LOCUS       NM_001356289            1630 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus acyl-coenzyme A amino acid N-acyltransferase 2
            (Acnat2), transcript variant 2, mRNA.
ACCESSION   NM_001356289 XM_006537726
VERSION     NM_001356289.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Hunt,M.C. and Alexson,S.E.
  TITLE     Novel functions of acyl-CoA thioesterases and acyltransferases as
            auxiliary enzymes in peroxisomal lipid metabolism
  JOURNAL   Prog Lipid Res 47 (6), 405-421 (2008)
   PUBMED   18538142
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX537352.18, AK050357.1 and AK050308.1.
            
            On Sep 28, 2017 this sequence version replaced XM_006537726.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: EU564338.1, ERR2680379.282660.1
                                    [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-68                BX537352.18        76178-76245         c
            69-1546             AK050357.1         100-1577
            1547-1625           AK050308.1         1581-1659
            1626-1630           BX537352.18        50327-50331         c
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 26.37 cM"
     gene            1..1630
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /note="acyl-coenzyme A amino acid N-acyltransferase 2"
                     /db_xref="GeneID:209186"
                     /db_xref="MGI:MGI:2444345"
     exon            1..68
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            69..559
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1356
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /note="acyl-CoA:amino acid N-acyltransferase 2"
                     /codon_start=1
                     /product="acyl-coenzyme A amino acid N-acyltransferase 2"
                     /protein_id="NP_001343218.1"
                     /db_xref="CCDS:CCDS18171.1"
                     /db_xref="GeneID:209186"
                     /db_xref="MGI:MGI:2444345"
                     /translation="MMIQLIATPSNALVDEPVSIRATGLPPSQIVTIKATVKDENDNV
                     FQSQAFYKTNEAGEVDLEKTPALGGDYVGVHPMGLFFSLKPKKAFHRLMKKDVMNSPL
                     CICLDLYDSVNWLETVRIPSKASQRVQRWFVGPGVKREQIQEGRVRGALFLPPGKGPF
                     PGIIDLFGLIGGLVEFRASLLASHGFAVLALAYFAYEDLPEKPQEVDLEYFEEAANFL
                     LSHPKIQQPGIGVISTSKGAEIGLAMACYLKQVIATVCINGPTTITIFPLRYQDLVMT
                     PIHPALERIQVHDSGALLFRYTTQYLHNKLNSQNILPVEKAQGKILFIVGENDECLDS
                     KLHAQKAMDRLQRHGRSSGRMLAYPGAGHLIEPPYSPVCFVAWFPVLGQPMCFGGDLM
                     AHAAAQEHSWREIQKFFRKHLLQSGSKL"
     exon            560..762
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            763..1630
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1535..1540
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /note="hexamer: AATGAA"
     polyA_site      1560
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
                     /note="major polyA site"
     polyA_site      1630
                     /gene="Acnat2"
                     /gene_synonym="C730036D15Rik"
ORIGIN      
        1 gaaggagaga aagcagattc ctggctcctg gtcatagaaa gctgtcctcc tgagattctg
       61 aatggcaggg aggaagcgcc cctcaacacc ttgatgatga tccagttgat agccacacct
      121 tcaaatgccc ttgtggatga gcctgtgtcc attcgagcaa caggcctgcc tccatcgcag
      181 atagtgacca tcaaggcaac agtgaaagat gaaaatgaca atgtgttcca atcccaagcc
      241 ttctacaaga ctaacgaggc tggtgaggtg gacctggaga agacaccggc tttggggggt
      301 gactatgtag gggtccaccc aatgggcctc tttttctctc tgaaacccaa gaaggctttc
      361 cataggctga tgaagaaaga tgtgatgaac agcccccttt gcatctgttt ggacctgtac
      421 gactctgtta actggctaga aacagtcagg attccatcca aggccagcca gagagtgcag
      481 cgctggtttg ttggccctgg ggttaagcgg gaacagattc aagaaggtcg ggttcgggga
      541 gccctttttc tccctccagg gaaaggtcct ttcccaggaa ttattgattt gtttggtctc
      601 attgggggtc tagttgaatt tcgtgcaagt cttttggcat cccacggctt tgctgtgctg
      661 gcattggcat attttgccta tgaagacctg cctgagaaac cacaagaggt ggacttggag
      721 tattttgaag aagctgctaa cttcctacta tctcacccca agatccaaca gccaggaatt
      781 ggtgtgatct ccacgagcaa aggagcagag attgggctag ctatggcctg ttacctgaag
      841 caggtgattg ccacagtctg cataaatggg cccaccacca tcacaatctt cccactaaga
      901 taccaggatc tggtgatgac accaatccat ccggctctgg aacggatcca agtccatgat
      961 tcaggggctt tactcttccg ttacactaca caatatctcc ataataagct gaactcacag
     1021 aatatacttc ccgtggaaaa ggcccagggg aaaatcctct tcattgtggg agagaatgat
     1081 gaatgtttgg atagcaagtt gcatgcacag aaggccatgg accggctcca gaggcatgga
     1141 agaagcagtg gaaggatgct ggcataccct ggggcaggcc acctcataga gccaccttat
     1201 tctcccgttt gctttgtggc ctggttccct gtcctgggtc aacccatgtg ttttggagga
     1261 gatctcatgg ctcacgcagc agcccaggaa cactcctgga gagagatcca aaagttcttc
     1321 aggaaacacc tccttcaatc cggaagcaaa ctctaaatag tgtgtaaagt gccagagtaa
     1381 agtgcaggga gtgctttaga aaaaatgttg gaattagtgt ggggataaaa gcatcagata
     1441 gagattgctg ggaaagggta gcgatggggg tcagaattct cctggctttc ttacactcac
     1501 attcacccca attcaattgg aaggatatga gataaatgaa aagaccaaga tacacctgca
     1561 tctgaagtgt tcctgacaaa tctgtatgta gtttgcaatt ttcttatctg ttttttaaag
     1621 atcagaagaa
//
