LOCUS       NM_177205               2660 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 9430015G10 gene (9430015G10Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_177205
VERSION     NM_177205.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Dietrich JE, Panavaite L, Gunther S, Wennekamp S, Groner AC, Pigge
            A, Salvenmoser S, Trono D, Hufnagel L and Hiiragi T.
  TITLE     Venus trap in the mouse embryo reveals distinct molecular dynamics
            underlying specification of first embryonic lineages
  JOURNAL   EMBO Rep 16 (8), 1005-1021 (2015)
   PUBMED   26142281
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Tang T, Li L, Tang J, Li Y, Lin WY, Martin F, Grant D, Solloway M,
            Parker L, Ye W, Forrest W, Ghilardi N, Oravecz T, Platt KA, Rice
            DS, Hansen GM, Abuin A, Eberhart DE, Godowski P, Holt KH, Peterson
            A, Zambrowicz BP and de Sauvage FJ.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
REFERENCE   3  (bases 1 to 2660)
  AUTHORS   Hackney JA, Charbord P, Brunk BP, Stoeckert CJ, Lemischka IR and
            Moore KA.
  TITLE     A molecular profile of a hematopoietic stem cell niche
  JOURNAL   Proc Natl Acad Sci U S A 99 (20), 13061-13066 (2002)
   PUBMED   12226475
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928667.4, BY727027.1, CO803636.1 and CA945382.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants encode the same protein.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.3477142.1,
                                           SRR11927935.611519.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                AL928667.4         45191-45211
            22-555              BY727027.1         1-534
            556-702             CO803636.1         522-668
            703-1193            CA945382.1         104-594
            1194-2660           AL928667.4         60990-62456
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 88.33 cM"
     gene            1..2660
                     /gene="9430015G10Rik"
                     /note="RIKEN cDNA 9430015G10 gene"
                     /db_xref="GeneID:230996"
                     /db_xref="MGI:MGI:2444364"
     exon            1..176
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            177..289
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            290..383
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             312..911
                     /gene="9430015G10Rik"
                     /codon_start=1
                     /product="uncharacterized protein C1orf159 homolog
                     precursor"
                     /protein_id="NP_796179.1"
                     /db_xref="CCDS:CCDS19059.1"
                     /db_xref="GeneID:230996"
                     /db_xref="MGI:MGI:2444364"
                     /translation="MALQCLLLLTGLLTGGVCKSTESQAQQPECCMDVVDFNATCLGT
                     GLCGPGCYRHWNADGSASCVRCWNGTLPTYNGSECRILTGRGVQLPMNRSTGTPGQPH
                     FGGPHVAASLFLGTLFISTGLILSVAGFFYLKRSSKLPEVFYRRDRAPVLQPGETAAM
                     VPLPQSSVRKPRYIRREQHPDKNRDPSAFSTVEAHISNV"
     exon            384..459
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            460..555
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            556..621
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            622..756
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            757..782
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            783..813
