtgtgta tatgtgtgta
     7081 catatgcata tatataaata tatattatat atatatatat atacaggttg agcatccctt
     7141 atttaaaatt ttaagctctg aaatgctcca aattctgaaa acttttgagt gctagcatga
     7201 gatctcaaat ggtaaatttc atgccatgaa actttgcttc atacacaaat ttttataagt
     7261 accatataaa attatatttc tgccatgcat gtaaagtttc ctaagaaaca gaaaggagac
     7321 acacaaccca cattcttggg catggcttgc tctcttcctg agttccctac tgcttaaacc
     7381 ctacgctaaa atctcctagt aaactacaac tccgttcaaa aggaagaggc ataaattaat
     7441 agcatgttta gatgagcccc atcccaaaaa gatctcatct taaatatgaa aatatcgcca
     7501 agtcttcaaa atgtctgaaa tacacactga tggtctcaag catttcaatg agggatactc
     7561 aacctgcgga acaccctaat gatgtaaagt ttaatattta tgtttgaaat tatttattgt
     7621 gatgtaatat ttttgtacgt aaaatgattt tattatgact gcctgtgcat gatcctcccc
     7681 cttgcagtca gacagctgca ttttacgtac tctacattat atgtagtata tgacaaagtg
     7741 actcttcgtt atcacggtac actgttgttt actttttacc tggaaatgtg ttttactgtt
     7801 acattttgaa aatttttgta attatttttt taacaaccta gctgacatca aggtgctatg
     7861 tgggttgaat aagggtattt ttggcaattg tggggacgtt tcattagcca atgagtaagt
     7921 tagcaacatc acaggttgta ccaactgttc atcatagtct ttattccgtt tcatgtgatc
     7981 tctgggaaga attgtgctgc cttggtgcta atattatatg tttttaaagt aattgtcaga
     8041 gtcaaaactg taaacactta acaaaaggga gcaagaaata gattatcccc aatggataaa
     8101 atcacttgct agagtaagac ctactattta ctcttctttt tagacctgtc tttttttttt
     8161 taatagtagc tggactcttg tcttactgtt gttgttggta atatgatcta ctctgctcca
     8221 tggtgccttg gactcctgtc aatcattggg agggtccacc aaaagcttca ttacagagtg
     8281 acactgggaa aggaggctct cctgctgttt tgtcacgata tcctccaagt ttatgagcag
     8341 caacacaaag gatctaccac aggtgtatgg ccttaacacc cctcagcata ctcagagaac
     8401 gacaggagat cgaccacctt ttacctgaaa actttggcca atgatatgac ttcccttgag
     8461 gctgggagcc taataccctg ccgggtttcc tgtggtcttc agcgtttgtg tgaaaaaaca
     8521 aactggtgtc taagatgccc aggtctttct gatcttccac gaatccacct tttgttactt
     8581 ctttcaggaa tgaacgtgct gaggcagtgg tcacaagaca ttttacttga gaaagcctga
     8641 ccaagctttc caagaccaaa gagattagga aaaccctgac agtattcccc aactccacag
     8701 aaatgccaga gcacttggtg tttgaacaag tgtcattttt ctattgttaa tacatgtgaa
     8761 acatattata aataaatatt gtgaccacat ccaaaccata
//
