LOCUS       NM_001402008            3531 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus expressed sequence AI854703 (AI854703), transcript
            variant 4, mRNA.
ACCESSION   NM_001402008
VERSION     NM_001402008.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3531)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   2  (bases 1 to 3531)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154013.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK038960.1, BC145740.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate :: translation inferred from conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-358               AC154013.4         116648-117005
            359-1235            AC154013.4         117564-118440
            1236-1379           AC154013.4         118608-118751
            1380-3531           AC154013.4         119976-122127
FEATURES             Location/Qualifiers
     source          1..3531
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 23.61 cM"
     gene            1..3531
                     /gene="AI854703"
                     /gene_synonym="AI182503; D630044C04"
                     /note="expressed sequence AI854703"
                     /db_xref="GeneID:243373"
                     /db_xref="MGI:MGI:2141510"
     exon            1..358
                     /gene="AI854703"
                     /gene_synonym="AI182503; D630044C04"
                     /inference="alignment:Splign:2.1.0"
     exon            359..1235
                     /gene="AI854703"
                     /gene_synonym="AI182503; D630044C04"
                     /inference="alignment:Splign:2.1.0"
     CDS             387..998
                     /gene="AI854703"
                     /gene_synonym="AI182503; D630044C04"
                     /codon_start=1
                     /product="zinc finger protein LOC728743 homolog"
                     /protein_id="NP_001388937.1"
                     /db_xref="GeneID:243373"
                     /db_xref="MGI:MGI:2141510"
                     /translation="MTELVSSRGGSPTGDGEEGLGDDQGLVIHHPAEEQCHRCPLCGQ
                     TFSQQPSLVRHQKAHVGAGRAAAFVCPECGKAFSVKHNLEVHQRTHTGERPFACPECG
                     RCFSLKQNLLTHQRIHSGEKPHQCAQCGRCFREPRFLLNHQRTHARMPTPHPRRPGVF
                     GERRPYFCPRCGKSFAREGSLKTHQRSHGHGPESQAAHLSRVL"
     exon            1236..1379
                     /gene="AI854703"
                     /gene_synonym="AI182503; D630044C04"
                     /inference="alignment:Splign:2.1.0"
     exon            1380..3531
                     /gene="AI854703"
                     /gene_synonym="AI182503; D630044C04"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tagttgctga gccgctagta tagtgaaaca ttttcaattt caacagtgag tcaggagact
       61 tagggcctag tcctggctca ccttgctgtg tgaccttgga caagtatgtt ggtttctccc
      121 agcttcagtt gttccattta caaacctggg ctcagggacg ctgttctccc tgttcaagga
      181 tgttgtgagg gtagtgggga actatttcag agaggcctag tggcctggga agacaatctt
      241 tacaccaggc atgatgggag cccagtgctg gggtgatgag tgtggtggtc agcctttgga
      301 ccaggcttgt ctccttggga gctcttgctt tggttcagtg atctgcagct tttcaaatga
      361 gctggtgatt gcatctggaa gtgcccatga cagagctggt gtcctccagg ggagggtccc
      421 ctacagggga cggggaggag ggtctggggg acgatcaagg cctggttatc caccacccgg
      481 cggaggaaca gtgccaccgc tgcccactgt gcgggcagac cttctcccag cagcccagcc
      541 tggtgcggca ccagaaggcg cacgtggggg ctggccgcgc agccgccttc gtgtgtcccg
      601 agtgcggcaa ggccttcagc gtcaaacaca acctggaggt gcaccagcgc acgcacaccg
      661 gcgagcggcc cttcgcctgc cccgagtgcg gccgctgctt cagcctcaag cagaatctgc
