LOCUS       NM_031404               1564 bp    mRNA    linear   ROD 04-OCT-2023
DEFINITION  Mus musculus actin-like 6B (Actl6b), mRNA.
ACCESSION   NM_031404
VERSION     NM_031404.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Fulton SL, Wenderski W, Lepack AE, Eagle AL, Fanutza T, Bastle RM,
            Ramakrishnan A, Hays EC, Neal A, Bendl J, Farrelly LA, Al-Kachak A,
            Lyu Y, Cetin B, Chan JC, Tran TN, Neve RL, Roper RJ, Brennand KJ,
            Roussos P, Schimenti JC, Friedman AK, Shen L, Blitzer RD, Robison
            AJ, Crabtree GR and Maze I.
  TITLE     Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn
            mouse model of Down syndrome
  JOURNAL   Nat Commun 13 (1), 6384 (2022)
   PUBMED   36289231
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1564)
  AUTHORS   Braun SMG, Petrova R, Tang J, Krokhotin A, Miller EL, Tang Y,
            Panagiotakos G and Crabtree GR.
  TITLE     BAF subunit switching regulates chromatin accessibility to control
            cell cycle exit in the developing mammalian cortex
  JOURNAL   Genes Dev 35 (5-6), 335-353 (2021)
   PUBMED   33602870
REFERENCE   4  (bases 1 to 1564)
  AUTHORS   Perera SN, Williams RM, Lyne R, Stubbs O, Buehler DP,
            Sauka-Spengler T, Noda M, Micklem G, Southard-Smith EM and Baker
            CVH.
  TITLE     Insights into olfactory ensheathing cell development from a
            laser-microdissection and transcriptome-profiling approach
  JOURNAL   Glia 68 (12), 2550-2584 (2020)
   PUBMED   32857879
REFERENCE   5  (bases 1 to 1564)
  AUTHORS   Nakano Y, Wiechert S, Fritzsch B and Banfi B.
  TITLE     Inhibition of a transcriptional repressor rescues hearing in a
            splicing factor-deficient mouse
  JOURNAL   Life Sci Alliance 3 (12), e202000841 (2020)
   PUBMED   33087486
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1564)
  AUTHORS   Xue Y, Canman JC, Lee CS, Nie Z, Yang D, Moreno GT, Young MK,
            Salmon ED and Wang W.
  TITLE     The human SWI/SNF-B chromatin-remodeling complex is related to
            yeast rsc and localizes at kinetochores of mitotic chromosomes
  JOURNAL   Proc Natl Acad Sci U S A 97 (24), 13015-13020 (2000)
   PUBMED   11078522
REFERENCE   7  (bases 1 to 1564)
  AUTHORS   Zhang HS, Gavin M, Dahiya A, Postigo AA, Ma D, Luo RX, Harbour JW
            and Dean DC.
  TITLE     Exit from G1 and S phase of the cell cycle is regulated by
            repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF
  JOURNAL   Cell 101 (1), 79-89 (2000)
   PUBMED   10778858
REFERENCE   8  (bases 1 to 1564)
  AUTHORS   Phelan ML, Sif S, Narlikar GJ and Kingston RE.
  TITLE     Reconstitution of a core chromatin remodeling complex from SWI/SNF
            subunits
  JOURNAL   Mol Cell 3 (2), 247-253 (1999)
   PUBMED   10078207
REFERENCE   9  (bases 1 to 1564)
  AUTHORS   Reyes JC, Muchardt C and Yaniv M.
  TITLE     Components of the human SWI/SNF complex are enriched in active
            chromatin and are associated with the nuclear matrix
  JOURNAL   J Cell Biol 137 (2), 263-274 (1997)
   PUBMED   9128241
REFERENCE   10 (bases 1 to 1564)
  AUTHORS   Wang W, Xue Y, Zhou S, Kuo A, Cairns BR and Crabtree GR.
  TITLE     Diversity and specialization of mammalian SWI/SNF complexes
  JOURNAL   Genes Dev 10 (17), 2117-2130 (1996)
   PUBMED   8804307
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC148018.3.
            
            [WARNING] On Nov 27, 2023 this sequence was replaced by
            NM_031404.6.
