LOCUS       NM_001012640             486 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus cDNA sequence AY761185 (AY761185), mRNA.
ACCESSION   NM_001012640 XM_486176 XM_909826
VERSION     NM_001012640.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 486)
  AUTHORS   Amid C, Rehaume LM, Brown KL, Gilbert JG, Dougan G, Hancock RE and
            Harrow JL.
  TITLE     Manual annotation and analysis of the defensin gene cluster in the
            C57BL/6J mouse reference genome
  JOURNAL   BMC Genomics 10, 606 (2009)
   PUBMED   20003482
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 486)
  AUTHORS   Patil A, Hughes AL and Zhang G.
  TITLE     Rapid evolution and diversification of mammalian alpha-defensins as
            revealed by comparative analysis of rodent and primate genes
  JOURNAL   Physiol Genomics 20 (1), 1-11 (2004)
   PUBMED   15494476
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC140205.2 and AY761185.1.
            
            On Apr 10, 2010 this sequence version replaced NM_001012640.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC141303.1, CR515527.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849376, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-38                AC140205.2         7646-7683
            39-323              AY761185.1         1-285
            324-486             AC140205.2         8538-8700
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 10.35 cM"
     gene            1..486
                     /gene="AY761185"
                     /note="cDNA sequence AY761185"
                     /db_xref="GeneID:100503970"
                     /db_xref="MGI:MGI:3630303"
     exon            1..210
                     /gene="AY761185"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..323
                     /gene="AY761185"
                     /note="CRS4C-6; defensin related cryptdin"
                     /codon_start=1
                     /product="CRS4C-6 precursor"
                     /protein_id="NP_001012658.1"
                     /db_xref="CCDS:CCDS40263.1"
                     /db_xref="GeneID:100503970"
                     /db_xref="MGI:MGI:3630303"
                     /translation="MKTLVLLSALVLLAFYVQADSTQETDEETKTDDQPGEEDQGVSV
                     SFEDPERYVLQVSGLGKPPQCPKCPVCSKCPQCPQCPQCPGCPRCNCMTK"
     exon            211..486
                     /gene="AY761185"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggctcctgt tcaccaatcc tccaggtgac tcccagccat gaagacactc gttctcctct
       61 ctgcccttgt cctgctggcc ttctatgtcc aggctgattc tacccaagag actgatgaag
      121 agactaaaac tgatgatcag ccaggggaag aggatcaggg tgtgtctgtc tcctttgaag
      181 acccagaacg ctatgttctt caagtttcag gcctaggaaa gcctccccag tgcccgaagt
      241 gcccagtgtg ctcaaagtgc ccacagtgcc cacagtgccc acagtgcccg gggtgcccga
      301 ggtgcaattg catgacaaaa tgaaactgca attgtcacca aaggtcctaa tagacagcat
      361 aaatagacag cagctgaaca tggaatccgg gtccagaaaa tcatttgctc ttggacctca
      421 agatctgtca atacccttgt gcttagcttt gactgtttca ttctccaata aatttcatgc
      481 agaaaa
//
