LOCUS       NM_177213               5335 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus ATP-binding cassette, sub-family A member 15 (Abca15),
            mRNA.
ACCESSION   NM_177213
VERSION     NM_177213.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5335)
  AUTHORS   Nagamachi A, Matsui H, Asou H, Ozaki Y, Aki D, Kanai A, Takubo K,
            Suda T, Nakamura T, Wolff L, Honda H and Inaba T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
REFERENCE   2  (bases 1 to 5335)
  AUTHORS   Chen ZQ, Annilo T, Shulenin S and Dean M.
  TITLE     Three ATP-binding cassette transporter genes, Abca14, Abca15, and
            Abca16, form a cluster on mouse Chromosome 7F3
  JOURNAL   Mamm Genome 15 (5), 335-343 (2004)
   PUBMED   15170222
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY243471.1.
            
            On Apr 11, 2004 this sequence version replaced NM_177213.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY243471.1, BC141350.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5335
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="BALB/c"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 64.72 cM"
     gene            1..5335
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /note="ATP-binding cassette, sub-family A member 15"
                     /db_xref="GeneID:320631"
                     /db_xref="MGI:MGI:2388709"
     exon            1..141
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            142..222
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             163..5169
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /note="ATP-binding cassette transporter sub-family A
                     member 15; ATP-binding cassette, sub-family A (ABC1),
                     member 15"
                     /codon_start=1
                     /product="ATP-binding cassette, sub-family A member 15"
                     /protein_id="NP_796187.2"
                     /db_xref="CCDS:CCDS40109.1"
                     /db_xref="GeneID:320631"
                     /db_xref="MGI:MGI:2388709"
                     /translation="MASWESRKLLLLLWKNFTLKRRKFGTLVSEIVLVLLLSIVLLTT
                     RHLLSIKKIEALYFPDQPISTVPSFFRASVTSFYPWELAYVPSNIMVVENIVKNVKND
                     LNLHMKVIGFPSESDFEDYARSTVNSRNILAAIVFGHNFANSSDPLPKKVKYYLRFSD
                     IKKNINSGAYYQGDTWLTKFLFHSLRLVGPRNPYEADGGSPGYITEGFLAVQHALDKA
                     IMLHHGGADAAALFNDISLFIQRFPYPAYYHDYFYLFATTFIPLTVACTFFFNHYVLV
                     WSIVWEKENRLKEYQLMIGLRNWMFWVAYFFTFLCLYFINIIVMCMVLFVKIEPAPIF
                     QYNDPTLVFIFLLFYAISSIFFSFMVSTLFNKVSLAMSLGSFLFFLTYFPAVAMHQSF
                     ERMPSKQKLIWSFDFNVGMAFGFRFLVNTDAKKTGMKWSNIFLSTDSDSFLFAYVLGM
                     LLADAFIYGLVAWYIEAVFPGEYGVPKPWNFFLMHSYWFGEPPQQKLEITQFYERVES
                     KYFEAEPTDLTAGIQIKHLHKVFQKNNTTKVAIKDLSLNLYEGQVTVLLGHNGAGKST
                     TLSILSGLYPPTSGEAYVHGEDISQHMDQVRNSLGLCPQQNLLFDHLTVSEHLYFYCR
                     IKGVPQKMYLEETNNMLSAFNLMEKCDAFSKSLSGGMKRKLAIIIALIGGSKVAILDE
                     PTSGMDPASRRSTWDILQTYKQNRTILLTTHYMDEADVLGDRIAIMVRGTLRCCGSSV
                     FLKRLYGVGSHLVMVKEPYCDIAEISKLIHSYVPTATLETNVGNELSFILPKEYTHRF
                     EALFTALEENQENLGISSFGVSITTMEEVFLKVSNLEDSKTDIEATQSPSVGSKGNKN
