LOCUS       NM_178799               2375 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus acyl-Coenzyme A dehydrogenase family, member 12
            (Acad12), mRNA.
ACCESSION   NM_178799 XM_488540 XM_916155
VERSION     NM_178799.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   3  (bases 1 to 2375)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2375)
  AUTHORS   Pagliarini,D.J., Calvo,S.E., Chang,B., Sheth,S.A., Vafai,S.B.,
            Ong,S.E., Walford,G.A., Sugiana,C., Boneh,A., Chen,W.K., Hill,D.E.,
            Vidal,M., Evans,J.G., Thorburn,D.R., Carr,S.A. and Mootha,V.K.
  TITLE     A mitochondrial protein compendium elucidates complex I disease
            biology
  JOURNAL   Cell 134 (1), 112-123 (2008)
   PUBMED   18614015
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB643798.1, AK033963.1, AK080793.1 and BB352084.1.
            
            On or before Sep 10, 2009 this sequence version replaced
            XM_916155.2, XM_488540.4, NM_178799.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK033963.1, SRR1660817.109230.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385, SAMN00849389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               BB643798.1         1-149
            150-177             AK033963.1         69-96
            178-202             AK080793.1         178-202
            203-2367            AK033963.1         122-2286
            2368-2375           BB352084.1         265-272
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 61.87 cM"
     gene            1..2375
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /note="acyl-Coenzyme A dehydrogenase family, member 12"
                     /db_xref="GeneID:338350"
                     /db_xref="MGI:MGI:2443320"
     exon            1..168
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            169..368
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..1849
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /codon_start=1
                     /product="acyl-Coenzyme A dehydrogenase family, member
                     10-like"
                     /protein_id="NP_848914.2"
                     /db_xref="CCDS:CCDS51642.1"
                     /db_xref="GeneID:338350"
                     /db_xref="MGI:MGI:2443320"
                     /translation="MWVRRLFQPSTLHWAWRTTALNHPLGRHQGGLRWTHSGGRSYRA
                     VIFDTGGVLVPSPGTVAVGQASSATAQQSGKLTESMAELAWDFATKEGFRVFKEMPAT
                     KTLSRSYHAWAGPRSPRTPKGVRGHSTVAAASPSHEAKGGLVISPEGLSPAVRKLYEQ
                     LVQFIEQKVYPLEPELQRHQASANRWSPSPLIEDLKEKAKAEGLWNLFLPLETDPEKK
                     YGAGLTNVEYAHLCEVMGMSLYASEIFNCSVPDMGTMEILVRYGTEEQKARWLVPLLE
                     GRIHSCFAMTDRKVASSDASNIEASIKEEDNSYVINGHKWWTSGILHPHCKLCVFMGK
                     TDPQAPRHQQQSMLLVPMDSPGITVIRPLSVFGLEDPPGGFAEVQFKDVRVPKENIIL
                     GPGRAFEIAQGRLGRARIHNSMRLIGYSERALALMKTRVMSRTAFGKPLVEQGTILAD
                     IARSRVEIEQARLLVLKAAHLMDVAGNKAAALEMAMIKMVVPSMANQVIDRAIQAFGA
                     AGLSSDYPLAQFFGWAQTLRLGDDQLKVAKMELKNQSRLQEPAARRV"
     exon            369..769
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            770..910
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            911..1048
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1049..1139
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1140..1298
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1471
