LOCUS       XM_006505261            8806 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ADAM metallopeptidase with thrombospondin
            type 1 motif 9 (Adamts9), transcript variant X3, mRNA.
ACCESSION   XM_006505261
VERSION     XM_006505261.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006505261.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8806
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..8806
                     /gene="Adamts9"
                     /gene_synonym="1810011L16Rik; 8430403M15Rik;
                     E030027K14Rik; Gsfund3; Mhdaund3; Mhdaund4; UND3; UND4"
                     /note="ADAM metallopeptidase with thrombospondin type 1
                     motif 9; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 16 ESTs, 298 long SRA
                     reads, and 97% coverage of the annotated genomic feature
                     by RNAseq alignments, including 26 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:101401"
                     /db_xref="MGI:MGI:1916320"
     CDS             1296..6923
                     /gene="Adamts9"
                     /gene_synonym="1810011L16Rik; 8430403M15Rik;
                     E030027K14Rik; Gsfund3; Mhdaund3; Mhdaund4; UND3; UND4"
                     /codon_start=1
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X3"
                     /protein_id="XP_006505324.1"
                     /db_xref="GeneID:101401"
                     /db_xref="MGI:MGI:1916320"
                     /translation="MQLVSWATLLTLLVPDLVEMRSPDSAAAVRKDRLHPRQVKLLES
                     LSEYEIASPIRVNPLGEPFPTNVHFKRRRRSINSASDPWPAFASSSSSSTSSQEHYRL
                     SAFGQQFLFNLTAHTGFIAPLFTVTLLGEPGVNQTKLYSEEEMELRHCFYKGHVNTKS
                     EHTAVISLCSGMMGTFRSHDGDYFIEPLQSVDEQEDEEEQNKPHIIYRHSTPQREPST
                     GKHACATSELKNSHSKDKRKIRMRKRRKRNSLADDVALLKSGLATKVLSGYSNQTNST
                     RDRWNHKRTKRFLSYPRFVEVMVVADHRMVLYHGANLQHYILTLMSIVASIYKDSSIG
                     NLINIVIVNLVVIHNEQEGPYINFNAQTTLKNFCQWQHSKNYLGGIQHDTAVLVTRED
                     ICRAQDKCDTLGLAELGTICDPYRSCSISEDSGLSTAFTIAHELGHVFNMPHDDSNKC
                     KEEGVKSPQHVMAPTLNFYTNPWMWSKCSRKYITEFLDTGYGECLLNEPASRTYPLPS
                     QLPGLLYNVNKQCELIFGPGSQVCPYMMQCRRLWCNNVDGAHKGCRTQHTPWADGTEC
                     EPGKHCKFGFCVPKEMEGPAIDGSWGGWSHFGTCSRTCGGGIKTAIRECNRPEPKNGG
                     KYCVGRRMKFKSCNTEPCMKQKRDFREEQCAHFDGKHFNINGLLPSVRWVPKYSGILM
                     KDRCKLFCRVAGNTAYYQLRDRVIDGTPCGQDTNDICVQGLCRQAGCDHILNSKARKD
                     KCGICGGDNSSCKTVAGTFNTVHYGYNTVVRIPAGATSIDVRQHSFSGKSEDDNYLAL
                     SNSKGEFLLNGDFVVSMSKREVRVGSAVIEYSGSDNVVERLNCTDRIEEELLLQVLSV
                     GKLYNPDVRYSFNIPIEDKPQQFYWNSHGPWQACSKPCQGERRRKLVCTRESDQLTVS
                     DQRCDRLPQPGPVTEACGTDCDLRWHVASKSECSAQCGLGYRTLDIHCAKYSRMDGKT
                     EKVDDSFCSSQPRPSNQEKCSGECSTGGWRYSAWTECSRSCDGGTQRRRAICVNTRND
                     VLDDSKCTHQEKVVVQSCNEFSCPHWKTGDWSECLVTCGKGHKHRQVWCQFGEDRLSD
                     RMCDPEAKPEPMQTCQQPECAAWQAGPWGQCSVTCGQGYQLRAVKCIMGTYMSVVDDN
