LOCUS       NM_013853               2573 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Mus musculus ATP-binding cassette, sub-family F member 2 (Abcf2),
            transcript variant 1, mRNA.
ACCESSION   NM_013853 NM_173845
VERSION     NM_013853.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Mattebo,A., Sen,T., Jassinskaja,M., Pimkova,K., Prieto
            Gonzalez-Albo,I., Alattar,A.G., Ramakrishnan,R., Lang,S., Jaras,M.,
            Hansson,J., Soneji,S., Singbrant,S., van den Akker,E. and
            Flygare,J.
  TITLE     Yippee like 4 (Ypel4) is essential for normal mouse red blood cell
            membrane integrity
  JOURNAL   Sci Rep 11 (1), 15898 (2021)
   PUBMED   34354145
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Pan,J., Mor,G., Ju,W., Zhong,J., Luo,X., Aldo,P.B., Zhong,M.,
            Yu,Y., Jenkins,E.C., Brown,W.T. and Zhong,N.
  TITLE     Viral Infection-Induced Differential Expression of LncRNAs
            Associated with Collagen in Mouse Placentas and Amniotic Sacs
  JOURNAL   Am J Reprod Immunol 74 (3), 237-257 (2015)
   PUBMED   26073538
REFERENCE   3  (bases 1 to 2573)
  AUTHORS   Krahling,A.M., Alvarez,L., Debowski,K., Van,Q., Gunkel,M.,
            Irsen,S., Al-Amoudi,A., Strunker,T., Kremmer,E., Krause,E.,
            Voigt,I., Wortge,S., Waisman,A., Weyand,I., Seifert,R., Kaupp,U.B.
            and Wachten,D.
  TITLE     CRIS-a novel cAMP-binding protein controlling spermiogenesis and
            the development of flagellar bending
  JOURNAL   PLoS Genet 9 (12), e1003960 (2013)
   PUBMED   24339785
REFERENCE   4  (bases 1 to 2573)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   5  (bases 1 to 2573)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   6  (bases 1 to 2573)
  AUTHORS   Carninci,P., Waki,K., Shiraki,T., Konno,H., Shibata,K., Itoh,M.,
            Aizawa,K., Arakawa,T., Ishii,Y., Sasaki,D., Bono,H., Kondo,S.,
            Sugahara,Y., Saito,R., Osato,N., Fukuda,S., Sato,K., Watahiki,A.,
            Hirozane-Kishikawa,T., Nakamura,M., Shibata,Y., Yasunishi,A.,
            Kikuchi,N., Yoshiki,A., Kusakabe,M., Gustincich,S., Beisel,K.,
            Pavan,W., Aidinis,V., Nakagawara,A., Held,W.A., Iwata,H., Kono,T.,
            Nakauchi,H., Lyons,P., Wells,C., Hume,D.A., Fagiolini,M.,
            Hensch,T.K., Brinkmeier,M., Camper,S., Hirota,J., Mombaerts,P.,
            Muramatsu,M., Okazaki,Y., Kawai,J. and Hayashizaki,Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
REFERENCE   7  (bases 1 to 2573)
  AUTHORS   Schriml,L.M. and Dean,M.
  TITLE     Identification of 18 mouse ABC genes and characterization of the
            ABC superfamily in Mus musculus
  JOURNAL   Genomics 64 (1), 24-31 (2000)
   PUBMED   10708515
REFERENCE   8  (bases 1 to 2573)
  AUTHORS   Sam,M., Wurst,W., Forrester,L., Vauti,F., Heng,H. and Bernstein,A.
  TITLE     A novel family of repeat sequences in the mouse genome responsive
            to retinoic acid
  JOURNAL   Mamm Genome 7 (10), 741-748 (1996)
   PUBMED   8854861
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY731788.1, AK151545.1 and AK147937.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by NM_013853.3.
            
            On Jun 24, 2010 this sequence version replaced NM_013853.1.
