LOCUS       NM_175419               2381 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus ARP5 actin-related protein 5 (Actr5), mRNA.
ACCESSION   NM_175419
VERSION     NM_175419.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Morita,T. and Hayashi,K.
  TITLE     Actin-related protein 5 suppresses the cooperative activation of
            cardiac gene transcription by myocardin and MEF2
  JOURNAL   FEBS Open Bio 13 (2), 363-379 (2023)
   PUBMED   36610028
  REMARK    GeneRIF: Actin-related protein 5 suppresses the cooperative
            activation of cardiac gene transcription by myocardin and MEF2.
REFERENCE   3  (bases 1 to 2381)
  AUTHORS   Morita,T. and Hayashi,K.
  TITLE     Actin-related protein 5 functions as a novel modulator of MyoD and
            MyoG in skeletal muscle and in rhabdomyosarcoma
  JOURNAL   Elife 11, e77746 (2022)
   PUBMED   35348112
  REMARK    GeneRIF: Actin-related protein 5 functions as a novel modulator of
            MyoD and MyoG in skeletal muscle and in rhabdomyosarcoma.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2381)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 2381)
  AUTHORS   Min,J.N., Tian,Y., Xiao,Y., Wu,L., Li,L. and Chang,S.
  TITLE     The mINO80 chromatin remodeling complex is required for efficient
            telomere replication and maintenance of genome stability
  JOURNAL   Cell Res 23 (12), 1396-1413 (2013)
   PUBMED   23979016
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK142980.1 and CR516445.1.
            
            On Apr 6, 2006 this sequence version replaced NM_175419.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK142980.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-932               AK142980.1         2-933
            933-2039            AK142980.1         935-2041
            2040-2080           AK142980.1         2043-2083
            2081-2357           AK142980.1         2085-2361
            2358-2381           CR516445.1         1-24                c
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 78.72 cM"
     gene            1..2381
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /note="ARP5 actin-related protein 5"
                     /db_xref="GeneID:109275"
                     /db_xref="MGI:MGI:1924748"
     exon            1..604
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..2056
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /note="ARP5 actin-related protein 5 homolog"
                     /codon_start=1
                     /product="actin-related protein 5"
                     /protein_id="NP_780628.3"
                     /db_xref="CCDS:CCDS38310.1"
                     /db_xref="GeneID:109275"
                     /db_xref="MGI:MGI:1924748"
                     /translation="MEANVFRFRDARSAPDPVLEAGPVAFGSQPVPLVLDNGSFQARA
                     GWACPGPDPGPEPRLQFRAVCARGRGGARGGPGPQVGNALGSLEPLRWMLRSPFDRNV
                     PVNLELQELLLDYSFQHLGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYRIPK
                     VAYGIDSLFSFYHNVPKNALSSGLIISSGYQCTHILPVLEGRLDAKNCKRINLGGSQA
                     AGYLQRLLQLKYPGHLAAITLSRMEEILQEHSYIAEDYGAELQKWQCPDYYENNVHKM
                     QLPFSSKLLGSTLTAEEKQERRQQQLRRLQELNARRREEKLQLDQERLERLLYVQELL
                     EEGQMDQFHKALIELNMDSPEELQSYIQKLTLAVEQAKQKILQAEASLEVDVVDSKPE
                     TPDLEPLEPTMEDVENISDFEPLFSEETPEVEKPQVTTVQPVFNLAAYHQLSVGTERI
                     RAPEIIFQPSLIGEEQAGIAETLHFVLDRYPKAIQDTLVQNVFLTGGNVMYPGMKARV
                     EKELLEMRPFQSSFQVQLASNPVLDAWYGARDWALDHLEDSGAWVTRKDYEEKGGEYL
                     KEHCASNTYVPIRLPKQASRASETQTSGRGSSASGSGAGDQA"
     exon            605..834
