LOCUS       NM_019673               1969 bp    mRNA    linear   ROD 06-FEB-2024
DEFINITION  Mus musculus actin-like 6A (Actl6a), mRNA.
ACCESSION   NM_019673 NM_183090
VERSION     NM_019673.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Fulton,S.L., Wenderski,W., Lepack,A.E., Eagle,A.L., Fanutza,T.,
            Bastle,R.M., Ramakrishnan,A., Hays,E.C., Neal,A., Bendl,J.,
            Farrelly,L.A., Al-Kachak,A., Lyu,Y., Cetin,B., Chan,J.C.,
            Tran,T.N., Neve,R.L., Roper,R.J., Brennand,K.J., Roussos,P.,
            Schimenti,J.C., Friedman,A.K., Shen,L., Blitzer,R.D., Robison,A.J.,
            Crabtree,G.R. and Maze,I.
  TITLE     Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn
            mouse model of Down syndrome
  JOURNAL   Nat Commun 13 (1), 6384 (2022)
   PUBMED   36289231
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Park,H.J., Tsai,E., Huang,D., Weaver,M., Frick,L., Alcantara,A.,
            Moran,J.J., Patzig,J., Melendez-Vasquez,C.V., Crabtree,G.R.,
            Feltri,M.L., Svaren,J. and Casaccia,P.
  TITLE     ACTL6a coordinates axonal caliber recognition and myelination in
            the peripheral nerve
  JOURNAL   iScience 25 (4), 104132 (2022)
   PUBMED   35434551
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1969)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1969)
  AUTHORS   Braun,S.M.G., Petrova,R., Tang,J., Krokhotin,A., Miller,E.L.,
            Tang,Y., Panagiotakos,G. and Crabtree,G.R.
  TITLE     BAF subunit switching regulates chromatin accessibility to control
            cell cycle exit in the developing mammalian cortex
  JOURNAL   Genes Dev 35 (5-6), 335-353 (2021)
   PUBMED   33602870
  REMARK    GeneRIF: BAF subunit switching regulates chromatin accessibility to
            control cell cycle exit in the developing mammalian cortex.
REFERENCE   5  (bases 1 to 1969)
  AUTHORS   Basta,J.M., Singh,A.P., Robbins,L., Stout,L., Pherson,M. and
            Rauchman,M.
  TITLE     The core SWI/SNF catalytic subunit Brg1 regulates nephron
            progenitor cell proliferation and differentiation
  JOURNAL   Dev Biol 464 (2), 176-187 (2020)
   PUBMED   32504627
REFERENCE   6  (bases 1 to 1969)
  AUTHORS   Zhang,H.S., Gavin,M., Dahiya,A., Postigo,A.A., Ma,D., Luo,R.X.,
            Harbour,J.W. and Dean,D.C.
  TITLE     Exit from G1 and S phase of the cell cycle is regulated by
            repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF
  JOURNAL   Cell 101 (1), 79-89 (2000)
   PUBMED   10778858
REFERENCE   7  (bases 1 to 1969)
  AUTHORS   Phelan,M.L., Sif,S., Narlikar,G.J. and Kingston,R.E.
  TITLE     Reconstitution of a core chromatin remodeling complex from SWI/SNF
            subunits
  JOURNAL   Mol Cell 3 (2), 247-253 (1999)
   PUBMED   10078207
REFERENCE   8  (bases 1 to 1969)
  AUTHORS   Zhao,K., Wang,W., Rando,O.J., Xue,Y., Swiderek,K., Kuo,A. and
            Crabtree,G.R.
  TITLE     Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF
            complex to chromatin after T lymphocyte receptor signaling
  JOURNAL   Cell 95 (5), 625-636 (1998)
   PUBMED   9845365
REFERENCE   9  (bases 1 to 1969)
  AUTHORS   Reyes,J.C., Muchardt,C. and Yaniv,M.
  TITLE     Components of the human SWI/SNF complex are enriched in active
            chromatin and are associated with the nuclear matrix
  JOURNAL   J Cell Biol 137 (2), 263-274 (1997)
   PUBMED   9128241
REFERENCE   10 (bases 1 to 1969)
  AUTHORS   Wang,W., Xue,Y., Zhou,S., Kuo,A., Cairns,B.R. and Crabtree,G.R.
  TITLE     Diversity and specialization of mammalian SWI/SNF complexes
  JOURNAL   Genes Dev 10 (17), 2117-2130 (1996)
   PUBMED   8804307
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CF725603.1, AK090154.1, AK002724.1 and CJ216077.1.
            
            [WARNING] On Apr 1, 2024 this sequence was replaced by NM_019673.3.
