LOCUS       NM_001039220            1974 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus expressed sequence AI429214 (AI429214), mRNA.
ACCESSION   NM_001039220 XM_885456
VERSION     NM_001039220.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY294724.1, AK161334.1, AK132736.1 and BE956615.1.
            
            On Mar 4, 2009 this sequence version replaced NM_001039220.2.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                BY294724.1         2-29
            29-1160             AK161334.1         23-1154
            1161-1957           AK132736.1         1134-1930
            1958-1974           BE956615.1         1-17                c
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 23.15 cM"
     gene            1..1974
                     /gene="AI429214"
                     /note="expressed sequence AI429214"
                     /db_xref="GeneID:621080"
                     /db_xref="MGI:MGI:2142538"
     exon            1..1959
                     /gene="AI429214"
                     /inference="alignment:Splign:2.1.0"
     CDS             126..1007
                     /gene="AI429214"
                     /codon_start=1
                     /product="uncharacterized protein C8orf48 homolog"
                     /protein_id="NP_001034309.1"
                     /db_xref="CCDS:CCDS22250.1"
                     /db_xref="GeneID:621080"
                     /db_xref="MGI:MGI:2142538"
                     /translation="MGWPPAQKPEDSKEEHGGPAQTDVCATQVSEEFPGSCADEVLSS
                     GSISFSGELQSYSHTSESPVETKTPTTSSEEQDEQSELSLLQKDENKLSEMWINHLKS
                     KEIHSERSQPDRRLPPEIPKESAEELDALQSFCTKKVNLIHQRQDLRAKKSNRPKRLQ
                     LRWIAETSEVDAFNCTIPDELWNRIYLENTRATLAYIGAITQHISSQCPSCNSKRAEL
                     AQSDFLRRRKTLLQSLLLQEKIDEHLHTTDFLTRVGEAHQGFPRLSDDPRIIWKRLTE
                     KMLKGSSGFGRAYSKQV"
     regulatory      1938..1943
                     /regulatory_class="polyA_signal_sequence"
                     /gene="AI429214"
                     /note="hexamer: AATAAA"
     polyA_site      1959
                     /gene="AI429214"
                     /note="major polyA site"
ORIGIN      
        1 atacccggaa gaagaagctc gcggcactca actacaccaa agattgtgcc ctgtcggctc
       61 ctctttactg gttccagacc catttttgac cagagcaaag cagatgagga actgagtccg
      121 agacaatggg gtggccacct gctcagaagc cggaggactc aaaagaagag cacggaggcc
      181 cggcccagac ggacgtctgt gctactcaag tttcagaaga gttccccggg tcctgtgcag
      241 atgaggtact gagttctggt tccatcagct tctctggaga attacaatcc tattcacaca
      301 cctctgagag cccagtcgag accaaaacgc cgactacaag ttcggaagag caagacgagc
      361 agtcagaact ttcactctta cagaaggatg aaaataagct gagtgaaatg tggatcaacc
      421 atctcaagag caaagaaatt cattctgaaa gatctcaacc cgaccgtaga ctcccaccag
      481 aaatccctaa ggaatccgca gaagaactgg atgccctgca gtctttttgt actaaaaaag
      541 taaacttgat tcaccagaga caggatttaa gagctaagaa aagcaacaga cccaaaaggc
      601 tgcagctcag atggattgca gagacctcag aggtagatgc tttcaattgt acgatccctg
      661 atgaactgtg gaacagaatc tatttggaaa acacgagagc gactctggcg tacatagggg
      721 cgattacgca acacatttct tcgcagtgtc ccagctgtaa tagcaaaaga gcagagctgg
      781 ctcagtctga cttcctgaga cgaaggaaaa ctttactgca gtcactacta ctccaagaga
      841 aaatagatga acaccttcat accacagact ttctcacccg tgttggagaa gcacatcagg
      901 gcttccccag gctttcagat gatcctagga tcatctggaa gcgactgact gagaaaatgc
      961 tgaagggaag ctccggcttt gggcgggcat attcaaagca ggtgtaggaa gactgtacaa
     1021 gtctttttaa tgattctcaa ctcacacgtc caaccagata ggaggtgctg actactaatg
     1081 atgatatgta ctatgcccaa ccaggggatg gtgactattg gtgattagtg ataacatgtg
     1141 ttgtgcatac atgtacctgg tgtggatttg agtaattacc atctcatata gaggaaattt
     1201 agaaactaat gtaagattta cttctgcttc cttcactgaa gtctaaatca ttaaatccaa
     1261 tagatttttc acattatgga agacaattgg agaaattgca aaacttttgt aatctagggg
     1321 aatatatata tatatatata tatatatata tatatatata tatatatgta tgtatatgtg
     1381 tgtgtgtgtg gtattctctc tatacacaca cacacatatg aatgatggta gtttggagtg
     1441 gtggtggaca gtacagagag aaagaagtaa acagatataa gatagttagg aagcagcgat
     1501 gagggctggt tttggtgata aagaggctgt ggagactaac tttgaaaagg cactaggatt
     1561 ttgacttgtg tacctgtgta ctcgactgaa tagtaatttc cttaagacag aattctattt
     1621 agtttctgtc aacttgacaa aaactagagt cacttgtgga gaggaaacct caactgagaa
     1681 attgcctttc tccaccggtc tccaggcatt tctgagggag catttacttc cttaatgatt
     1741 gaggcgggag ggtttgtgcc actgccatcc ttagtcaggt agtctcaggc tgtgtaacat
     1801 ggcaagctca gcaagatatg gaaagcaagc cagtaagtca catttcccca tgcgttctgt
     1861 ttagtccttg cccaaaagtt tctgccttca cttcctgtct ctgcatccct ctatgaccta
     1921 caataaccta ttaactaaat aaaactgttt cttctctaaa aaaaaaaaaa aaaa
//