                     DCNAATRPTDTQDCELASCHPSILALEPRRNAQSIPRTQWRFGSWTPCSATCGKGTRM
                     RYVSCRDEDGSVADESACATLPKPVAKEECSVTPCGQWKALDWSSCSVTCGQGKATRQ
                     VVCVNYSDHVIDRSECDPDYIPETDQDCSMSPCPQWTGLAHPFQNEDFRPRSDSPSRT
                     HVLGGNQWRTGPWGACSSTCAGGSQRRVVVCQDENGYTANDCVERIKPDEQRACESGP
                     CPQWAYGSWGECTKLCGGGMRTRLVVCQRANGDRFPDLSCEVLDKPTDREQCNTHACP
                     QDAAWSTGPWSSCSVSCGQGVQQRHVGCQIGTHKAARESECSSYSRPESERVCQASPC
                     PLYTWRAEQWQQCTKTCGEGSRYRQVVCVAEDQSEVHSTHCDSDQRPPDRESCSLQPC
                     EYVWITGEWSECSVTCGKGYRQRLVSCSEIYTGKENYEYSYQTTVNCPGAQPPSVHPC
                     YLRDCPVSATWRVGNWGSCSVSCGIGVMHRSVQCLTNEDQPSHLCPTDTKPEERKACR
                     NVYNCELPQNCKEVKKLNSASVDGEYFLAVRGKPLKVFCAGMNSDYPKEYVTLAHGDS
                     ENFSEVYGHRLHNPTECPYNGSRRDDCHCRKDYTAAGFSSFQKIRLDLTSMQIITTDL
                     EFARTSEGHPVPFATAGDCYSAAKCPQGRFSINLYGTGLSLTESARWTSQGNYAVSDI
                     KKSPDGTRVVGKCGGYCGKCTPSSGTGLEVRVS"
ORIGIN      
        1 ttcgagtgcc ttccccggga cctatggcct cacagtcctt ccctactccc ttcccctcaa
       61 atgtcgggca gagttggggg cttccaagtc cccaccctct ctaaccgcac agtaagcgtc
      121 ttaacctttt tttggggggg ggggggctac agaaacctgt agagctctcg ccacagggac
      181 agaggtcccg ggaagacccg ggtttaaaca gttgcgaaac tttcagagaa ctgcggatca
      241 gaaacacaac tagaactact ggactgaaat agatccctgc ctttaaaact cttgacttgg
      301 ggcaattaag tagagtggag ctcaggtgac aaatctggtt catagtgatc aagtgtagga
      361 ctaggacggc gcaaggctac tttttttttt ttttttcctc ttgtaaggaa tgccaagttg
      421 ggtgatggaa agagacgggg gcagaatgaa gaggacaggc agatacggag aagtggagat
      481 ggctcagtag aaagcggaga aggaagagac catcagagaa aagggacatg ggcccaaaga
      541 gacctacacc aagacctggc gagagagaga ttccaaaccg gagaccaaag taggaaaggg
      601 gaatcggagt gggtggctga gcgccacctc agagagagag aactttctct gctctccctc
      661 cttctcaggg aatctctgct aaccccacct cggggaggtg acgcggacgg ccaccgattg
      721 ctccggcact gccggcgcct ctggcctccg cctccggcag ctggaggggc ctaaagcggt
      781 gagtcctggc acccgcggcc gaggagggga caggatctac aaggaggcgg gccgcctgcc
      841 ccgttttctc ctcccctctc ctcctcctgg aggcgtgcac ctagggtatt tgagcgcccg
      901 cgggggcccc cgccccctgg ccccccattc aagaagcggc tcggctaact cagccagcaa
      961 agggcgcccg gcgcgcctcg gagcgcacgt tccgcgcctt ctcctgcccg caggctggac
     1021 attatgcggc cgagccgccg agccctagtc ctccgcctcc ttctcctcct cctgcggccc
     1081 gagcgcctca gctcacggca ggcggcagcg ttgctcagcg gagcgcagac gggaccctct
     1141 ctgcaggacc tcagcgactc ctaaagtcaa aaagttggcg gcagggcgcc ggggttccgc
     1201 gcgctctcca aggctgctgc ctcgcgtcgc cgccagccac caaagccggc aggagggagg
     1261 gggtgggaga agcgggggga ggggtgagga gcaccatgca gttagtatcc tgggccacac
     1321 tgctaacgct cctggtgccg gacctggttg agatgaggag ccctgactcc gcggcggccg
     1381 tgcgcaagga caggctgcac ccgaggcaag tgaaattatt agagagtctg agcgaatatg
     1441 agatcgcgtc tcccatccga gtgaaccccc tcggggaacc ctttcccacg aacgtgcact
     1501 tcaaaagaag gcggcgaagc attaactctg cctctgaccc ctggcctgcc ttcgcctcct