            
            On or before May 30, 2008 this sequence version replaced
            NM_183090.1, NM_019673.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660815.211627.1, AK169278.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-187               CF725603.1         1-187
            188-422             AK090154.1         7-241
            423-1005            AK002724.1         219-801
            1006-1704           AK090154.1         825-1523
            1705-1932           AK002724.1         1500-1727
            1933-1966           AK090154.1         1752-1785
            1967-1969           CJ216077.1         394-396
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 15.83 cM"
     gene            1..1969
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /note="actin-like 6A"
                     /db_xref="GeneID:56456"
                     /db_xref="MGI:MGI:1861453"
     exon            1..335
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            336..412
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            413..587
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            588..688
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            689..786
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            787..881
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            882..988
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            989..1078
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1140
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            1141..1255
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            1256..1336
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            1337..1432
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            1433..1519
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     exon            1520..1969
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1947..1952
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Actl6a"
                     /gene_synonym="2810432C06Rik; Actl6; ARP4; Baf53a"
                     /note="putative"
ORIGIN      
        1 cttcttctgt cgcttctccc tctccctgcc cctacggatg ccttccattg gctaagacgg
       61 ctaaaccgcg cggggatgca gcagcgccac actctgattg gctaatgact aagccggacc
      121 ctttgtcatt ggttgatacg agaaaccagc aagagtggct gtgcagcggg cgtgcggccg
      181 ctgctttgtt gccggagggg gcggcgttgg aagttgcagg cttgcggggc cggcgttctc
      241 agggagagga gtcacgccgc tgttatcttt cgtccggtag tcttcggcca gtccccgcca
      301 gacagtagcc atgagcggcg gcgtgtacgg cggagatgaa gttggcgctc ttgtttttga
      361 cattggatcg tacacagtga gggctggcta tgctggcgag gactgcccta aggttgattt
      421 ccccacggct atcggtgtgg tgctggagag agatgacgga agtacaatga tggagattga
      481 tggtgacaaa ggcaagcagg gcgggcccac ctactacata gacaccaatg ccctccgcgt
      541 gcccagggag aacatggagg ccatctcacc actcaagaat ggcatggttg aagactggga
      601 tagtttccag gccattttgg atcatacata caagatgcat gtcaaatccg aagccagcct
      661 gcatcctgtt ctcatgtcgg aagcaccgtg gaacaccagg gcgaagagag agaaactgac
      721 agagttgatg tttgagcact acagcatccc tgcattcttc ctttgcaaaa ctgcagtttt
      781 gacggcattt gctaatggtc gttctactgg gctgattttg gacagtggag ctacccacac
      841 cactgcgatt ccagtccacg atggctatgt tcttcaacaa ggcattgtga aatcccctct
      901 ggctggagac ttcattacca tgcagtgcag agaactcttc caggaaatga acatagaact
      961 cattcctcct tacatgattg catcaaaaga ggctgttcga gaaggttctc cagccaactg
     1021 gaaaagaaaa gagaaactgc cccaggttac aaggtcttgg cacaattaca tgtgcaactg
     1081 cgtcatccag gattttcaag cttccgttct tcaggtgtca gactccacct acgacgaaca
     1141 agtggctgca cagatgccaa ccgtccacta cgaattcccc aatggctaca actgtgattt
     1201 tggggcagag cggctgaaaa ttcctgaagg gttatttgac ccttccaacg taaagggact
     1261 gtctgggaac acgatgctgg gagtcagtca cgttgtcaca accagcgtcg gaatgtgtga
     1321 catcgacatc agaccaggtc tctacggcag tgtgatcgta gcaggaggaa acacgctaat
     1381 acagagtttc actgacaggt taaatagaga gctttctcag aaaactccac caagtatgcg
     1441 gttgaaactg attgcaaaca acacgacggt ggagcggagg ttcagctcat ggattggtgg
     1501 ctctatccta gcatctttgg gtacctttca acagatgtgg atttctaaac aggaatatga
     1561 agaaggaggg aagcagtgtg tagaaagaaa atgcccttga gggctccacc ctgcctgccc
     1621 gtcacctcaa cgtctgtagc tttagtacac tcaggaaaag atgaccatct tttgtagaat
     1681 gtttatacat gtttgcatat ttcaatttcc acttaaattt tttaaggctt taactggctc
     1741 tataaattaa atgagtttgt gctttccttg aaatgcactt attcttatta caggcatttt
     1801 ataattttgt atgaatgtct attttctcta aatattttgc tttcagtaag tactctccag
     1861 ctctcctggg ggttggttgg tggaattact ctgtattgac aagtacaagt tactgcctat
     1921 gctttgtacc ttaggctaca aaactaaata aaaatcacta ctgtcctag
//
