LOCUS       XM_036161741            3603 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus RIKEN cDNA 9430078G10 gene (9430078G10Rik),
            mRNA.
ACCESSION   XM_036161741
VERSION     XM_036161741.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3603
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..3603
                     /gene="9430078G10Rik"
                     /note="RIKEN cDNA 9430078G10 gene; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 21 ESTs, 4 long SRA reads, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:115489041"
                     /db_xref="MGI:MGI:3588259"
     CDS             1..1257
                     /gene="9430078G10Rik"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit 4"
                     /protein_id="XP_036017634.1"
                     /db_xref="GeneID:115489041"
                     /db_xref="MGI:MGI:3588259"
                     /translation="MDTVLVQERSKIPNTDKIKSQTSSSVFLCINPVSREGSERPGKE
                     ETVTESNLLFWLLQTPRPRRQGSKTTRLLPQAGGQQPQPETRVNRAAGNTLLSVPSAG
                     HSRYRSPGTAADQLRPARPTLPAPPGPPERGPRPRGAERAGAAKRPDRGPSAAFASSP
                     EPGLRAAGRSPVHPQLLPSSRGGTPGDGPPDVALPREEPTAREGNNRDGPGNWKGALR
                     PAAAAAAAAGEGCCFPHTGGSAEAAAAILNPSDSHIHTAPPASLRRRPLFTTTPSLPS
                     PLHPHLFRASLRVLPLSGTHVNAHASLPPPHPAPSTTDTPPERARADCVGLESPAPRD
                     ADAVPRPPPLASARTPSGRPTAPAPCPPPLRSPARPGACACAPVASLLRARSLSPPHP
                     HTDTHAHTDARARAHTHTHTHSQLRR"
ORIGIN      
        1 atggatacgg ttcttgtcca agagagaagt aaaattccaa acacagacaa aataaaatcc
       61 caaacgtcgt cttcggtatt tctgtgtatt aacccagtat ccagagaagg gtcagagcga
      121 cccggaaaag aggaaacagt tactgaatca aacctcctct tctggctttt acagactccg
      181 cgtccgaggc gtcagggaag caagaccact cggctactcc cccaagctgg cggtcagcag
      241 ccccagcccg agacccgggt caaccgggcc gcgggaaaca ccctcctctc ggtaccctca
      301 gccggccaca gccgctaccg aagcccagga accgcggccg atcagctgag acccgcccgg
      361 ccgacgctcc ccgcgccgcc cggccccccg gaacgcgggc cccggccccg gggggcggag
      421 agggcgggag cagcgaagcg ccctgaccgg gggccttcgg ctgcctttgc gtcgtcccct
      481 gagccggggc tccgcgctgc gggacgatcc cccgtacacc cccagctact ccccagtagc
      541 agaggaggga ctccggggga tgggccccct gacgttgccc ttccacgcga agagcccact
      601 gcccgggagg gaaacaaccg cgacgggccc gggaactgga aaggtgctct gcggcccgcc
      661 gccgccgccg ccgccgctgc cggggagggg tgttgtttcc ctcacacagg aggatccgct
      721 gaagcagccg ccgccatttt gaacccgtca gattctcaca tacacacagc tcctccggcc
      781 tcactgcgca ggcgccctct cttcaccacc accccctccc tcccgtcgcc tctccacccc
      841 cacctctttc gagcctccct gcgcgtctta ccgctctccg ggacacacgt gaacgcgcac
      901 gcgtcactcc ccccacccca ccccgccccc tctaccacgg acacaccgcc ggagcgcgca
      961 cgcgccgatt gcgtcggcct cgaatcgccc gcgccccgcg acgccgacgc ggttccccgc
     1021 cctccccccc tcgcgtcagc ccgcacgccc tctggccggc ctaccgcccc cgctccctgc
     1081 ccgcctcctc tcaggtcgcc ggctcgaccg ggtgcctgcg cctgcgcgcc agtcgcgagc
     1141 ctcctccgcg cgcgctctct ctctccccca cacccgcaca cagacacaca cgcacacaca