     1561 cttcgtcttc ctctacctct tcccaggagc actaccgcct ctcagccttc ggccagcagt
     1621 ttctatttaa tctcaccgcc cataccggat ttatcgctcc actgttcact gtcaccctcc
     1681 ttggagagcc aggggtaaac cagaccaagc tgtattccga ggaggaaatg gaacttaggc
     1741 actgtttcta caaaggccat gtcaatacca agtccgagca cactgcggtc atcagcctgt
     1801 gctccggaat gatgggcacg ttccgctctc acgatggaga ttatttcatt gaaccactgc
     1861 agtctgtgga tgagcaagag gatgaagagg aacaaaacaa accccacatt atttataggc
     1921 acagcacccc tcagagggaa ccctccacag gaaagcatgc ctgtgccacc tcagaactca
     1981 aaaatagtca cagtaaagac aagcggaaaa tcagaatgcg aaaacggaga aagaggaata
     2041 gcctggctga cgacgtggca ctgctaaaga gcggtttggc aacaaaggtg ctctctggct
     2101 atagcaacca gacaaacagc acaagggaca gatggaacca caaaagaacc aaacgctttc
     2161 tgtcctaccc acggtttgta gaggtgatgg tggtggctga ccacaggatg gttttatacc
     2221 acggagcaaa ccttcaacat tatatcttaa ccttaatgtc cattgtagct tctatctata
     2281 aagactcaag tattggaaat ttaattaata ttgttattgt gaacttagtt gtgattcata
     2341 atgaacagga aggaccttac ataaatttca atgcccagac aacattaaag aacttttgcc
     2401 agtggcagca ctcaaagaac tacttgggtg ggattcagca cgacacagcc gttctggtca
     2461 caagggaaga tatctgcaga gctcaggaca aatgtgacac cttaggtctt gctgaactgg
     2521 gaaccatttg cgacccctac cgaagctgtt ccattagtga agacagtggg ctgagcacag
     2581 ctttcacaat agctcacgag ctgggccatg tgtttaatat gcctcacgat gacagcaata
     2641 aatgcaaaga agaaggagtt aagagtcccc agcatgtcat ggcaccaaca ctgaacttct
     2701 acaccaaccc ctggatgtgg tcaaagtgca gtcggaaata catcactgag ttcctagaca
     2761 ctgggtacgg agagtgcttg ctgaatgaac ctgcatccag gacctatcct ttgccttccc
     2821 aactgcccgg ccttctctac aacgtgaata aacaatgtga actgattttt gggccaggct
     2881 ctcaagtgtg cccctatatg atgcagtgca gacggctctg gtgcaataat gtggatggag
     2941 cacacaaagg ctgcaggact cagcacacgc cctgggcaga tggaaccgag tgtgagcctg
     3001 gaaagcactg caagtttgga ttttgtgttc ccaaagaaat ggagggccct gcaattgatg
     3061 gatcctgggg aggttggagc cactttggga cctgctcaag aacgtgtgga ggaggcatca
     3121 aaacagccat cagagagtgc aacagaccag agccaaaaaa tggtgggaag tactgtgtag
     3181 gaaggagaat gaagttcaaa tcctgcaaca cggagccctg catgaagcag aagcgagact
     3241 tccgagagga gcagtgtgct cactttgatg gcaaacactt caacatcaat ggtctgctgc
     3301 ccagcgtacg ctgggttcct aagtacagcg gaattttgat gaaggaccgg tgcaagttgt
     3361 tctgcagagt ggcaggaaac acagcctact accagctccg agacagagtg attgacggaa
     3421 ccccctgtgg ccaggacaca aatgacatct gtgtccaagg cctttgccgg caagctggat
     3481 gtgatcatat tttaaactca aaggcccgga aagataaatg tgggatttgt ggtggagata
     3541 attcttcatg caaaacagtg gcaggaacat ttaacactgt ccattatggt tacaatactg
     3601 ttgtccgaat tccggctggt gctaccagca ttgacgtgcg tcagcacagc ttctcaggga
     3661 agtctgagga tgacaactac ctagctttat caaacagtaa aggtgaattc ctgctaaatg
     3721 gagactttgt tgtctccatg tccaaaaggg aggtccgcgt ggggagcgcc gtcattgagt
     3781 acagcggatc ggacaatgtg gtggaaagac tgaactgtac ggaccgtatc gaggaagaac
     3841 ttctccttca ggtgttgtcc gtgggaaagc tgtataaccc agatgtgcgg tactcattca
     3901 atattcccat tgaggacaaa cctcagcaat tttactggaa cagtcacggg ccgtggcaag
     3961 catgcagcaa gccctgccaa ggggagcgga gacgaaaact tgtttgcacc agggagtctg
