LOCUS       NM_001162537            5644 bp    mRNA    linear   ROD 11-OCT-2023
DEFINITION  Mus musculus RIKEN cDNA 9330159F19 gene (9330159F19Rik), mRNA.
ACCESSION   NM_001162537
VERSION     NM_001162537.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5644)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5644)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ109378.1, BC138279.1 and AC153912.8.
            
            On Mar 21, 2012 this sequence version replaced NM_001162537.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC138279.1, SRR10223970.12288.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-495               CJ109378.1         2-496
            496-2884            BC138279.1         434-2822
            2885-5644           AC153912.8         158711-161470       c
FEATURES             Location/Qualifiers
     source          1..5644
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 16.55 cM"
     gene            1..5644
                     /gene="9330159F19Rik"
                     /note="RIKEN cDNA 9330159F19 gene"
                     /db_xref="GeneID:212448"
                     /db_xref="MGI:MGI:3036239"
     exon            1..224
                     /gene="9330159F19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            225..466
                     /gene="9330159F19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             290..2236
                     /gene="9330159F19Rik"
                     /codon_start=1
                     /product="uncharacterized protein KIAA0408 homolog"
                     /protein_id="NP_001156009.1"
                     /db_xref="CCDS:CCDS48527.1"
                     /db_xref="GeneID:212448"
                     /db_xref="MGI:MGI:3036239"
                     /translation="MSSSSPVADTHTIATDLHEQRGSTEANRHKEKMELLDQFDKERK
                     EWESQWKIMQKKIEELCQEVKLQRKMNMNEYSKVIDLCRDQDKMEFPPNHLNSAQCKL
                     RVLNYRDDPEKEKKTERNFLGEESQGSPKQNIHTETKVEFWNPLATDRKACETWAGEN
                     TSKESKDFSVALNTALEELAKVSEELCTFQEEIQKHSNHRRMKSDPVLQEMPKAIPVP
                     PQDHLISKGQGILPTNLEKEMQKKNLSCAYGLQSNSMNNCGIGTTGLQRGETPPTPPP
                     RSTSRNLPSSYSEQAQERLKEHLYHRWVAHEIQDKTDNNPHFLLRQSPLFPQEGKSLK
                     DSTMFSSWTPEVKIDRNLPGNKDTGLNLWSCDTILGTRESPSRPSQKTSFTSSGAKFE
                     KVFPDNPTKLHLDLHVKNDFLPSVTQRDPVRIYDCNCEPTPRNEKLAAKIDEFNRTVF
                     RTDRSCQAIQQSDIYTKSPDNLNSCDISTAQKAYLSEVDSGTSVLKASDNVSVPMENV
                     FSDPEKIYSADLVNQTQTRESPSSYQLMLHEHDWRSSNFSSRPRSADPRSNYGVVEKL
                     LKTYETETRSALQNSKGYRNNWTKCGSDESIAVKASNGKGFSRPARPANRRLPSRWAS
                     RSPSAPLALRRTAHRYKVSLQTEA"
     exon            467..811
                     /gene="9330159F19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            812..891
                     /gene="9330159F19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            892..2071
                     /gene="9330159F19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2072..5644
                     /gene="9330159F19Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atagtagccc agctgctgtt gtgacactga gcagagtagc tctttgaagt tcaatttgca
       61 aaggcgtttg tcaggaccac tgtggaagat gaatggattt tgttttataa aagaaccact
      121 gagactgttc tttaagacaa ctagctctct gccccacctc tgccattgct agactggcca
      181 cacagagcct gacctgctgc aggacgaccc ccaagtgtaa gaaggcaagt gagaccactt