                     GDVESSGRVGFPTQSEDQNIVFNTGCSLYLQQFRAMFMKRLMYNWRNWRGILVQILGL
                     IISTFLLLKSHEFRYKKIRQMNLDEYGQTIVPFSIWGKSNLTSSLLTHLENMLKPGNH
                     QLKEVQGDLLKYLEGNDECVHLCVIALSIKVVANRVNLTVLFNNEAYHSPSLSLTVLD
                     NILFMSLSGSDASITVFNKPQPSPQRKEWPGSTDGKIVAFKIQLGMALLVSGFCILTV
                     TERHNKTKHMQFLSGVSILVYWLSALVFDLIIFFISCCFLLVMFKYCKFDIYVTDYHI
                     LDTMLILTLFGWSAIPLTYLLSFLFSKSNSAYINLLVFCYLSGTLSLLMDTIIEARIS
                     TIMSNSTQTFLLNALLLFPMYNLGKCISEYTVIYRKKMLCIQQKNALKYLNCSNKHTK
                     KNIYSLKKPMLGKYLIAMSIAGFVFLLLIFFWENISWKVKMFIHQHIYFGACKKYKPD
                     IISKELSGTSEDNDVENERREILYQPEKFLNCPVLIKELTKIYFKSPLILAVKNISLA
                     IQERACFGLLGFNGAGKTTTFQILTGENIPTAGDVFIDGISLTKNIVKVRSKIGYCPQ
                     FDALLEYMTGWEIMIMYARIWGISEHQIQPYVKKYLNSLDLESHANSLISTYSEGNKR
                     RLSTAIATMGKPSVIFLDEPSTGMDPRARRLLWDTVIKIRESGKAIIITSHSMEECEA
                     LCTRLSIMVRGRLTCLGSPQYLKNKFGNIYILKAKVKSGETLDEFKNFITLTFPGSEL
                     QQENQGILNYCIPRKNNSWGKVFGILEKAKEQYNLEDYSISQITLDQVFLSFADQDRK
                     "
     exon            223..487
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            488..615
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            616..766
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            767..1026
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1143
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1261
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1262..1435
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1436..1614
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1615..1749
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1750..1879
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1880..2034
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2035..2190
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2191..2401
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2402..2552
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2553..2651
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2652..2805
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2806..3097
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3098..3344
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3345..3549
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3550..3766
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3767..3940
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            3941..4119
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4120..4245
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4246..4440
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4441..4628
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4629..4799
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4800..4981
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            4982..5055
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            5056..5335
                     /gene="Abca15"
                     /gene_synonym="4930500I12Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagaaaga gcactaccct acaggacggt tagctaaggc cttgcttgtg tgcaggaaga
       61 gcttccagaa ctgggccata tgatgctctt cggtggataa ggcgctaagt ggtttaaggt