     4021 atcagctaac cgtttctgat caaagatgtg accggctgcc ccagccagga cctgtcactg
     4081 aagcgtgcgg cacagactgt gacttgaggt ggcacgttgc cagcaagagc gaatgcagtg
     4141 cccagtgtgg tttgggctac cgtactttag acatccactg tgccaaatac agcaggatgg
     4201 acgggaagac ggagaaggtg gatgacagtt tctgtagcag tcaacccaga ccgagtaacc
     4261 aggagaaatg ctcaggagag tgcagcacag gtggatggcg ctattcagcc tggaccgaat
     4321 gttctagaag ctgtgatggt ggtacccaga gaagaagagc aatttgtgtc aacacccgca
     4381 atgatgtcct ggatgacagc aaatgcacac accaggagaa agtcgtagta cagagctgca
     4441 atgagttctc ctgtccccat tggaaaacag gagactggtc agagtgcttg gtcacctgtg
     4501 ggaaagggca taagcaccgc caggtctggt gtcagtttgg cgaagatcga ttaagcgata
     4561 gaatgtgtga ccctgaggcc aagccggagc ccatgcagac gtgtcagcag ccagagtgtg
     4621 cagcttggca ggcgggtccc tggggacagt gcagtgtcac ttgtggacag ggataccagc
     4681 taagggcagt gaagtgcatc atggggactt atatgtcagt ggtcgatgac aatgactgta
     4741 acgcagcaac taggccaacc gacacccagg actgtgaatt agcatcttgc cacccttcca
     4801 tactggctct ggaaccaagg agaaatgcac agagtatacc gagaacccag tggcgatttg
     4861 ggtcttggac tccatgctca gccacttgtg gaaaaggtac ccggatgaga tacgtcagct
     4921 gccgggacga ggacggctct gtggctgatg agagtgcctg tgctacctta cctaaaccag
     4981 tagccaagga agagtgttct gtgacaccct gtggacagtg gaaggctcta gactggagct
     5041 cttgttccgt gacttgtggg caaggtaagg caacccgaca agtagtgtgt gtcaactaca
     5101 gcgaccatgt gattgatcga agtgagtgtg acccagatta catccccgag actgaccagg
     5161 actgctccat gtcaccgtgc cctcaatgga ctggcttggc tcacccattt caaaacgagg
     5221 acttccgtcc caggagtgac agccctagcc gcacccacgt gcttggaggg aaccagtgga
     5281 gaaccgggcc ctggggagca tgttctagta cctgcgccgg aggctcccag aggcgagtgg
     5341 tggtgtgtca ggatgaaaac ggatacacag ccaatgactg tgtagagaga atcaaacctg
     5401 atgaacagag agcctgtgaa tctggcccgt gtccccaatg ggcttacggc agctggggag
     5461 agtgtaccaa gctgtgtggt ggaggcatgc ggacaagact ggtggtctgt cagcgggcca
     5521 acggtgaccg attcccagac ttgagttgtg aagtcctgga caaacctact gaccgtgagc
     5581 agtgcaacac acatgcttgt ccacaagatg ctgcatggag tactggccca tggagctcgt
     5641 gctctgtgtc ctgtggccaa ggcgtgcagc agaggcatgt gggctgtcag atcgggacac
     5701 acaaagcagc cagagagagt gagtgcagct cctacagcag accagagtcg gagcgtgtct
     5761 gccaagcctc accatgtcct ctctacactt ggagggcaga gcagtggcaa caatgtacca
     5821 agacgtgtgg cgaaggctcc cggtaccggc aggtggtatg cgtagcagag gaccaaagtg
     5881 aggtgcacag cacacactgt gactcagacc agcggcctcc agaccgtgag agctgcagcc
     5941 tacagccctg cgagtacgtg tggatcacag gagaatggtc tgagtgctca gtgacctgtg
     6001 gaaagggcta caggcaaagg ctggtctcct gcagtgagat ttataccggc aaggagaatt
     6061 atgaatacag ctaccaaacc acagtgaact gcccaggcgc ccagccgccc agcgtccatc
     6121 cctgctactt gagggactgt cctgtctcgg ccacctggag agttggcaac tggggcagtt
     6181 gctcagtgtc ctgcggcata ggagtcatgc atagatctgt gcagtgttta actaatgaag
     6241 accaacccag ccacttatgc cccactgata cgaagccaga agaaagaaaa gcctgccgca
     6301 atgtttataa ctgtgagcta ccccagaact gcaaggaggt aaaaaaactc aacagcgcca
     6361 gcgttgatgg ggagtatttc ctggctgtca gagggaagcc gctaaaggta ttctgtgcag