            
            Transcript Variant: This variant (1) differs in the 5' UTR compared
            to variant 3. Variants 1 and 3 both encode the same isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK147937.1, AK151545.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-45                BY731788.1         1-45
            46-2569             AK151545.1         2-2525
            2570-2573           AK147937.1         2525-2528
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 11.93 cM"
     gene            1..2573
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /note="ATP-binding cassette, sub-family F member 2"
                     /db_xref="GeneID:27407"
                     /db_xref="MGI:MGI:1351657"
     exon            1..121
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            122..330
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..2048
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /note="isoform 1 is encoded by transcript variant 1;
                     developmentally regulated repeat element-containing
                     transcript 3; ATP-binding cassette, sub-family F (GCN20),
                     member 2"
                     /codon_start=1
                     /product="ATP-binding cassette sub-family F member 2
                     isoform 1"
                     /protein_id="NP_038881.1"
                     /db_xref="CCDS:CCDS19125.1"
                     /db_xref="GeneID:27407"
                     /db_xref="MGI:MGI:1351657"
                     /translation="MPSDLAKKKAAKKKEAAKARQRPRKGHEENGDAVTEPQVAEEKI
                     EEANGRETTGDGEVDLLTKELEDFEMKKAAARAVTGVLASHPNSTDVHIINLSLTFHG
                     QELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSE
                     KTPLQCVMEVDTERAMLEREAERLAHEDAECEKLMELYERLEELDADKAEMRASRILH
                     GLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEEL
                     KTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYVKTRLELEENQMKRFH
                     WEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMMASGLTERVVSDKTLSFYFPP
                     CGKIPPPVIMVQNVSFKYTKDGPCIYNNLEFGIDLDTRVALVGPNGAGKSTLLKLLTG
                     ELLPTDGMIRKHSHVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIGRY
                     GLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINE
                     FEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAYKEHLKSKLVDEEPQLTKR
                     THNV"
     exon            331..543
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            544..898
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            899..994
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1097
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1098..1193
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1194..1313
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1314..1403
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1404..1514
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1515..1577
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1578..1706
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1707..1910
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
     exon            1911..2573
                     /gene="Abcf2"
                     /gene_synonym="0710005O05Rik; Drr3; E430001O06"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagccctc gcggcagcgc gccaagggcc gcccggggcc gtgattggtt ggggagccgg
       61 ccgcacgcgg aggagctcaa ggagcagctc tgttgcgaca gaggccgagc ggcgaggccc
      121 cactcctgaa aggactgtaa ctacccctgt ggctcatcac catgccttcc gacctggcca
      181 agaagaaggc agccaaaaag aaggaggctg ccaaagcccg acagcgaccc agaaagggac
      241 atgaagaaaa tggagatgct gtcacagaac ctcaggtggc agaagagaaa atcgaggagg
      301 ccaatggcag agagaccaca ggagatggag aagtagattt gctgaccaag gagctggagg
      361 actttgagat gaagaaagct gctgctcgag ctgtcaccgg tgtcctggct tctcacccca
      421 acagtactga tgtccacatt atcaacctct cccttacctt tcatggtcaa gagctgctca
      481 gcgacaccaa actggaatta aactcaggcc ggcgctatgg cctcattggc ttaaatggaa
      541 ttggaaagtc catgctgctc tcggctattg ggaaacgtga agtgcccatc ccagagcaca
      601 tcgacatcta ccatctgact cgtgagatgc ctcctagcga aaaaacaccc ttgcagtgtg
      661 tgatggaggt ggacacagag cgggccatgc tggagagaga ggctgagcgg ttagcacatg
      721 aggatgcgga gtgtgaaaag ctcatggagc tctatgaacg gctggaagag ctggatgctg
      781 acaaagctga gatgagggcc tcaaggatct tacatggatt gggcttcaca cctgctatgc
      841 agcgcaagaa gctgaaagac ttcagtggtg gctggcggat gagagttgct cttgctagag
      901 ccctctttat tcggcccttc atgctgcttc tggacgagcc taccaaccac ctggacctcg
      961 atgcttgtgt gtggctggaa gaggaactta agactttcaa gcgcatcctg gtcctggtgt
     1021 cccattccca ggacttcctg aatggggtct gtaccaatat catccatatg cacaacaaga
     1081 aactcaagta ttacacgggt aattatgatc agtatgtgaa gacacggctg gagttggaag
     1141 agaaccagat gaagaggttt cactgggagc aggaccagat cgcacacatg aagaactaca
     1201 ttgccaggtt tggccatggc agtgccaagc tggcccggca ggcccaaagc aaagagaaaa
     1261 cactacagaa aatgatggca tccggactga cagaaagggt tgtgagtgac aagacgctgt
     1321 cattttattt cccaccgtgc ggtaagatcc caccacctgt cattatggtg cagaacgtga
     1381 gcttcaaata tacgaaagac gggccttgca tctacaataa tctagaattt ggtattgatc
     1441 ttgacacacg agtggctctg gtaggaccca atggagcagg gaagtccact ctgctgaagc
     1501 tgctaaccgg agagcttctg cctacagatg gaatgatccg gaagcattct catgtcaaga
     1561 tagggcgtta ccatcagcac ttacaggagc agctggacct tgacctttca ccattggaat
     1621 acatgatgaa gtgctatcca gagatcaagg agaaggagga gatgaggaag atcattggga
     1681 gatacggcct cactgggaaa cagcaggtga gcccaatccg gaacctgtcg gatgggcaga
     1741 agtgccgagt gtgcctggcc tggctggcct ggcagaaccc tcacatgctc tttctggacg
     1801 agcctaccaa tcacctggac atcgagacca ttgatgctct ggcagatgcc atcaatgagt
     1861 ttgagggtgg aatgatgcta gtcagccatg acttcagact catccagcag gttgcacagg
     1921 agatttgggt ctgtgagaaa cagacaatca ccaagtggcc tggagacatc ctggcctaca
     1981 aggagcacct caagtccaag ctggtagatg aggagcccca gctcaccaag aggacccaca
     2041 atgtgtgagc cctcagccag gcttgggtca ggaatgccac ctggagactg ccagctgaca
     2101 cctgaccagc cactcaggac aggaccctgg ggctgcactc ctgcactgct gcaatactgc
     2161 cctcagcctc tcccctcagc ctgccttcgc tgcatcatat ctccagctgg acagcacctg
     2221 tccgttttcc caccctcctt ccatttgggt ctgtctgtct ggactcggct ggctgttctc
     2281 tccagaccct tgctggttac cttgccctga aagatgcagc caggggtacc tgggttaacc
     2341 caagggccca agccctggtc tggccctgga aggattcaag agcctcattt tatgggtttc
     2401 ggtgatgttg gagaaatact gccagcccat caaccccgtt ccttattgct tctggtttgg
     2461 agctctgggc cagggcctag tcctggtcag tattttaata attatttaac agtgtagatc
     2521 tatgtgtcat ctaccaagtg tccaataaaa gaggaagcta cagaccccct cct
//
