LOCUS       XM_030254801            2710 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus BRCA1 A complex subunit (Abraxas1),
            transcript variant X3, mRNA.
ACCESSION   XM_030254801
VERSION     XM_030254801.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030254801.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..2710
                     /gene="Abraxas1"
                     /gene_synonym="3830405G04Rik; 5630400M01Rik; Ccdc98;
                     Fam175a"
                     /note="BRCA1 A complex subunit; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     ESTs, 161 long SRA reads, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     14 samples with support for all annotated introns"
                     /db_xref="GeneID:70681"
                     /db_xref="MGI:MGI:1917931"
     CDS             564..1520
                     /gene="Abraxas1"
                     /gene_synonym="3830405G04Rik; 5630400M01Rik; Ccdc98;
                     Fam175a"
                     /codon_start=1
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X2"
                     /protein_id="XP_030110661.1"
                     /db_xref="GeneID:70681"
                     /db_xref="MGI:MGI:1917931"
                     /translation="MLRDSGCGGSDRGGSMEGESTLGVLSGFVLGALTFHHLNTDSDT
                     EGFLLGEMKGEAKNSITDSQMDNVKVVYTIDIQKYIPCYRLFSFYNSLGEVNEHALKK
                     VLSNVRKTVVGWYKFRRHSDQIMTFREQLLHRNLQTHLSSPELVFLLLTPSITTESCS
                     THCLEHALYKPQRGLFHRVPLVVTNLGMSDQLGYKTEPASCTSTVFSRAVRTHSSQFF
                     NEDGSLKEVHKINEMYAAVQEELKSICQKVEQSEREVEKLLMDVNQLKEVRRTQQARA
                     TGAGKQQERRMSRETHRRTSFFVKLCEHFFQSLKFFILALFL"
ORIGIN      
        1 accgactgca gaaaacgctg cgcaaatact aaccttcacc taactggcta agagtttctc
       61 aggggtccac gtcccacgcc gctgtgatga acggccttac tagaacgaag aagggaaaat
      121 cctgcacgcg tattccactg caggacaacc agttttaaca ataagcgtga gaaaagatat
      181 tgagagcagc agtttgcaaa gcgactgact aggatccaaa ccatcaccga gtcggccctc
      241 aattcttaga aggaccaaac tcttactgtt gacagtcggg agtcagtttg ggagctggaa
      301 aaagtgagag agctagcaaa atgaactgaa agtatttaca gcaaatattg cagagaaagc
      361 tgccctcacc tccagaaggg gtggaggaag aaggaagccg gccttaaaga ctgtacaagt
      421 ttgttctctg agcctcctgc caggtgtctc agccaagctg atgaaagaag caccctaccc
      481 ggctagagga caccgcgctc cctacaaccc gcgtctcccg gtgcgcaggc tcaagccccg
      541 cccctacgct ccagcctccc gtcatgctcc gcgatagtgg ctgtggcggc agcgaccgag
      601 gcggcagtat ggagggcgag agcacgttgg gggtgctgtc tggcttcgtg ctcggcgcgc
      661 tcactttcca tcatctcaac acagactcag acacggaagg ttttctcctc ggtgaaatga
      721 aaggtgaagc caagaatagc attactgatt cacagatgga caacgttaaa gttgtttata
      781 caattgacat tcagaaatat atcccatgct accggctttt tagcttttat aattctttag
      841 gtgaagtaaa cgaacatgca ctgaagaagg ttctttcaaa tgtcagaaag actgtggtgg
      901 gttggtataa attccgtcgt cactcggatc agatcatgac atttagagag cagttactcc
      961 acagaaactt acagacacat ctttcaagcc ctgagctggt tttcctgttg ttaacaccga
     1021 gtataacaac agaaagctgc tccactcact gcctggaaca cgccttatat aaacctcaaa
     1081 gggggctttt tcatagggta ccattggtgg ttaccaatct gggaatgtct gatcaactgg
     1141 gttataaaac agaacctgct tcctgtacgt ccactgtctt tagtagagct gtgaggacac
     1201 acagttctca gttctttaat gaagatggat cattaaagga agtccataag ataaatgaaa
     1261 tgtatgctgc tgtacaagaa gagttaaaga gtatatgcca aaaagttgaa caaagtgaac
     1321 gagaagtaga gaaactattg atggatgtaa accaattaaa agaagttaga agaacccagc
     1381 aagcacgggc tacaggagca ggtaagcagc aggagagaag aatgtccaga gaaacccaca
     1441 ggagaacatc cttctttgtc aagctttgcg aacatttttt ccagagtctg aagttcttca
     1501 ttcttgcgtt atttctttga aaaatagaca catttctccc agtgggtgta acgttaacca
     1561 ccatgttgat gtagtggatc agctgacctt aatggtagag tatgtgtaca gccctgaagc
     1621 tagtccagtg cccacagccc agctacgtaa acggaaggct ctagacacac acgaccaggg
     1681 gtctgtgaag agaccacggc tgctggagac agaaagcaga ccttctgtgg cagcgtcccg
     1741 cagcaggcac caagacaagg cttcctcaag cagcctagat atagacatag agatggggag
     1801 cccagaagat gatgctgact atcctcgctc tcccacattt taattttttt tagacgacat
     1861 ttcttactag actgaggttt cgggcacttg ttttattttt actctttgcc ttctggatta
     1921 atacacagaa aagtttgttt ttactctatt cacctgtttg taatacatgg atatttttac
     1981 tgttcaactg cttataatat ataggtaagt taatatttta tacagtatct taattcttac
     2041 ttatatctca cattgtaaat gctttgtaaa tgtgtacata tgtagatgca tagctataaa
     2101 tacatatata agcttgtggt ttgggaactg tgaatggtag gcaacttctc taccactgag
     2161 ctccagtcca aaggtgtttg gttttggttt tgtttgtttg tttgtttgtt tgtttgtttg
     2221 tttgtttgtt tgtttgtttt gtgggttgag gggtgcattg ggatagggtc tctctgtgta
     2281 gctctgggtg ttctaaatct cacaaatatc cacctccctc tgcctcctgt gctgagatta
     2341 aaggtgtgtg ccaataagat gattttattt caaagccaca aacctttccg ctcctcccac
     2401 ccccaaattg tcgagggaaa gacttaaata gatacattct tttcaactag aatattcttc
     2461 aagttgggaa aagagaaact agcctttttt cacaacctgg aaagaagcac agatgttcgt
     2521 aagcccaggc gggcctcaga cttggttcag ctggcacggg tatctcctat caagactgat
     2581 gacctgagtt ggatttttga aactcccaca gtgaaggaaa gaaccaactc tcacaacctt
     2641 tcctgacttc atatattgac catggcatat acatgaaacc cccataaata aatgtagtga
     2701 aaaatgtaaa
//