     6421 ggatgaattc tgactatccc aaggagtatg tgacactggc tcacggtgac tcagagaact
     6481 tctccgaagt ttatggtcac agattgcaca acccaacaga atgtccctat aatgggagcc
     6541 ggcgagatga ctgccattgc cggaaggact acacagctgc tggcttttcc agtttccaga
     6601 aaatccgact cgacctgacc agcatgcaga ttataaccac tgacttagag tttgcaagga
     6661 caagtgaagg acatcctgtt ccttttgcca ccgctgggga ctgctacagt gctgccaaat
     6721 gtccacaggg gcgctttagc atcaaccttt atgggactgg gctgtcttta acggagtctg
     6781 ccagatggac gtcacaaggg aattacgctg tttcggacat caagaagtct ccggatggta
     6841 cccgggtcgt agggaaatgc ggcggttact gtggaaagtg taccccatcc tccggcactg
     6901 gcctggaggt gcgagtttca taactaaggg gctctgaaga ggaagccata ggagacggat
     6961 gaaggatagt aattcaatac ctccaccttg aatttgggtg catctgtgtg cgtgtgtgtg
     7021 gatctgtctg cgcgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgaatgtg tgtgtatatg
     7081 tgtgtacata tgcatatata taaatatata ttatatatat atatatatac aggttgagca
     7141 tcccttattt aaaattttaa gctctgaaat gctccaaatt ctgaaaactt ttgagtgcta
     7201 gcatgagatc tcaaatggta aatttcatgc catgaaactt tgcttcatac acaaattttt
     7261 ataagtacca tataaaatta tatttctgcc atgcatgtaa agtttcctaa gaaacagaaa
     7321 ggagacacac aacccacatt cttgggcatg gcttgctctc ttcctgagtt ccctactgct
     7381 taaaccctac gctaaaatct cctagtaaac tacaactccg ttcaaaagga agaggcataa
     7441 attaatagca tgtttagatg agccccatcc caaaaagatc tcatcttaaa tatgaaaata
     7501 tcgccaagtc ttcaaaatgt ctgaaataca cactgatggt ctcaagcatt tcaatgaggg
     7561 atactcaacc tgcggaacac cctaatgatg taaagtttaa tatttatgtt tgaaattatt
     7621 tattgtgatg taatattttt gtacgtaaaa tgattttatt atgactgcct gtgcatgatc
     7681 ctcccccttg cagtcagaca gctgcatttt acgtactcta cattatatgt agtatatgac
     7741 aaagtgactc ttcgttatca cggtacactg ttgtttactt tttacctgga aatgtgtttt
     7801 actgttacat tttgaaaatt tttgtaatta tttttttaac aacctagctg acatcaaggt
     7861 gctatgtggg ttgaataagg gtatttttgg caattgtggg gacgtttcat tagccaatga
     7921 gtaagttagc aacatcacag gttgtaccaa ctgttcatca tagtctttat tccgtttcat
     7981 gtgatctctg ggaagaattg tgctgccttg gtgctaatat tatatgtttt taaagtaatt
     8041 gtcagagtca aaactgtaaa cacttaacaa aagggagcaa gaaatagatt atccccaatg
     8101 gataaaatca cttgctagag taagacctac tatttactct tctttttaga cctgtctttt
     8161 tttttttaat agtagctgga ctcttgtctt actgttgttg ttggtaatat gatctactct
     8221 gctccatggt gccttggact cctgtcaatc attgggaggg tccaccaaaa gcttcattac
     8281 agagtgacac tgggaaagga ggctctcctg ctgttttgtc acgatatcct ccaagtttat
     8341 gagcagcaac acaaaggatc taccacaggt gtatggcctt aacacccctc agcatactca
     8401 gagaacgaca ggagatcgac caccttttac ctgaaaactt tggccaatga tatgacttcc
     8461 cttgaggctg ggagcctaat accctgccgg gtttcctgtg gtcttcagcg tttgtgtgaa
     8521 aaaacaaact ggtgtctaag atgcccaggt ctttctgatc ttccacgaat ccaccttttg
     8581 ttacttcttt caggaatgaa cgtgctgagg cagtggtcac aagacatttt acttgagaaa
     8641 gcctgaccaa gctttccaag accaaagaga ttaggaaaac cctgacagta ttccccaact
     8701 ccacagaaat gccagagcac ttggtgtttg aacaagtgtc atttttctat tgttaataca
     8761 tgtgaaacat attataaata aatattgtga ccacatccaa accata
//