      721 tcacgcacca gcgcatccac agcggcgaga agccgcacca gtgcgcgcag tgcggtcgct
      781 gcttccgcga gccgcgcttc ctgctcaacc accagcgcac ccacgcgcgc atgcccacgc
      841 cgcacccgcg ccgtcccggt gtcttcgggg agcggcgacc ctacttctgc cctcgctgcg
      901 gcaagagctt cgcgcgtgag ggttcgctca agacccacca gcgcagccat ggccacgggc
      961 ccgagagcca agcggcccat ttgagccgtg tgctatgacc tgtgggagac ctgctaccac
     1021 cagctgtctc caatccagaa gccacatcca agggtgctaa attgcagtgc cctgtctgga
     1081 tgggctcctg ggagggggca gggccagctt agggtgttga aaggcctccg ggccacccct
     1141 cccccttgtc ttcctgccct tggacccctt ggctggctgc atgtatctgc tttgggcacc
     1201 tgcattaatt tgcctcctcc ggctgcctag agcagcatgt cagacttgaa agctacttgg
     1261 agaaggtcac ttgccacggt tcccagaccc aagctcggtc cccaaagcct cagcctcctg
     1321 tacccactgc ctggtggcct tgagaagcca ttccactcca tgtctcagtt tgcttatcta
     1381 tacgaagcca acaggacctc atggcccaga acctgcaggg cgcatctggg catggaaact
     1441 aaaactggag tctcgtaggt cctgggttcc tgacctgaag acacgtctcc tcagaagtcc
     1501 tacctctgga ggtgccctgt gttggtagag catgggatta gaggctgatt ccatgccttg
     1561 gtgggaagac tccccagatc tgacttgtca cagctgggca agcctcattt ggcttcctga
     1621 tcctagacct cagctcgggg gtggaggcag acatcacctg tgtggagaag tggcttctct
     1681 cctccagcct ggctcagccc ttggttgaag ggcaaggaca aggtgtgact gttgtgtacc
     1741 gttgcagcaa gttgatggca gactgggctc aagaggcaaa acttccctga tgacatggag
     1801 agcacgtgaa ggcttccatg cccgttccca gctagacagg tgactgcttc aggggcttgt
     1861 ggccctttaa gtggaggctg tggacctcgt cctagaactc gcgtactcat ggaactctca
     1921 gagtgccaag cagtttcagg agcctctgga ctccagccta aagacctcag ccctggggag
     1981 tccatcttcc atcctttccc tactccacac aagtgtgacg ctctcctggt ctcctcttgt
     2041 ttgggaataa agaattctga ggctgagccc cttttagtcc atccaatccc tttctcttca
     2101 atctgacagc accccaaatt tctggagcca ggcttccctc cccagacact gcccaagact
     2161 gactcctggg cttggttcct tttccctgtt ttgtgtcgga caggatgtag ggttttacag
     2221 tggagccctc tgcttgcctt tggctctaac ttccctgtgg agtctcaagg gaaggttggc
     2281 ctgctgaagg gatggtaaat aattttctct gtgtctgttc ctcgggaaag gaatcgtact
     2341 tccactagcc atatgcaaac aattggacct cctagctggg caggcttgca gctccaggca
     2401 ggtatcacct gggaaggtgg gggttgcagg gcaccagaac cctgcacatg gtgggtctaa
     2461 gcagtgggaa aagccagtgg aggagttgca tgtgtctcct aagtaagcag gggtacaact
     2521 tggagatgag ggtcttgggc cactgctggt caaggactca tatccttaca tattagcccg
     2581 tcagtcgaga gcccacaact gtctccctcc cttcctagaa tgagccactc attaggaaag
     2641 ggggaggggc tttcttttct atcaggactt ggtagaaacc tctggattcc tgacttgggg
     2701 tcttactgcc tgcattcccc atgcagtttg ggttacaagt tcctactgaa cccctatgcc
     2761 ttattctggg gtcactgagt actcaaagag atcagagaaa gggaaggcgc tacccatacc
     2821 atgggaactt ccatgcaccc tcttttctaa cttagggcga ctttcaccat gcctctcagc
     2881 taactgccca gcttgtctca tccccactgt aactgagcca tgccttccct tgtcctgctc
     2941 tgaaatgttc ttcccctagc ctctaaaccc acttattcac cagggccaag cctctcagcc
     3001 tacccagccc atgttcctta acagtcctcg tgttaataca tggtgtctcc ctgagtatca
     3061 tgtgctgttt aatcttgtgc ttgtttcttc tgtgtttgtg tatgtatacg tgctgtgtgt
     3121 gcccgtgtgc accttgagtc cccaactaga ctgtgagctc cctgagggca aggggctgtc
     3181 atttcttctt caacttctag tgggtctagc ccaagaacct ctcagaagac aactggatga
     3241 aacacatgct ggaggtcatc tgaggtggag ggttgtgtgc atggggagag tccacatggc
     3301 ttagcaagag gtctatgctg ttgggctatg gcctgacccc ttggatcaac aatggatgct
     3361 caaggtctca catccttgca aattggaggt agtagaaaca ggagggacac cccctccccc
     3421 aacacagata gaccatggct acaccggagt gcacatgaat ggttggatat tcccaaaggt
     3481 ccctgatatc tgttggagga ggtgactcaa ataaatgttc tctacaacag a
//