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            814..2660
                     /gene="9430015G10Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tacgaaagga gctcggctgg cgagtggtga gtgagggccc tgctctggcg gaggtggcgg
       61 ctgcagcgac gccgtaaagg ccgcgggtag cgcagactct gggactctga gactaatgca
      121 gggcctagcg gggcagcgcc tccctcgctg cctgccatct tgtcagtgag gaggcgaatt
      181 cctctatcta ggaagctcag actactattg ttccagaatt ggaaatgccc agcttgcctg
      241 ctccttcaat gcttcggggg ccgctgctaa gtaaaaagtc ttcatagaga tctccttgtc
      301 agctccccag catggcactg cagtgtctcc tgctcctgac tggccttctg acaggaggcg
      361 tgtgcaagtc cacagaaagc caggcccagc aacctgagtg ttgcatggat gtggtagact
      421 tcaatgctac ctgcctcggt acaggtctct gtggcccagg ttgctacagg cactggaatg
      481 cagatgggag cgctagctgt gtccggtgct ggaatgggac cctcccgaca tacaatggct
      541 ctgagtgtag aattctcact ggccggggcg tgcagcttcc catgaacagg agcacgggga
      601 cacctggaca gccacatttt gggggtcctc atgtggcagc ttctctcttc ctggggacac
      661 tcttcatcag cacaggcctc atcctctctg tggctggatt cttctacctc aagcgctcca
      721 gcaaacttcc tgaggttttc tacaggagag acagagcccc tgtcctgcag cctggtgaga
      781 cagctgccat ggtccccctg ccacagtctt cagtgaggaa gccaagatac atccggcgtg
      841 agcagcaccc agacaagaat agggaccctt ctgccttctc tacagtggag gcccacatca
      901 gcaacgtctg atctagaggt caactgagac ttcacagtac agcagtggag acccaaggcc
      961 ccctccagtg agctcactac acaaagggcc tgggccttaa gatatgccag aatggactcc
     1021 caatggcaga catgcacgaa tgctaggggg atgctaacgt ccatgccatg agatcgtcac
     1081 tgtgtggttt aacaggagca accatctgtg agactgagga ctcaagagca agtcatgtgg
     1141 ggtctgtgcc ccttaagagt aacagcatct atagcagcta taacacagac ctgatccaaa
     1201 cggtcaaaac ttctggagcc cacccactgg agcccatagt agacaggact ccattcccac
     1261 cgagctaaga agatgaaacc aaggttccaa cagtggagaa aacagcctgg atactggttc
     1321 cagagatagg ttgctctagt gtcagcctgc taatttagct gctgacctct caaggcccat
     1381 gtttctcaga gttgcagaat tgagtatcct tggttttctg attccagaag ccagcaagca
     1441 gagccttgtc ttccagggac agactccacc cagtaccttc aggctgggca ctcagagcaa
     1501 aatgtttacc cgtggggcct ccatctctga acacttaggt cacttgtccc cttgggcttg
     1561 tgagctcatg ctggttagca gtcctgtctt tgctctccta agactccaga agcctgtgag
     1621 ctgctagtgt ggctggtggt gttggccatg tgtccctata gaaggaggtg gcctgatgac
     1681 cagtgccatc ctccgtctag catcttcttt gacgtcaagc acacatctga tgttatgcac
     1741 agtgttagga gtttgctttc ccagagttga gccagtgact caggtagcag cagcaattcc
     1801 aagctggacc aattcaatta gactagatct tctctcctca agctttgttg tcccaaggtc
     1861 tcgtattcag tgtggtgtgt gggagcgaac taccccattg ccatgtccag gggacaagta
     1921 gggaggggaa gaagaagccc tcagccggac tcagagccta ctgttgtctg gtggaactgg
     1981 cagtgcagca caacccatcc cctcatcttt ccctggccat gtagcccctc ccatttcagg
     2041 acaccatctt gcatgaagag gtgaccccgc tccttaggac ttgaggtaga aagtgccagt
     2101 caagcacggc atggttttca gataagacta catgcatcac taggctttga gggggccact
     2161 ggcagtttat ggatctaatt gacccttggg gaaagcagaa ccctcgacct ggccacctga
     2221 gttcatttta gtggtccccc tcaaagccca tgtgtagacg tacagatgtg tgtctgctga
     2281 ctagaggcag aaccggataa agagagccaa atgagagctt agggattcta gaagtcctgc
     2341 caggtagttt gataagaatg cctacccagt gcccccaggc ttacatactt gaattgctga
     2401 gtcatcaggg attacgggag aggcttagga ggtgtggctt tattggagga agtgtgtctc
     2461 tggggatggg cattgggtct caaaagctca agccaggccc agtggctttc atttcctgct
     2521 gcctgtggat ttggatgtag agctctcagc tcctcgtcca gcaccatgtc cgcctatgct
     2581 accatgcttc ctgccgttcc gataatggac taaacctctg aaacagtaga caagccccaa
     2641 ttaaatactt tgttttataa
//
