LOCUS       NM_028765               2876 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus acyl-Coenzyme A oxidase-like (Acoxl), mRNA.
ACCESSION   NM_028765 XM_290073
VERSION     NM_028765.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2876)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK004775.1 and BE947230.1.
            
            On Apr 24, 2009 this sequence version replaced NM_028765.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK004775.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849387 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-80                AK004775.1         2-81
            81-2842             AK004775.1         83-2844
            2843-2876           BE947230.1         1-34                c
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 62.1 cM"
     gene            1..2876
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /note="acyl-Coenzyme A oxidase-like"
                     /db_xref="GeneID:74121"
                     /db_xref="MGI:MGI:1921371"
     exon            1..359
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             207..2105
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /note="acyl-CoA oxidase-like protein"
                     /codon_start=1
                     /product="acyl-coenzyme A oxidase-like protein"
                     /protein_id="NP_083041.1"
                     /db_xref="CCDS:CCDS16711.1"
                     /db_xref="GeneID:74121"
                     /db_xref="MGI:MGI:1921371"
                     /translation="MTGWSGLFIEVPLYRLASKVCCHLRGPQGFLQRACQGVCCLPRD
                     SRAAGIMEEKRKSFISQILILGEVLCMVDVSMSIKCGILFLLFGGAISNLGSPEHVTK
                     WFWPLKEQKYTGMFAMTERGHGSNVRGIQTEATFDLDNQEFVIDMPCENAHKMYIGNA
                     MHGNYAAVFAQLIIEGKSQGPHCFIVPIRDENGNLYPGVTAIDMMHKEGMNGVDNGIL
                     IFDKVRIPRENLLDKFGSVTPDGQYHSPIQSKNARFNAILATLTPSRLAVTFQALGAM
                     KLGLMIAIRYSHSRRQFGPKDKEEVKIIEHQMQALRLMSHLATALAVTFTSRHADDIL
                     DEDIFQGRALTNSRSLQALMAGLKAYSTWETVSCLQDCRECTGGMGYMMETRISDLKC
                     DTDVFVTFEGDNVVMLQVVARELLAQYSKQHKKNLLLGVIQNWTATAGDKLRTSFLAF
                     NTDTVGCLAFLLKAVNFRERVLQRSLVSRIYYKVVTKKGDFFSAWNSCMHHVTSLSLA
                     HIHRVALEQFTTAVRQCPNREDQALLMKFCLLYGTKLVFQERGWYLEHKYLTPKASML
                     IRAQLLNLCESVKDDALKVISAFNIPHITIRAPKTGIPNPGAAEAAYPAPMQPLVRDA
                     ARAQLAKL"
     exon            360..443
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            444..530
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            531..629
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            630..744
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            745..831
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            832..904
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1037
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..1072
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..1189
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..1343
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1344..1433
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1434..1543
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1544..1655
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1656..1743
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1744..1814
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1815..1916
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1917..2862
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2820..2825
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2850
                     /gene="Acoxl"
