LOCUS       NM_001190444            1820 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus angio-associated migratory protein (Aamp), transcript
            variant 1, mRNA.
ACCESSION   NM_001190444
VERSION     NM_001190444.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Mugford,J.W., Yu,J., Kobayashi,A. and McMahon,A.P.
  TITLE     High-resolution gene expression analysis of the developing mouse
            kidney defines novel cellular compartments within the nephron
            progenitor population
  JOURNAL   Dev Biol 333 (2), 312-323 (2009)
   PUBMED   19591821
REFERENCE   3  (bases 1 to 1820)
  AUTHORS   Hayes,C., Rump,A., Cadman,M.R., Harrison,M., Evans,E.P., Lyon,M.F.,
            Morriss-Kay,G.M., Rosenthal,A. and Brown,S.D.
  TITLE     A high-resolution genetic, physical, and comparative gene map of
            the doublefoot (Dbf) region of mouse chromosome 1 and the region of
            conserved synteny on human chromosome 2q35
  JOURNAL   Genomics 78 (3), 197-205 (2001)
   PUBMED   11735226
REFERENCE   4  (bases 1 to 1820)
  AUTHORS   Brady,K.P., Rowe,L.B., Her,H., Stevens,T.J., Eppig,J.,
            Sussman,D.J., Sikela,J. and Beier,D.R.
  TITLE     Genetic mapping of 262 loci derived from expressed sequences in a
            murine interspecific cross using single-strand conformational
            polymorphism analysis
  JOURNAL   Genome Res 7 (11), 1085-1093 (1997)
   PUBMED   9371744
REFERENCE   5  (bases 1 to 1820)
  AUTHORS   Ramamoorthy,S., Leibach,F.H., Mahesh,V.B., Han,H., Yang-Feng,T.,
            Blakely,R.D. and Ganapathy,V.
  TITLE     Functional characterization and chromosomal localization of a
            cloned taurine transporter from human placenta
  JOURNAL   Biochem J 300 (Pt 3) (Pt 3), 893-900 (1994)
   PUBMED   8010975
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113473.20.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. The genomic coordinates used for the transcript record
            were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR3363660.1147107.1,
                                           ERR2680377.487422.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164141, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-236               AC113473.20        193721-193956       c
            237-395             AC113473.20        193104-193262       c
            396-515             AC113473.20        192312-192431       c
            516-655             AC113473.20        191629-191768       c
            656-800             AC113473.20        191245-191389       c
            801-884             AC113473.20        190954-191037       c
            885-1000            AC113473.20        190745-190860       c
            1001-1104           AC113473.20        190547-190650       c
            1105-1195           AC113473.20        190307-190397       c
            1196-1350           AC113473.20        190001-190155       c
            1351-1820           AC113473.20        189058-189527       c
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 38.53 cM"
     gene            1..1820
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /note="angio-associated migratory protein"
                     /db_xref="GeneID:227290"
                     /db_xref="MGI:MGI:107809"
     exon            1..236
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..1426
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="angio-associated migratory cell protein isoform
                     1"
                     /protein_id="NP_001177373.1"
                     /db_xref="CCDS:CCDS56631.1"
                     /db_xref="GeneID:227290"
                     /db_xref="MGI:MGI:107809"
                     /translation="MESESESGAAADTPPLETLSFHGDEEIIEVVELDPGPPDPADDL
                     AQEMEDVDFEEEEEEEEGNDEGWVLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLD
                     PKTNTLAVTGGEDDKAFVWRLGDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLL
                     KVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDCKTFQGPNC
                     PATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSL
                     ILTGSVDCQAKLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLA
                     AVGYLDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTG
                     RLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCVQRPDR"
     exon            237..395
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            396..515
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            516..655
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            656..800
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            801..884
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            885..1000
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            1001..1104
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            1105..1195
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            1196..1350
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     exon            1351..1820
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1797..1802
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /note="hexamer: AATAAA"
     polyA_site      1814
                     /gene="Aamp"
                     /gene_synonym="Aamp-rs"
                     /note="major polyA site"
ORIGIN      
        1 gagtcaccta cgcctacttc ctcccgggag gaggggctcg agttccgcgt cgtcgcgcag
       61 agctgactct gggaggcgtt tgggcccaga gaagtggatc ggtagctttc gccgcatgga
      121 gtccgaatcg gagagcggag cggccgctga caccccgcct ctggagactc tgagctttca
      181 cggagatgaa gagatcattg aggtggtaga gctggatcca ggcccgccgg acccggcaga
      241 tgatctggcc caggagatgg aagacgtgga ctttgaggaa gaggaagaag aagaagaggg
      301 caatgacgag ggctgggtct tggaacccca ggaaggggtg gtcggtagca tggagggccc
      361 ggatgatagt gaggtcacct ttgcattgca ctcagcgtct gtgttctgtg tgagcctgga
      421 ccccaaaacc aacaccttgg cagtgacagg gggcgaagac gacaaggcct tcgtgtggag
      481 gctcggtgat ggagagctgc tctttgagtg tgcaggccac aaagactctg tgacatgcgc
      541 tggtttcagt cacgattcca ccctagtggc cacaggggac atgagtggtc ttttgaaagt
      601 atggcaggta gacaccaagg aagaagtctg gtcctttgaa gcaggagacc tggagtggat
      661 ggagtggcac cctcgggctc ctgtcctgtt ggcgggcaca gccgatggca acacttggat
      721 gtggaaggtc ccgaatggtg actgtaagac ctttcagggc cccaactgcc ctgcaacctg
      781 tggccgcgtc ctccctgatg ggaagagagc tgtggtaggg tatgaagatg gtaccatcag
      841 gatctgggac ctcaagcaag gaaaccccat ccatgtacta aaagggactg agggtcatca
      901 gggccctctg acctgtgtag ccaccaacca ggatggcagt ctgatcctga ctggctctgt
      961 agactgccag gccaagctgg tcagtgccac cactggcaag gtggtgggtg tgttcagacc
     1021 tgagacagtc gcctcccagc ccagcctggg agagggggag gagagtgagt ctaactccgt
     1081 ggagtccttg ggcttctgca gtgtcatgcc tctggccgct gttggctatc tggacggaac
     1141 cttggccatc tatgacctgt ctacgcagac actccggcac caatgtcagc accagtcggg
     1201 cattgttcag ctgctgtggg aggctggcac tgctgtggtg tacacctgta gcctggatgg
     1261 tgttgtacgt ctctgggatg cccggactgg ccgcctgctt actgactacc ggggccacac
     1321 tgctgagatc ctggactttg ccctcagcaa agatgcttcc ctggtggtga ccacatcagg
     1381 agaccacaaa gcaaaagtat tttgtgtcca gagacctgac cgttaacagc tgtagcctct
     1441 ggcatggtgt ctggtgttaa gggggataaa gggacgcccc tgcccccagc agagttgcgg
     1501 ggtgcagagg gaagaggagg ggagaccact ggactgcttt ctgacccctt cagctgacct
     1561 gcttactcct tgtccttttc ctccctggag acccgccttg ccaggccctc cctcccctgc
     1621 ccagccctgg ggccttgtag gaggccgtgt ctctttgact ttgattcgct ggtgtgagcc
     1681 atggggtgcg tctttgtatg ttggggttag gtctttgagg ttcccgttct ttcccttccc
     1741 aactctctgg gaaaggaaag gaggaagaga gactagttac agattttaaa aatgtaaata
     1801 aaatatactt cccattggca
//