      121 tgcttaacta gagcagtagt gagttgaact ctgatcaaaa gaatggcttc atgggagtca
      181 agaaaacttt tgcttcttct gtggaagaac tttactttaa agaggcggaa gtttgggact
      241 ttagtttctg agatagtcct ggtgcttttg ctcagcattg tgcttttgac aacacgccac
      301 cttcttagta taaagaagat tgaagctctg tattttcctg accaacctat cagcactgtt
      361 ccttccttct tccgagcctc tgtcaccagt ttttatcctt gggagttggc ttatgtgcct
      421 tccaacatca tggtggtaga gaatattgtc aaaaatgtga aaaatgattt aaaccttcat
      481 atgaaagtta tagggtttcc ttcagaaagt gattttgaag attatgctag gtcaactgtc
      541 aactctagaa atattctggc tgctattgtg tttggccaca actttgcaaa cagcagtgat
      601 cctctgccaa agaaggtaaa atactacctg agatttagtg atattaagaa gaacataaat
      661 tctggggcat attatcaagg ggacacctgg cttacaaaat ttctctttca ttctttgcgt
      721 cttgtgggac ccagaaaccc atatgaagca gacggaggca gtcctgggta catcacggaa
      781 gggttcctgg ctgtgcaaca tgccctagac aaggccatca tgctacatca tggtggagct
      841 gatgcagcag cactcttcaa tgacattagt cttttcattc agagatttcc ataccctgca
      901 tattatcatg attacttcta tttatttgct actactttca tccctctaac agtggcctgc
      961 accttctttt ttaatcatta tgtcctagtt tggtccattg tgtgggaaaa ggaaaaccga
     1021 ttaaaggaat accagctcat gataggactg agaaactgga tgttctgggt tgcctatttc
     1081 ttcaccttcc tctgtctgta ttttattaac attatagtta tgtgcatggt tttatttgtc
     1141 aagattgaac ctgcgccaat cttccaatac aatgacccaa cccttgtctt catctttttg
     1201 ttattttatg ccatctcctc gatattcttc agttttatgg ttagcacatt gtttaataaa
     1261 gtcagtttgg ccatgagctt gggaagtttc ttatttttcc tcacctactt cccagctgtt
     1321 gcaatgcatc agagctttga gcgcatgcca tccaagcaga agctgatctg gtcctttgac
     1381 tttaatgttg ggatggcgtt tggatttaga ttcctagtca atacagacgc aaagaaaact
     1441 ggaatgaaat ggagtaacat attcctatcc acggattcag acagcttttt atttgcctac
     1501 gtgctaggga tgcttttagc tgatgctttc atatatggcc ttgtggcctg gtatatagaa
     1561 gctgtctttc caggagagta cggtgtgccc aagccgtgga attttttctt gatgcactct
     1621 tactggtttg gagaaccacc tcaacaaaaa ctagaaatca cccaatttta tgagagagtt
     1681 gaaagcaagt actttgaagc tgaaccaact gatttgacag caggcataca gatcaaacac
     1741 ctacacaagg tattccaaaa gaataacacc accaaggtcg ccatcaaaga cttgtctttg
     1801 aacttatatg agggacaggt cactgttctt ctaggacata atggggcagg aaaatccact
     1861 actctgtcca tcctctcagg tctctatcct ccgaccagtg gagaggccta tgtccatgga
     1921 gaagacatct cccagcatat ggatcaagtc aggaattcct tgggcttatg tcctcagcag
     1981 aacctgttgt ttgatcactt gacagtatcc gaacaccttt atttctactg caggataaaa
     2041 ggagtacctc aaaagatgta tcttgaggaa actaacaaca tgctgtcagc ttttaacctg
     2101 atggaaaagt gtgatgcatt ttcgaaatca ctgagcggag gcatgaagcg caaactcgcc
     2161 atcattatag ccctgatagg gggctccaag gtggcgatac ttgatgagcc gacatctggc
     2221 atggacccag cctcgaggcg gagcacctgg gatatccttc agacgtataa acagaatcgt
     2281 accatcctgc tgaccaccca ctacatggat gaagctgatg tgctgggcga tcgcattgct
     2341 atcatggtca gggggacctt acgatgttgc ggctcctcgg tcttcctgaa aagactatat
     2401 ggtgttggaa gccacctagt catggtgaag gaaccttact gtgacattgc tgaaatctca
     2461 aaactgattc attcctatgt cccaacagcc accctggaga ctaatgttgg aaatgagtta
     2521 tcttttattc tacccaaaga atatacacac aggtttgaag ctctctttac tgctctggaa
     2581 gagaaccaag aaaatcttgg catttctagc tttggtgtgt ctatcactac catggaagaa
     2641 gtcttcctta aggtcagtaa cctggaagac tcaaaaacag atatcgaagc tacccagtcg
     2701 ccctcggtag gaagcaaagg gaacaagaat ggggatgttg aaagcagcgg gagagtaggc