                     /gene_synonym="1200014P05Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctctttgggc ttgggccctc tggcttctgt ttgtcctgga accctggctt ttcctagcag
       61 gctgtgacag gctaccctgg atcttggtct gtgtgctgct tttggcagga gtctttgtcc
      121 cagctccagc cccatgcact tggatgctgg ccacttggcc aggccagccc tggccccatg
      181 ggatcctgtg gaagagttga gcagagatga caggatggag tggactgttt atagaagtcc
      241 ctctgtatag attggcatcc aaagtgtgct gtcatctgcg gggaccacag ggatttcttc
      301 agagagcctg ccagggagtg tgttgtctgc caagggactc cagagcagct ggaatcatgg
      361 aagaaaaaag gaagagcttc atcagccaaa tccttatcct gggagaagtg ctctgcatgg
      421 tggatgtgtc catgtctata aagtgtggaa tccttttttt gttatttggt ggtgcaatca
      481 gcaatcttgg aagtcctgaa catgttacca agtggttttg gccactcaag gagcagaagt
      541 atactgggat gtttgcaatg actgagaggg gccatgggag caacgtgaga gggatccaga
      601 ctgaggccac ctttgacctc gacaatcagg agtttgtgat tgacatgccg tgtgagaacg
      661 cccacaagat gtacatcggc aatgccatgc atgggaacta cgctgctgtc ttcgcccaac
      721 tcatcattga gggaaagtct caagggcccc actgttttat tgtccctatc agggatgaaa
      781 atggaaactt gtacccagga gtgacagcta ttgacatgat gcacaaagag ggtatgaatg
      841 gtgtggataa cggaattttg atatttgaca aggttcggat tcccagagag aacctgctgg
      901 ataagtttgg ttctgtgact ccagatggac aataccattc acctattcaa agcaagaacg
      961 caagattcaa tgcgatcctg gcaacactga ctccttcaag actagcagtg actttccaag
     1021 ctttgggcgc catgaagctt ggactgatga tagccatccg ctacagccac agccgaaggc
     1081 aatttgggcc caaggacaag gaagaagtga agatcattga gcaccaaatg caggcactca
     1141 ggctgatgtc tcacctggcc acagccctgg ccgtgacctt cacaagcagg catgcagacg
     1201 acatcctgga tgaagacatc ttccagggaa gggcgctcac caacagtcgc tcgctacagg
     1261 cactgatggc tggactgaaa gcctacagta catgggagac tgttagctgc ctacaggact
     1321 gtcgtgaatg caccggaggc atgggttaca tgatggaaac cagaatctca gacctgaaat
     1381 gtgacacaga tgtgtttgta acctttgaag gtgacaatgt ggtcatgctt caggttgtgg
     1441 cccgggaact gctggcccag tacagcaagc agcataagaa aaacctgctc ttgggtgtga
     1501 tccagaactg gacagcaact gccggggaca agctgagaac cagtttcctg gcgtttaaca
     1561 ctgacacggt aggatgtctt gcctttctgc tgaaagcagt gaattttcga gaaagggttc
     1621 ttcagcggag tttggtgtcc agaatttact ataaggtggt gaccaagaag ggggacttct
     1681 tcagtgcctg gaactcctgt atgcaccatg tcacctcatt gtctctggca cacattcaca
     1741 gagttgcact agagcagttc acgacggcag tgaggcaatg tcccaacagg gaggaccagg
     1801 ctttgctaat gaagttttgt ctgctgtatg gaacgaagct ggtgttccag gagcgaggct
     1861 ggtacttaga acataaatac ctgaccccca aggccagcat gctgatcagg gctcagttgc
     1921 tgaatttgtg cgagtccgtg aaggatgacg ccctgaaggt gatctctgcc ttcaacattc
     1981 cacacatcac catccgtgca ccaaaaacag gaatccccaa ccccggggct gccgaggccg
     2041 cctacccggc acccatgcaa ccgctcgtgc gggatgcggc gcgcgctcaa ctggccaagc
     2101 tgtgagccag gcgagaaatt tagtgtccca tcttccaagt atttggccag agctggagca
     2161 gaggccaaag tggcaggtgc agggcagcca ccttggggat tttggtctgg cagaggaggt
     2221 ccagctaagg ctggcgagga gcagggcaag ttgtccggga gagggagcca tagatggata
     2281 ccccactatc acagtgactt agcctggttt gtagcctcgc ctggccttta ccttgacttc
     2341 tcccagccat ggccctggat cccccagaca atcgtcttcg cccaccgcat ggtgccacca
     2401 aagatctcta ctgtcagtgg tgactcatat tcccagagac ttcgaaaagc tctggcgctg
     2461 ggttaaaaaa aaaaaaatca aaacataaaa atcaaacacc cttaggcaaa aggggtggag
     2521 gaaagctcca ccctctccaa gctcgggcaa aagttcagcg agggatgatt cgtgaatcag
     2581 gcttgctcca gctttgcgag gaaatgcact ggcgagagcg gagagcttga gcctgcagtc
     2641 gccctagtct caccaggtag gtgatctccg gaccgcacga ccatgcgcga caaacgctcc
     2701 tccgcgctaa actgttacca acccttcaga aaagcataga tgtgcaaaga ttaataaata
     2761 atagaaagat gctcccgcgg cttggagagg tagggctggc tggcctgggg aataattgga
     2821 ataaagtgat tttggaattt ggagagatta cacaggcgga aaaaaaaaaa aaaaaa
//