            
            On Aug 21, 2018 this sequence version replaced NM_031404.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049539.1, AB075226.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849379, SAMN00849389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               AC148018.3         185628-185741
            115-191             AC148018.3         186146-186222
            192-357             AC148018.3         186595-186760
            358-458             AC148018.3         187078-187178
            459-556             AC148018.3         195189-195286
            557-651             AC148018.3         196573-196667
            652-758             AC148018.3         196735-196841
            759-848             AC148018.3         197773-197862
            849-910             AC148018.3         198059-198120
            911-1025            AC148018.3         198612-198726
            1026-1106           AC148018.3         198879-198959
            1107-1202           AC148018.3         199055-199150
            1203-1289           AC148018.3         199339-199425
            1290-1564           AC148018.3         201388-201662
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 76.56 cM"
     gene            1..1564
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /note="actin-like 6B"
                     /db_xref="GeneID:83766"
                     /db_xref="MGI:MGI:1933548"
     exon            1..114
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..1370
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /note="actin-like 6; arpN-alpha; BRG1-associated factor
                     53B; actin-related protein Baf53b; 53 kDa BRG1-associated
                     factor B"
                     /codon_start=1
                     /product="actin-like protein 6B"
                     /protein_id="NP_113581.1"
                     /db_xref="CCDS:CCDS19770.1"
                     /db_xref="GeneID:83766"
                     /db_xref="MGI:MGI:1933548"
                     /translation="MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLL
                     AAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDH
                     TYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANG
                     RSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPY
                     MIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVA
                     AQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCD
                     IDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWI
                     GGSILASLGTFQQMWISKQEYEEGGKQCVERKCP"
     exon            115..191
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            192..357
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            358..458
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            459..556
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            557..651
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            652..758
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            759..848
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            849..910
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            911..1025
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            1026..1106
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..1202
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            1203..1289
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
     exon            1290..1564
                     /gene="Actl6b"
                     /gene_synonym="Actl6; ArpNa; Baf53b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccccgcccg ggatcccggg agctgtccgg ccgcctcggt gctgatcccg ccgccgccca
       61 cgggccgcga gcagcgtaga gagggcacta tgagcggggg cgtctacggc ggagatgagg
      121 tgggggcgct cgtctttgac attggctctt tctcagtccg agctgggtac gctggggagg
      181 actgccccaa ggctgacttc cccaccactg tggggctgct ggccgcagaa gaggggggcg
      241 ggctggagct ggagggggag aaagagaaga aagggaagat tttccacatc gacaccaatg
      301 ccctgcacgt gcctcgggat ggagcggagg tcatgtcgcc cctcaagaat ggcatgattg
      361 aggactggga gtgcttccga gccatcctgg atcataccta cagcaaacat gtcaagtccg
      421 agccaaacct gcacccagta ctcatgtcgg aggctccgtg gaacactcgg gccaagcggg
      481 agaagctgac ggagctgatg ttcgagcagt acaacattcc tgccttcttc ttatgcaaga
      541 cggccgtgct cacagccttt gcaaatggac gctccacagg cctggtgctg gacagtgggg
      601 ccacccacac tacagccatc ccagtccatg atggctatgt cctacagcaa ggcatcgtca
      661 agtcccccct ggcaggggac ttcatctcca tgcagtgccg ggagctcttc caggaaatgg
      721 ctattgatat cattcctcct tacatgattg cagccaagga gcctgtacgg gagggagccc
      781 ccccaaactg gaagaagaag gagaagctac cccaagtctc caagtcctgg cataactaca
      841 tgtgtaacga ggtgatccaa gacttccagg cctccgtact gcaggtgtct gattcccctt
      901 acgatgaaca ggtagctgca caaatgccca ctgtgcatta tgaaatgccc aatggctaca
      961 acacagacta cggcgctgag cgacttcgaa tccctgaggg cctgtttgat ccctctaatg
     1021 tcaagggcct gtccgggaat accatgctag gagtgggtca cgtggtcacc accagcatcg
     1081 gcatgtgtga cattgacatt cgcccgggtc tctatggcag tgtcattgtc actggcggca
     1141 acactctgct tcaggggttc acagacagac ttaatcggga gctttctcag aagaccccac
     1201 cgagcatgcg tcttaagctc atcgccagca acagcaccat ggaacgcaag ttcagcccct
     1261 ggattggagg ctccatcttg gcctcactgg gcacattcca gcagatgtgg atctccaaac
     1321 aggaatacga ggagggaggg aagcagtgcg tggagcggaa gtgcccctga agttgccccc
     1381 ctcccccaaa tacccgtcca ccccatccac ggagaaacgc cagaggggcg ttctaccagc
     1441 cagaaatcca aaagcgctga actctccctt tcccattacc ctcttctctc ttacccacat
     1501 cttcttagac tgtgatgttc ctgagttgaa agaagaaaaa aaaaaaagaa cttttatgaa
     1561 aatc
//