      241 caaaccaaac agtttaacac ttccaagaac cagctaagag aaggcagaga tgagcagcag
      301 cagtcctgtg gctgacactc acacaattgc cacggacctc catgagcaga gggggagcac
      361 agaggccaac cggcataagg aaaagatgga gttactggac cagtttgaca aggaaagaaa
      421 agaatgggag agtcagtgga agatcatgca gaagaagatc gaagagcttt gccaggaagt
      481 aaagcttcag aggaagatga acatgaatga atattctaag gtcattgatc tttgccgtga
      541 tcaagataaa atggaatttc ccccaaatca cctcaactcg gcacaatgca aattaagagt
      601 gctgaattac cgagatgatc cagaaaagga aaagaaaaca gaaaggaatt tccttgggga
      661 agaaagtcaa gggtctccaa aacaaaacat acacacagaa accaaagtgg agttttggaa
      721 tcctttggcc acagacagga aggcatgtga gacctgggct ggtgagaaca cttctaagga
      781 gagcaaagat ttttctgtcg cccttaacac agctcttgaa gaacttgcaa aagttagtga
      841 agaattgtgc acctttcaag aggaaatcca aaagcattct aaccacagaa ggatgaaatc
      901 agatcctgtt ctccaggaaa tgccaaaggc aatccctgtg cctcctcagg accacttgat
      961 cagcaaaggt cagggcattc ttccaaccaa tttggagaaa gaaatgcaga aaaagaatct
     1021 gagctgtgcc tatggactcc aaagcaattc tatgaacaac tgtggaattg gtacaactgg
     1081 tttacaaaga ggcgaaactc cgccaactcc ccctccaaga agtacctctc gaaatctccc
     1141 cagctcatat tctgaacaag cccaagaaag actgaaggaa catttatacc acaggtgggt
     1201 ggcccatgag attcaagaca aaacagataa caatcctcat ttcctcttga ggcagtctcc
     1261 gttgtttcca caagaaggca agagtttgaa agatagtacc atgttttcct cttggacacc
     1321 agaagtcaaa atagatagaa atcttccagg taacaaagac actggactta atttgtggtc
     1381 atgtgacact atattaggta caagagagag cccttccagg ccgtctcaaa aaaccagttt
     1441 tacctccagt ggagcaaaat ttgaaaaggt atttccagat aaccctacga aattgcatct
     1501 tgatcttcat gtgaaaaatg actttcttcc ctcagtgaca cagagggacc cagttagaat
     1561 ttacgactgc aattgtgaac caactccaag gaatgaaaag ctggctgcaa agattgacga
     1621 gtttaacaga actgttttta gaacagacag aagttgtcaa gcaatacagc aaagtgacat
     1681 ctatacaaaa tcgcctgaca atctcaattc ctgtgatatc tccactgctc agaaagctta
     1741 cctatcagaa gttgacagtg ggaccagtgt tctgaaagct agtgacaatg tgtctgtgcc
     1801 catggaaaat gtgttcagtg atcccgaaaa aatatactcg gcagacctgg tcaatcaaac
     1861 gcagacacgt gagagcccca gcagctatca gcttatgctc catgagcatg attggagatc
     1921 aagcaatttt tctagccggc caagatcagc ggatcccaga tcaaattacg gtgttgtgga
     1981 aaagctgctg aaaacctatg agacagagac aaggtctgca ctgcaaaact caaaaggcta
     2041 caggaataac tggaccaaat gcggttctga tgagtccata gcagtgaaag cctccaatgg
     2101 aaaaggattt tcccgacctg ctagaccagc aaatcgtcgg ctcccatcca gatgggcatc
     2161 cagatcgcca tctgcacccc tagccttgcg gaggactgcc cacagatata aagtctctct
     2221 gcaaacagaa gcctagatgc tcgatatctc tagcctggat tgctggatta caaaagctct
     2281 tatacctttt gccaaactga atattgagaa tgtttacaaa cactcctgtt ctcttctgta
     2341 ttttctaaga ccactggaac aagtgatcca aaccccaact ttccatcatc agtcttcagt
     2401 gtttttaatc tacaggataa ttatatcctt ctactttaat ttcttgcatt agattttttt
     2461 tgtcggcatc ctcattgact ttgcaatatg atttaagttg acacagtgta ctatattgta
     2521 tattctaact ttccttgcaa atgcagaaaa caaggtcctg tgcatggcaa tgtgtttgta
     2581 ggtgcatgtg ttgtcatagg aagtattctg gtatgtattt aggtaaaaat gtatgtgcta
     2641 gtgttgactt tgaaattata acatgtagac ctatatattc tttgtgctta ttttaaagtt
     2701 ttgaaaatat acaatcctat ttatattttg catacctttt aataggtatt cacctaaggc
     2761 atttgatgtt catgtatcat ttaatgactt ctttgaccac caactatatt gaaaaataag
     2821 aattatacac aaacctaaca ttaacaattt tcctgaaatc aatctttttt tttttttttt
     2881 ttttttggtt tttccagaca gggtttctct gtgtagtcct ggctgtcctg gaactcactc
