LOCUS       XM_030243910            2590 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus RIKEN cDNA 9530057J20 gene (9530057J20Rik),
            mRNA.
ACCESSION   XM_030243910
VERSION     XM_030243910.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..2590
                     /gene="9530057J20Rik"
                     /note="RIKEN cDNA 9530057J20 gene; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 9 long SRA reads, 1 Protein, and 64% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:78672"
                     /db_xref="MGI:MGI:1925922"
     CDS             262..2505
                     /gene="9530057J20Rik"
                     /codon_start=1
                     /product="cell surface glycoprotein 1"
                     /protein_id="XP_030099770.1"
                     /db_xref="GeneID:78672"
                     /db_xref="MGI:MGI:1925922"
                     /translation="MLLEHNVDIEAKTEYGLTPLQLATFEQKPEMVEFLAAKCAKSSV
                     TPSWSPSPTVSPCPSSTSPLSSLGLPVCPNPGTSSLSEDRKSSSARRIKLSTGSSAQR
                     TEVKHVRFNEEVLYFKEERPLSCEARPPGQLKSILKNTVQYNTVNEKITRRTSLWCSK
                     AEDVRYTSCIKVRGNKPPIFRTFPRKHRIHVLEAPGDIEPTHSTCATDSRAPADAEPN
                     SSTCAAVNGAPAGVEPTTSSQCAPDCEDPAVIEPTHSTCAADSRAPADAEPNSSTCAA
                     VNGAPADVEPTTSQLVPDSGAPADVEPTTSHCAPDCEDPAVIEPTHSTCAADSRAPAD
                     AEPNSSTCADVNGAPADDEPNSSTCAAVNGAPADDEPTTSQCVPDCEDPAVIEPTHST
                     CAADSRAPADAEPNSSTCAAVNGAAADAEPTTSSQCAPDCEDPAVIEPTHSTCAADSR
                     APADAEPNSSTCAAVNGAPADVEPTTSQLVPDSGAPADVEPTTSQCAPDCDDPAVIEP
                     THSNCAADSRAPADAEPNSSTCAAVNGATADVEPTTSQLVPVSGAPADVDPTTSQCAP
                     DCEDPAVIEPTHSTCAADSRAPAHIEPTPSQLAPDRGAPADVEPTHSTCAADTRIPAD
                     IEPSPSQCAPDSPAPSDIGEEPSPVADPDEDIAEDFYDALESSDHTGHSGSTVQVPGF
                     LWEPDMLLLPVMPLMWFLTFLLSMMMWIRNGIRKCATKKMAKDLPPREKINPMPLELN
                     TPTHTDI"
ORIGIN      
        1 ctttccattt gcaggacttc gctgcattat gcatgtgccc acaaccatcc agacgtggtg
       61 acactattat tagaaaataa ttccagcatt aacatccggg atgatgaagg ctgcacaccc
      121 ttgattaagg ccacccaacg agacaatgtg gattgtgctt ccgtattgct cacccacaat
      181 gcggatccaa atctgataga ttccagtggg aacacagcct tccaccatgc tatatccagg
      241 ggtaacataa ggattgtaaa aatgctcctt gagcacaacg tagacattga agccaaaaca
      301 gagtatggct tgacaccatt gcaacttgca acatttgaac agaaacctga aatggtagaa
      361 tttttagcag caaagtgtgc aaaaagctca gtgaccccct cctggtcacc cagtcccaca
      421 gtctctccct gcccctcctc cacttcacct ctgagcagtt tgggactccc tgtatgtcca
      481 aaccctggca cttcgtctct ctctgaggac agaaaaagta gctcagctag aagaataaaa
      541 ctgagtactg gatcgtcagc tcagagaact gaagtgaagc atgtcaggtt caatgaagaa
      601 gtcttatact ttaaagagga aaggcctttg tcctgtgaag caagaccacc aggacagctt
      661 aaatctatct tgaaaaacac tgtccagtat aatacagtta atgagaaaat tacaagaaga
      721 acatcactgt ggtgttcaaa agcagaagat gtcaggtata cttcctgtat caaggtgcga
      781 ggaaataaac cacctatttt ccgtaccttt cctcggaagc atagaattca tgtgcttgag
      841 gctcctggtg acattgagcc aactcattcc acctgtgcta ctgacagcag ggctcctgct
      901 gatgctgagc caaattcttc cacctgtgct gctgtcaatg gggctcctgc tggtgttgag
      961 ccaactactt cttcccagtg tgctcctgac tgtgaagatc ctgcagtcat tgagccaact
     1021 cattccacct gtgctgctga cagcagggct cctgctgatg ctgagccaaa ttcttccacc
     1081 tgtgctgctg tcaatggggc tcctgctgat gttgagccaa ctacttcaca acttgttcct
     1141 gacagtggtg ctcctgctga tgttgagcca actacatccc attgtgctcc tgactgtgag
     1201 gatcctgcag tcattgagcc aactcattcc acctgtgctg ctgacagcag ggctcctgct
     1261 gatgctgagc caaattcttc cacctgtgct gatgtcaatg gggctcctgc tgatgatgag
     1321 ccaaattctt ccacctgtgc tgctgtcaat ggggctcctg ctgatgatga gccaactact
     1381 tcccagtgtg ttcctgactg tgaggatcct gcagtcattg agccaactca ttccacctgt
     1441 gctgctgaca gcagagctcc tgctgatgct gagccaaatt cttccacctg tgctgctgtc
     1501 aatggggctg cagctgatgc tgagccaact acttcttccc agtgtgctcc tgactgtgag
     1561 gatcctgcag tcattgagcc aactcattcc acctgtgctg ctgacagcag ggctcctgct
     1621 gatgctgagc caaattcttc cacctgtgct gctgtcaatg gggctcctgc tgatgttgag
     1681 ccaactactt cacaacttgt tcctgacagt ggtgctcctg ctgatgttga gccaactact
     1741 tcccagtgtg ctcctgactg tgatgatcct gcagtcattg agccaactca ttccaactgt
     1801 gctgctgaca gcagggctcc tgctgatgct gagccaaatt cttccacctg tgctgctgtc
     1861 aatggggcta ctgctgatgt tgagccaact acttcacaac ttgttcctgt cagtggtgct
     1921 cctgctgatg ttgatccaac tacttcccag tgtgctcctg actgtgagga tcctgcagtc
     1981 attgagccaa ctcattccac ctgtgctgct gacagcaggg ctcctgctca catagaacca
     2041 actccttcac aacttgctcc tgacaggggt gctcctgctg atgttgagcc gactcattcc
     2101 acctgtgctg ctgacaccag gattcctgct gacatagaac caagtccttc acaatgtgct
     2161 cctgacagtc ctgctccttc tgatattggt gaggaaccca gtcctgttgc tgacccagat
     2221 gaagatatag ctgaggactt ttatgacgct ttagagtcat ctgatcacac tggccatagc
     2281 gggtccactg tccaggtacc tggttttctt tgggaaccag atatgctact gctgccggta
     2341 atgcccttga tgtggtttct tacattcctg ttatcaatga tgatgtggat tagaaatgga
     2401 attcgcaagt gtgctacgaa gaaaatggcc aaggacctcc ctccaagaga aaagataaac
     2461 ccgatgccgc tggagctgaa cactccaaca cacactgata tatgaagaca aagtgtgtga
     2521 ggaggaagtt tattatgtat atgtaaatat aaaaatttta tatataaata aaatgtttta
     2581 tctgttagaa
//
