LOCUS       NM_207657               2947 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 5031410I06 gene (5031410I06Rik), mRNA.
ACCESSION   NM_207657 XM_355581 XM_355582
VERSION     NM_207657.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   3  (bases 1 to 2947)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   4  (bases 1 to 2947)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   5  (bases 1 to 2947)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   6  (bases 1 to 2947)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   7  (bases 1 to 2947)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125090.3.
            
            On Mar 21, 2008 this sequence version replaced NM_207657.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077239.1, SRR5189685.120530.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               AC125090.3         46437-46598
            163-322             AC125090.3         47588-47747
            323-466             AC125090.3         49080-49223
            467-650             AC125090.3         49859-50042
            651-2947            AC125090.3         50787-53083
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 12.45 cM"
     gene            1..2947
                     /gene="5031410I06Rik"
                     /note="RIKEN cDNA 5031410I06 gene"
                     /db_xref="GeneID:381622"
                     /db_xref="MGI:MGI:3036277"
     exon            1..162
                     /gene="5031410I06Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..827
                     /gene="5031410I06Rik"
                     /codon_start=1
                     /product="uncharacterized protein LOC381622"
                     /protein_id="NP_997540.2"
                     /db_xref="CCDS:CCDS51443.1"
                     /db_xref="GeneID:381622"
                     /db_xref="MGI:MGI:3036277"
                     /translation="MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWR
                     MCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPY
                     HRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENL
                     IKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELG
                     LATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE"
     exon            163..322
                     /gene="5031410I06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            323..466
                     /gene="5031410I06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            467..650
                     /gene="5031410I06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            651..2947
                     /gene="5031410I06Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagaggct ggacattgca gtgatggcct tgtttgcccg actctgcaga ctttttcaga
       61 gagtcaatgt ggatgggaga gagaccagag aggggaggaa ggatgctgac cttccatctg
      121 agaggaatga aggacgaagg aggtggactt ggcgaatgtg catggctcac agacagacaa
      181 catccccggt acctgtcaaa agcaaaaagc agtttgagaa ggaagagaag gagctgatca
      241 aaaagatcca gctcactacc gaggagacaa atgagctgag agatcgcctg atctacgtga
      301 ccgagggatc catgaacaag aggccctacc acaggcaaac tcgacattat aaagaactga
      361 aattaaagga gaaggagatc atgacatttc tacacgactt agagatgaag aacatggagg
      421 cccgagagaa caatcaggag ctcaagaagg agaaaaattt ctatcgtaac ctgcacaccc
      481 ggatcctgct gggggagaat cttataaaga agaagttggc gatattgcag caggagagca
      541 aggaaataca tgctgattgg gccatcattc aacaacgttt ggtggagttg aacctgagtg
      601 gtaaagacga acaggagaag accagcaacc tggaagctca agaaaatcag gtctcagaag
      661 ctgcaagaga gctgggattg gccacagctg aagaagacag catcttgcag aatgagttgc
      721 catgccagga ggctcctgct gagcaccatc cccagcaccc atcatcttcc tcggatgaat
      781 cttcctcaga tgaatcttct tatagcacat gtcctgagtg ggaataggcc ctaacgagga
      841 agccatggct gattcagggc gttgttccct tttctcttca gacaacgact cttggtagaa
      901 aactgaggca gctgcactgc taccaagtgt ccaagaggag cagcagcctg gagggctgtg
      961 ctgctaaaag tgcaaaaaaa tgctgctgaa caataatttt cctttagagt tttggttgaa
     1021 tttttcattt ttgttctttg agttattgtt atgttattta gaagttatat gttcttgttc
     1081 ttgtatttca ttgtttgttt ttgcctttat ctctatatta attgaatttt aaaacctatt
     1141 tcttaaaaat tctatttctt atgcagaaaa attgatttgc aagtagtgac tcttgagacc
     1201 atcttcctta ttcaggtgtt ctatcccctg ctgtagacct agaactcaca tccagagatg
     1261 gatctttgta agttccaggc agccagggct gtataataaa gtcatagtct agccacctag
     1321 gggtatacaa ggtgatgatc ttttgtgtcg ataattttac ttaccccatg gacacacact
     1381 tgatgatgta atcactgcca tactgcatcc atggtgtcat gaattctatt actgctaaca
     1441 tatagcactc tataacacac attcattcat gatcccgtga accagatact gattaatata
     1501 cagccattgt tctagagcag ctgcggatat aaaaacactc agaaaggaat ataaaataaa
     1561 tcaggaaggc cagagccagc tgcctcagtt tacttgcaat agagcaacag tgattgagga
     1621 gaacaatggc ttccctttgg ttctggcctg aaagggtcag agccgttaac tgggagaaag
     1681 ttcaggggtt gttcctcctg aaagggaggg atgtctaaac atgactttct gtgagccaga
     1741 gtttttcctt gttcctcgtc aagagttaat atttaccctg agaggaagat gtccttaggt
     1801 cttcagataa cagtttcttc ttctgaaatt cattgttgtt atgagaaaat gactccaaaa
     1861 ttgataatat tgtttgccag atgcaactaa gtaaaaatgt tattttttga gcaaaatttg
     1921 caaagtcata ccccatgttt ttaagctgta gaaatcagta aagctttgct acttgccagc
     1981 agagcggtaa tctatctgtt tctttaaggc attctcgaag ctggtcgtca tcaaatgtta
     2041 accacatagc agatataatg accttccatg gcttgctggg aaatagcttt tgatagatgc
     2101 tgctgtcctt gaccataaac ttgctgtgtt tttgctgttg ctgattagac ttatgtttaa
     2161 catttatgtg aatgggtgtc tttcctactg aatgtaatac agtatgtggc tcctcctgag
     2221 ggacgtttcc ctcagaggac agaagaagga accacaacca ttcctggaga tggttgttag
     2281 gcaccatgtg ggtcttctag agagtagcag atgctctaac ctgtgaggca tccccacacc
     2341 tcctgaagtt gacttttgtc cttccagaga atgtgctgtt tagatggcca ggatcaagcc
     2401 cagttgagtg gagaaatctc aggagatgtg taggtacagt gcctgacctg ctcatactca
     2461 ttgtcctatg ctgccaggca tgtatgaagg gctctgatgt taccactggc agttctgtgt
     2521 tcagagcctt ttatttggac aaaatgcggt agagggaaag ttgtggattg aagtttgtgt
     2581 gttctgctcc ctcaagagtc cctaaacaca ggtgcagtca ggtgaaatct tatttggtca
     2641 gataaggcta gaggctctta ttggacaatt gggaagaaat gcagagctga aatattagag
     2701 agtggaagtg tgatggagaa gagagaggga acggaggaca aagatagagg aatgggaaga
     2761 tggtgctaga ctacgggaca ctagtgtcca aaaataactg gggatttcat aaatgggaaa
     2821 tagagtaatg taggtacatt ttcctgatct aagtgtgcag gttttattta tatgtgttga
     2881 gttttgtatt gcttgcatgg acattttgtg cttgtagatt tcccctaata aatttggctg
     2941 gcatatt
//