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1472..1615
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1616..1693
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1694..2375
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2268
                     /gene="Acad12"
                     /gene_synonym="9330129D05Rik"
                     /note="major polyA site"
ORIGIN      
        1 ttggctgacc gtctggacag tgtccgagga gcgtgcgcag tgcgcgctga gtcttctggt
       61 ttgttttgca tctgactcct ccatttgtcc tccctagttt tcccgcaggg ttcaccgtga
      121 atcagagggt tcctgggtct tcgacctcag ggttgtaact ttctgcagcc tccatctcac
      181 catgtgggta agaagacttt tccagccttc cactctgcac tgggcatgga ggaccacggc
      241 cctgaaccat cccctgggca ggcatcaggg aggcctccgc tggacacatt ctggaggccg
      301 aagctacaga gcagtcattt ttgacacggg cggagttctc gtgccttctc cagggacagt
      361 ggctgtgggc caggcaagct cagcaacagc ccaacaaagt ggaaagctca ctgagtccat
      421 ggctgagctg gcctgggatt ttgccaccaa agaagggttc cgggttttca aagagatgcc
      481 agccaccaaa acactgagca gatcctacca tgcctgggcg gggccgaggt ccccgaggac
      541 tcccaagggt gtgaggggtc acagcactgt agcagctgct tccccttctc atgaggcaaa
      601 gggaggcctg gtcatctctc cagagggcct gtctcctgcg gtcagaaagt tgtatgagca
      661 gctggtgcag tttatagaac agaaggtgta ccccctggag ccagagctgc agagacacca
      721 ggcctcggcc aacaggtgga gcccttcccc gctgatagaa gacctcaagg agaaagccaa
      781 ggctgaggga ctttggaacc ttttcctacc cttggagact gatcctgaga aaaagtacgg
      841 agcagggctg actaacgtgg aatatgcaca tctgtgtgaa gtgatgggca tgtctctgta
      901 tgcttctgag atatttaatt gctctgtccc tgatatgggg actatggaga tcctggtgcg
      961 gtatggcact gaggagcaga aggcccgctg gctggtgcca ctgttggagg gcaggatcca
     1021 ttcgtgcttc gccatgactg atcgaaaggt ggcctcctca gatgcctcta acatcgaggc
     1081 ttccatcaaa gaggaagata actcctatgt cataaatggt cacaagtggt ggacctcagg
     1141 catcctgcat cctcactgca aactctgtgt gtttatggga aaaacagacc cacaggcccc
     1201 aaggcaccag caacaatcta tgctcttggt tcccatggac tcgccaggaa tcacagtcat
     1261 ccggcctctg tcagtgtttg gtttggagga tcctccaggt ggctttgctg aagtacagtt
     1321 caaggacgtg cgtgtgccta aggaaaacat aattctgggc cctggcagag cctttgagat
     1381 cgctcagggc aggctggggc gtgcccggat tcataactcc atgaggttga ttgggtattc
     1441 agagagggcc ctggcactca tgaagacacg ggtgatgtcc cgcacggcct tcgggaagcc
     1501 ccttgtggag cagggcacca tcctggcaga cattgcccgg tcacgtgtgg agatcgagca
     1561 ggcccggctg ctggtgctga aagctgctca cctcatggat gtggctggaa ataaggctgc
     1621 agctttagag atggccatga ttaaaatggt cgtcccttcc atggccaatc aagtaattga
     1681 ccgcgctatt caggcctttg gagcagcggg cctcagcagt gactaccccc tggctcagtt
     1741 ctttggctgg gcccaaaccc tgcgcttagg tgatgaccag ctgaaggtgg ctaagatgga
     1801 actgaagaat cagtccaggc tgcaggagcc agcagcacgc agagtgtaga tgctgagttt
     1861 ggcatggcct gcaatgtgtg gtcctcacat cctatccagc agctcagtct gcgacagtca
     1921 ctgtgacctg agcctcctgg ggtctcttca agaagatgtt tctggagaga ctgagctcaa
     1981 gctttaggcg tggaggaagg ggatttgggt gcctgggtag ctgttcttga gttcttcaga
     2041 tttgacctgt gacccccgcc ccttcctctg ggctgtagga atctgggcac cttggactct
     2101 gatgtctcca gaggccatta ggctcctcct ttgtgcttct aggaaagcag ggggcgtggt
     2161 gcacagcaaa tgcccctggg atgaagccac tgtgtgacca ctgatgtgcc cacgtcacag
     2221 aatactgatt cagatgctct gtggtaaaag ggcctttcgg gacacaaaga atctgtctac
     2281 ttcctatgtc acatgaggga catgggtgat aaagataccc actgccccac ctatgtcaca
     2341 tggaggacat gggtgataaa gtttcccact gctcc
//