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            835..1004
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1005..1222
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1405
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1406..1525
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1526..1665
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1666..1798
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1799..2377
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2364
                     /gene="Actr5"
                     /gene_synonym="B430109J19Rik"
                     /note="major polyA site"
ORIGIN      
        1 aaggaggctg ttgcggacaa gctggagcta cggttggact tgaggcctgg atcagcgggg
       61 aatagaaacc cacagaaagt tctggagcgc caggcgggaa tcaggtgctg aaaccagcga
      121 gtcctcccgt aaggaggagg cttccggacg cttcggggcc cagagactca gacgcggccc
      181 ggggtttcgt gacgcactcg gcttcggggc gggaccggcg ctggccaaga tggaggccaa
      241 cgtgttccgc ttccgagatg cccgctctgc tccggatccc gtgctcgaag ccgggccggt
      301 ggccttcggg tcgcagccgg tgcctctggt gctggacaac gggtcgttcc aggctcgggc
      361 cgggtgggcg tgccccgggc cggaccccgg tcccgagcct cgcctgcagt tccgcgccgt
      421 gtgtgcgcgc ggccgcggcg gggcgcgcgg cgggccgggg ccgcaggtgg gcaacgcgct
      481 gggaagcctg gagcctctgc gctggatgct gcgctcgccc ttcgatcgca acgtcccggt
      541 caacctggaa ctgcaggaac tgctgctgga ctacagcttc cagcacctcg gcgtctcctc
      601 gcagggctgc gttgatcatc ccatagttct gacagaggct gtgtgtaacc ccctctactc
      661 ccgtcaaatg atgtcggagc tccttttcga atgctacagg atcccgaagg ttgcctatgg
      721 gatagacagc ctcttcagct tctaccacaa cgtgcccaag aatgcccttt ccagcggcct
      781 catcatttca tccggctacc agtgcacaca catcttaccg gtcttggaag ggaggctcga
      841 tgccaaaaac tgcaagcgca tcaatcttgg aggaagtcag gcagctggct acctgcagcg
      901 gcttctccag ctgaagtatc caggccacct ggcagccatc acactcagcc gcatggagga
      961 gatcctgcag gagcatagct acattgccga ggactacggg gcagaattgc agaagtggca
     1021 gtgtcccgat tactacgaga acaatgtcca caagatgcag ctcccgttct ccagcaagct
     1081 cctgggcagc acactgacgg cggaggagaa gcaggagcgg cggcagcagc agctgcgccg
     1141 gctgcaagag ctcaacgccc ggcggaggga ggagaagctg cagctggatc aggagcggct
     1201 ggagcggctg ttgtatgtgc aggagctcct agaggaagga cagatggacc agtttcacaa
     1261 agctctgatc gagctgaaca tggactcccc agaagaactg cagtcctaca tacagaagct
     1321 caccttggcg gtggagcagg ccaaacagaa aatcctgcag gccgaagcca gcctggaggt
     1381 ggatgtggta gacagcaagc cagagacccc tgacctggag ccgctggaac ccaccatgga
     1441 ggatgtggag aacatcagtg atttcgagcc tttgttctcg gaggaaacgc ccgaagtgga
     1501 gaagccgcaa gtcaccacag tccagcccgt gtttaacttg gcagcgtatc atcagctgtc
     1561 tgttgggaca gagaggatcc gtgctccgga gattattttc cagccatccc tcataggaga
     1621 ggagcaggcg gggattgcag agaccctcca ttttgtcctg gacaggtacc caaaggccat
     1681 tcaggacacc ctggttcaga acgttttcct taccggtggg aacgtgatgt acccaggcat
     1741 gaaggcccga gtggagaagg agctgctgga gatgaggccc ttccagtcct ccttccaggt
     1801 tcagctcgcc tcgaaccctg tgctggatgc gtggtacggt gcccgtgact gggccttgga
     1861 tcacctagaa gacagtggag cctgggtcac caggaaggac tatgaagaaa aggggggcga
     1921 gtacctcaag gaacattgcg cctccaacac gtacgtcccc atccgcctgc ctaagcaggc
     1981 ctcacgtgcc tcagagacgc agacttccgg ccgaggctcc agcgccagtg gaagtggggc
     2041 tggtgatcag gcctagcagg ggggacgcca gatgaccttg tgcttcaccc ttgccatgga
     2101 ggcagtgttt gggacaagga cagtgcccca tggtgctgcc tgggtctgac agccttgttt
     2161 ggccagtgac tggatctccc ctgggagccc agcagaggag agcaggtgat ctacctcagt
     2221 gaaggacaca gtggcctctg gcaccaagaa ctgtggacaa gctgggggac tgccttcctc
     2281 agcagtgagg gaaacagctg gagggagaag tgggcagtgc tgctctttgc actgttttgt
     2341 tttgttttta aagctctaaa gttatccatg gagtgttaaa a
//