     2761 tttcccaccc agagtgaaga tcagaacatt gtgtttaaca ctgggtgttc cctctacctg
     2821 cagcagttcc gtgccatgtt catgaagagg ctgatgtaca actggcgaaa ctggagaggg
     2881 attttggtgc agatactggg gcttatcatt tctactttct tactcctcaa gtctcatgag
     2941 tttagatata agaaaattag gcaaatgaat ttggacgaat atggtcaaac cattgtgcct
     3001 ttttctattt gggggaaatc taacttgaca tcaagtcttt taacacacct tgagaatatg
     3061 ctaaaacctg gcaaccacca actcaaggaa gtacaaggtg acctactcaa atatttggag
     3121 ggaaatgacg aatgcgttca tttatgtgtt atcgcacttt ctatcaaggt ggttgcaaat
     3181 agagtaaacc ttactgttct gttcaacaat gaagcctacc attcaccatc tctatccctg
     3241 acagttttag acaacattct tttcatgtca ctttctggtt ctgatgcttc cataacagtc
     3301 ttcaataaac ctcagccaag cccccagagg aaagaatggc cggggagtac agatgggaag
     3361 attgtagcct tcaaaattca gctgggcatg gctcttttgg tcagtggctt ttgcatcctg
     3421 acggtgactg agagacacaa caagacaaag cacatgcagt ttctgagtgg ggtctccatc
     3481 cttgtgtact ggctttctgc tctggtattt gatctcatta tcttcttcat ttcttgctgc
     3541 ttcctactgg ttatgttcaa atactgcaaa tttgacatct atgtcaccga ctaccacatt
     3601 ctggacacga tgctgatcct cacactgttt gggtggtctg ccatccccct cacatacctg
     3661 ctgagcttcc tgttttctaa gagcaactct gcctacatca atcttctggt gttctgttat
     3721 ctctctggca ctttaagtct cttaatggat accataatag aagcaaggat atcaaccatc
     3781 atgtccaact ccacccaaac cttcctgctc aatgcgctgc tgctctttcc tatgtacaac
     3841 cttgggaagt gtatcagtga gtatactgtt atttaccgga agaagatgct atgcatccag
     3901 caaaagaacg ctctcaaata cctgaattgt agcaacaaac acactaagaa gaacatttat
     3961 tctttgaaga aacctatgct gggaaagtat ttaattgcta tgagcatcgc cggctttgtt
     4021 ttccttcttt tgattttctt ttgggaaaat atctcctgga aagtaaaaat gtttatccat
     4081 caacacattt actttggtgc ctgcaagaaa tacaagccgg atataatttc taaggaatta
     4141 tctgggactt ctgaagataa tgatgtagaa aatgagagaa gagaaatttt gtaccagcct
     4201 gaaaagtttc tgaattgccc agttcttatt aaggagctca cgaagatata ctttaagtct
     4261 ccactaattc tggctgtgaa aaatatctcc cttgctatcc aagagagggc gtgctttggg
     4321 ttacttggat tcaatggagc aggtaaaaca actacttttc aaattttgac tggagaaaat
     4381 attcctaccg ccggggatgt gttcattgat ggcattagcc tcaccaagaa catcgtaaag
     4441 gtcaggtcaa aaattggcta ttgtcctcaa tttgatgctt tgctggaata catgactggc
     4501 tgggaaataa tgatcatgta tgcaagaata tggggaatct cagagcatca gattcagccc
     4561 tacgtgaaaa agtacttgaa ttctttggac ctggagtctc atgccaacag tcttatcagc
     4621 acctacagtg aaggaaacaa acgtaggctg agcactgcca ttgccacgat gggaaagccc
     4681 tcagttatct tcctggatga accatcaact ggcatggacc caagagctag gcgccttctc
     4741 tgggacacag tgataaagat tcgtgaaagt ggaaaggcca tcattataac atcccacagc
     4801 atggaagaat gcgaagccct ttgtacaagg ctatccataa tggtgcgtgg gaggctcaca
     4861 tgcctgggta gtcctcagta cctcaagaac aagtttggta atatttatat tctgaaggcc
     4921 aaggtcaagt ctggggaaac attagatgaa tttaaaaatt tcatcacact gacatttcca
     4981 ggtagtgaat tacagcaaga gaatcaaggg attcttaatt actgcattcc cagaaagaac
     5041 aacagctggg gaaaggtgtt tggcattttg gagaaagcaa aggaacaata caatttagaa
     5101 gactattcca tcagtcagat caccctggac caagtcttct tgtcttttgc cgaccaagac
     5161 aggaagtgat tatgagacag aggttccttg agattccgtt acaaatagta atattgactt
     5221 ttcgtttttc tttttctttc tttctttctt tttttcctac atctgggtcc atgggaaggt
     5281 catcctgtgc ttgtgaatct tcatgtaaat atatttgtgt aataaatact tccct
//