     2941 tgtagcccag accgtcctca aactcagaaa tctgcctgac tctacctccc aagtgctggg
     3001 attaaaggcg tgcaccacca cgcctggctc tttttgacct gaaatcaatc ttaaatagca
     3061 ttttaaccca tctgaaaata gctgatactt ttgatttttt tgtaaaatga aaatgttaca
     3121 ggtttaatat atcagccttc tagagcaatc ataagaagct cacacacact tttatatatc
     3181 atcttgtagt ctcatgtgac tttaactgta tacttgtttc tcggagccag tatcattaga
     3241 ctgccttaat aatgacagga ggaagtaata aatttatttt gtcattcgta gtaacaaaca
     3301 tcctttatac gagataaaga aaggcatcaa atcatgctga atttttcttt tttgttaaaa
     3361 ttgtcccgag ttttcagttg tctgctttat ctcaaattcc tctgtagagg taagttgctt
     3421 ggttggttgg ttggttggtt ggttggttgg ttggttggtt tgtttgtttg ttttcttcct
     3481 ttaatctaat catgtcccca aagttagtag ataaaaaact aattcgattt tttatgtaaa
     3541 acaagaatga acagaaacaa tttttttgtt gacagctcag ttatattgta attcttatac
     3601 tgtgtaaaaa ggtcttaaac taaattgggc attgataata acataagaaa cagagatata
     3661 catcaagggt ataatctgct ttcacctgat gcatgaaatc tgtactgaga agtggcctag
     3721 aagaagtaga agagttaagg tacttagaat tcttcatgga tggtcttaga aacaactttg
     3781 ctgtacatta ctcccatata agagcaatta ttttgaatgg tttgttaaat attaatccta
     3841 cttcacccag aaatgttgag aaattctctt tgccaaacaa aatcagtggg ctttctgctt
     3901 ttactatact agccactcga aggattccac cttattatac cattccctgg agtaaaggaa
     3961 ataattttta aatcacagat tgccttaaaa ggctcaagac tgtagcacag tgatggcaag
     4021 attcacggtt tacagtaaga agacgtctag ggcttaagtg gtattaggtg tctagaatgc
     4081 gagtttggca caactcacga aggttataga tccacttttc tcaatctttc atactttagg
     4141 gttgttccca cacacacaca cacaggaaag tagcctagat accagatacg agttagagta
     4201 tacttttcca ctagaacaga gaaaacactg gagaagtggt tccttggggc aagaaataat
     4261 aacctaaagc tattgctgtg gtcacatctg ttcctcggtg tccctgaatc ccaggcagtc
     4321 tgggaatgat ctgtagcccc tgtcttcaag ttcacatctg aatgttgagg tctcctttaa
     4381 aaatgggaaa tcctgatctc atcccaaaaa tgataaagaa agatttccag cagaggagac
     4441 ctgagattct tcaagtcttt aataaagcaa aacaatgtaa tatatttgat gaccacgctg
     4501 acttggaagc agaggcactg agtagaacct gagcgggtta ggacttgggg tagtgtcttt
     4561 gatcacttaa tcctttcctt tattatcaac aaacagttgc cttgccaggg gttcagccgc
     4621 ttaagctgcc ttttctgtta tcatctgaat agactaatgg ggccacttta ataccatata
     4681 ttaatgtgaa tcattagaat tgggaaaaaa ctagctttta gtctggctcc ttgactagaa
     4741 aactgaagaa actgaaacaa actgattagt ctatattctc tcttaaagta gtttataaat
     4801 tttatgggaa agcttaccag gaaagtggaa gttgtcactg aaaatatttt tttaattgtt
     4861 gtgattttta actggttctt tttctatgct gggtagccat tttcttcact gaaaccgtca
     4921 ttatgccatc attcttgagt ttaaggtctt ttaatcattt acaaagattt cattaggaat
     4981 gtctatttag aagacatttt tcctagcagc ttttgaaaaa aaaataaaat aaaggtctct
     5041 tttttttcac aggggattat tgaaattttt agctgatctc agaaccagag tactaaaata
     5101 tctctctctc tctctctctc tcctctctct ctttctctct ctctctctct ctctctcctc
     5161 tctctctctc tttctctctc tctctctctc tctctctctc tctctctctc tctctctttc
     5221 cctatctccc cctttctccc tccctccctt cctcccgcca tcctcctttt cgctctgtgt
     5281 ttgcactttt atgtgtatta taaatatttg ccttagaacc acaacacaaa tataaaaata
     5341 taagtgataa tttgtattat tcagcacttc aaacatgacc gtgtctttca cttgtcctta
     5401 ttgaaatgaa tagaaagatt cttatgctga cattccccaa aacatgattt atgtctacgt
     5461 aaatgactta gcaaagccac cacaaagtct taaaacaaag caaagcattg aattcccaaa
     5521 agagtattaa gttccattaa aaaaaaatct ttaaacttac atttttcaga tgaaaaataa
     5581 ttatttgata ttgaagtctt cagccattgg aagctattaa ataaaataag tttggaaaca
     5641 ctta
//
