LOCUS       NM_001408013            2855 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 6430550D23 gene (6430550D23Rik), transcript
            variant 4, mRNA.
ACCESSION   NM_001408013 XM_006499728
VERSION     NM_001408013.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL833786.8.
            
            On Jun 8, 2022 this sequence version replaced XM_006499728.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17253011.1596158.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-195               AL833786.8         58437-58631         c
            196-500             AL833786.8         54393-54697         c
            501-661             AL833786.8         54037-54197         c
            662-811             AL833786.8         53813-53962         c
            812-2855            AL833786.8         51155-53198         c
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 77.26 cM"
     gene            1..2855
                     /gene="6430550D23Rik"
                     /note="RIKEN cDNA 6430550D23 gene"
                     /db_xref="GeneID:320095"
                     /db_xref="MGI:MGI:2443361"
     exon            1..195
                     /gene="6430550D23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            196..500
                     /gene="6430550D23Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             246..830
                     /gene="6430550D23Rik"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 4; likely orthologue of H. sapiens chromosome 20
                     open reading frame 173 (C20orf173)"
                     /codon_start=1
                     /product="uncharacterized protein C20orf173 homolog
                     isoform 1 precursor"
                     /protein_id="NP_001394942.1"
                     /db_xref="GeneID:320095"
                     /db_xref="MGI:MGI:2443361"
                     /translation="MEHCWVFWGLVLWMIAPCLYLTHELAPQQGWTYMVPQQCNWFCF
                     KFGKRGCPSKSPNCSTCHHTAGEACYEKFMGYWRTKALWWLGMNSVSEHGTVWKKPSG
                     VTPNSLLHHFDFHCVSCAMLGNSGFSNINQLFYMAFRTNQASNHSSEAEMRSQTAGPF
                     ICPRNASHQGFWGQYWLLQLADLVPQVTRFWKMV"
     exon            501..661
                     /gene="6430550D23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            662..811
                     /gene="6430550D23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            812..2855
                     /gene="6430550D23Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagagggcg gtgcttgggt gcggagtgac agcacctgtg gtaagtgcct ctccttggac
       61 ctttggatct cttaggacag cgcttccaac ttgaccccgc cagagccacc gcagcgttaa
      121 ttagaattgg ttccaaaccg gggtgggcgc actctttaat cccagcactc agaagacaga
      181 gtcaagcgga tgtctgtgaa gaagccagtc tgttccctgc cacatgagcc actgcctggg
      241 cagacatgga gcactgctgg gtcttctggg ggcttgtctt gtggatgatt gctccctgcc
      301 tgtacctgac acatgaattg gcaccccagc agggatggac atacatggta ccacagcaat
      361 gtaactggtt ctgcttcaaa tttggaaagc gtggctgccc ttcaaaaagc cccaactgtt
      421 ccacctgcca ccacacagct ggggaagcat gttatgagaa gttcatggga tactggagga
      481 caaaagctct ctggtggctg ggcatgaact cagtgagcga gcatgggaca gtgtggaaga
      541 agccatctgg agtgactccc aattccctcc tgcaccattt tgatttccac tgtgtgtcct
      601 gtgccatgct ggggaattct ggcttcagca atatcaacca attattctac atggctttca
      661 ggacgaatca ggcctccaac cacagctccg aggcagagat gaggagccaa acagcaggac
      721 ccttcatctg tcccaggaat gccagtcacc agggtttctg ggggcagtac tggttattgc
      781 agcttgctga tctggtgccc caagtgacac gattttggaa gatggtctga ttccctagat
      841 gcgcaagata gtaaagatga ggtaagaagg ttgtggctct gatctgctct gagcaaggac
      901 tcaggcaact agctggataa ccagggtgag tggccagagt ctggtctgca tggtcagcac
      961 aaacccattc atatcctcag cacagaggcc agagttgtgt gtctatactc attcctcctt
     1021 gccttcctct gttctattct gcccttcatg tttacaaagc ttattttatt ttatgtgcat
     1081 gagtattttg cctgcatgta tgcatgtgca tcatgttcat gtctgctgcc ctcaggggtc
     1141 agaagagggg ctggattcct tgaatatgga gttacagatg gctctgagcc atcatgtggg
     1201 tatagaacca aacgcatgtt ctctgcaaga gcaacacaag ctcctaacca atgagcatct
     1261 ctctagccct tatgcagttc tccagcactt tagctctcta gccacctttt gtctcaactt
     1321 gcagccccca gcccccttat tttgagacaa aagtttctct gtgtaggcct ggctatcctg
     1381 gaactcactc tgtagatcag gctggctttg aattcgcaga gatcctcttt tgtgagatta
     1441 aaggcatgtg atagcatcat gtggctacct ttaacctttt tacaggccct tccccctgtc
     1501 tggaactccc ttcccccagc atgacaggca tcagctagtt gatgttcttt ttgaggtccg
     1561 gggtaagtct atgagagtgt ttatcacact gagttgagtc tatatttcct ggagaagtgg
     1621 aactccattt tcttccagct ctagagacag cctatcacta gctgatgaaa gagggaactt
     1681 gggataaagg acaggattca gcctgctgac atgaacatcc ttgctcatat gctaggccac
     1741 cctctctgga tttggatcag aacagcaaag aaagaagttc tatcactgac agaatgataa
     1801 tcagaccaaa ggcccccaga aggatctgtc cacatggact agagaagcag aaatggaagc
     1861 tgcttgtcag ctaagatggg cagacaaggc caccattcac aagtgacaac gagctgaatg
     1921 ctggattttt agtgtcacaa cagccacata attatgaaga tattcatggg taaagataaa
     1981 atggtgtgac atcagcctag ttctgaataa aatcttggtc tggtactccc tgcaaacata
     2041 gtatctgggg aggaagggtc agatctcagg gacaatctct ctctttcttc cagccctcct
     2101 tctacgtatt catttatcca tccatttatc tagttatcat ctatttaatt tgtttttctt
     2161 aggcagaaat ttacaatgta gctccaggct gcccttgact tcctgatgtt ctagtttcag
     2221 ccttctgagg actggcatta cattgccttg cccagtatta tatagcattt tcctgcaaga
     2281 cagaaacctt tcattttgga ggaaagctca ttaagaccta ggagattcta aaggaaggca
     2341 aaaattccat cctgcaggga agactcccaa gtaacaactc aaaagcttca ggaagttcca
     2401 gaaactgagc agattcacta gaccttcact ctattagtat acataaacta caaggcctgc
     2461 agagtcactc cctgacaaac ccagctgcct tacaggaagc agaaaccaac ttgactgcct
     2521 ggaaaagact ctccagtttg tgcagctgcc cacaagttgt gcagtgggct acaagtttgc
     2581 agcatttgtg tcaccctcgg tggagcaggc ctttgattat gtagctgtct ttgcatcatt
     2641 tctattcctc ctattaagta ccccaatcaa atgcatttgt tcactcccac tgaatagcat
     2701 gtttttgttt tttgtttttg attttttcct tttggttttt tgagacaggg tttctctgtg
     2761 taggcctggc tgtcctggaa ctcactctgt ctcccaagtg ctagaattaa aggcgtacgc
     2821 caccactgcc cggctgaata gcatggcaaa cctca
//