     1201 gacgcgcgcg cgcgcgcaca cacacacaca cacacacact cgcaacttcg ccggtgaccc
     1261 cgcccaccgc cggccagctg cgccagccgc cctccctccc ccactactct agggagggtt
     1321 gtgacccccg acccccacaa aacacagcac cccgccccaa gcagtaggaa gcatctcccc
     1381 ttccccttcg agccacctct gctgggtggt cagacgggtc acacaaacgt gggccagacg
     1441 gcctgggtca gggcagccgt tggccgcttc aacgcggggt cccccggggt catgccatgg
     1501 gagcgggcca gagccgggtg ctgtgctcgg gtcttgtcag acccagggag tgcacggaaa
     1561 gaagcgccct cccgccgggc gccctccctc acgcgccggc cggccgaggc ccacctgctc
     1621 gccatcccgg agtaggcccc tgcgcccccc gctgcagggc ctggccgccc ttagcacggg
     1681 gggagctcct gtccgtgcag cgaaccggtt tcgcctcacc cactcctcgc cgctccgaag
     1741 gggcaggaac cggtagcagt agcatgtctg tcccgagctc tgttccctca gggcagctcc
     1801 agacgcttga caagggagtc cacaggtgct gtgcgcgaca gtgggatcca cgacggctca
     1861 ggggtggcag cagctagcac accccactgc gggccgcagg ctcccaggga ggtggcccag
     1921 ggagcccctg ctgttggcca cgctcaggtt tccgtagcgc cggtgccctc ggcggcccgg
     1981 gtgggacgtg accccgcccc cggcgagtcg gggcaccccc cacggagagg ggcgcgggcc
     2041 gcccctaacc ccagggccgc ggcttgcgag ggaggcccag ccgagaaaat gtctccggtt
     2101 tgtgtgcgca gcttcgcgcg agggtcagcg atggggcagc ggcggcccaa gctgctcggc
     2161 cctgccgacg aaccggctcc cgcggctcga cagccgcccg acgggcaagc gggctccgga
     2221 cgtcgacgga gcccagccag aggtaacagc aatgccatgc gagcagccca actgcgctca
     2281 gggcagttcc ccagccaatc tcgtgctttg aggcccgttt aaattgtaaa tcccacaaag
     2341 gacggtggcc tggacgctac acatccaagt gcttgaggtt ggcactttcc ccttgctgac
     2401 tggtgtcaca tttttttctc cctgccttgg tttccaactc ttcaccttga ttctgaagag
     2461 tctgggttgg aagaggaaga ctaccgtggt agagctatca taataacgtt cgtaaacagc
     2521 cttctaggtc ttttaggaag acgttagtgg ccgacagttg gaaaaaatga tactttcttt
     2581 tgctatcaca gtttgaactg gggtaaagaa agacactcct taaatccaaa gtattactta
     2641 atacagcaaa aagttttgca cacaggattt taacagacat tctctgctgc ttttcacatc
     2701 tttagtagac aagagaaaga gctttgtgtt tctaaactcg ttttaaaact aaacaatggg
     2761 aatataagat taaacgtgtg catattactg tgatagaggt tcacagctct gcaactgcca
     2821 acagaaacat ctcacaacaa aagtgattgg tttgtatggt ctcattatct tgcagccagg
     2881 cactgagcaa agtcacttta ttctgatacc agttgctttt cagacttttt agagcattgc
     2941 ttcgaagagt cactgtcaga aactttgcca gattgaaggc ctcttttggt gttccaggct
     3001 atagtaaaat atgttttaaa ctagtactct tacccgtgtg gtgactcaca cttgggaggc
     3061 aatcctagga ctccacagag gctgaggcag gaagagtccc ataagttaaa agccaaccta
     3121 tgtggataat gaattcaggt cagcttggcc ttacagagtg caaccctgtc tcagaaaaag
     3181 gcggtagtct tttatatcca gtggcaggtg tggccccaaa gacatcagga tttttgtagc
     3241 tataaaacaa aaatctcaac tacactacag taggggaact gactaaacaa tactgtctct
     3301 acaggctggc tgccatctac caaagcagat ggcccatcgt attaccccaa atcatagtgg
     3361 ctctgatggg taggggcaga tctgggagga ctactgtttt gcctttaatc attccagaag
     3421 tctagaactg gggcagttcc ccaagaaggc cactagacct ttgaactatg gagctaaaga
     3481 aagaggagat aagtggttta tgagaaggaa gaaaaaaaat cctagaagcc ttgataaaat
     3541 ggtccctatc tggaatcatc tggtatctta ataaactgta aactcatttc agctttttat
     3601 gca
//
