LOCUS       NM_028890               2585 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 4931414P19 gene (4931414P19Rik), mRNA.
ACCESSION   NM_028890
VERSION     NM_028890.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Mestres,I. and Calegari,F.
  TITLE     4931414P19Rik, a microglia chemoattractant secreted by neural
            progenitors, modulates neuronal migration during corticogenesis
  JOURNAL   Development 150 (9) (2023)
   PUBMED   37070770
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Yu,Y., Liu,C., Zhang,J., Zhang,M., Wen,W., Ruan,X., Li,D.,
            Zhang,S., Gao,M. and Chen,L.
  TITLE     Rtfc (4931414P19Rik) Regulates in vitro Thyroid Differentiation and
            in vivo Thyroid Function
  JOURNAL   Sci Rep 7, 43396 (2017)
   PUBMED   28230092
  REMARK    GeneRIF: Rtfc (4931414P19Rik) regulates in vitro thyroid
            differentiation and in vivo thyroid function.
            Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CT009512.6.
            
            On Nov 17, 2006 this sequence version replaced NM_028890.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC029624.1, SRR7652917.808712.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               CT009512.6         175700-175805
            107-944             CT009512.6         185657-186494
            945-1262            CT009512.6         190169-190486
            1263-1324           CT009512.6         195611-195672
            1325-1428           CT009512.6         195853-195956
            1429-1541           CT009512.6         196517-196629
            1542-2585           CT009512.6         196902-197945
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 27.85 cM"
     gene            1..2585
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /note="RIKEN cDNA 4931414P19 gene"
                     /db_xref="GeneID:74359"
                     /db_xref="MGI:MGI:1921609"
     exon            1..106
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     exon            107..944
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     CDS             342..1967
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /note="uncharacterized protein C14orf93 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C14orf93 homolog
                     precursor"
                     /protein_id="NP_083166.1"
                     /db_xref="CCDS:CCDS27094.1"
                     /db_xref="GeneID:74359"
                     /db_xref="MGI:MGI:1921609"
                     /translation="MSFSATILFSPPSGSEARCCCCACKSETSQGSTGSQGGNPPAST
                     PITVTGHGLAVQSSEQLLHIIYQRVDKAVGLAEAALGLARANNELLKQLQEEVGELRQ
                     GKVCTADEDRESRARTPPPEEPGVLKGSPGEASNSLPAMEEECDSVGSGVQVVIEELR
                     QLGAASTVGQGPLGFFAAPQRDARLPGCTLAAVEGAPLLNPMADDYVASEGSIQRVLV
                     PAYAKQLSPATQLAIQRASSETGPESGTKLPATRPEGVLGSAALDSALDESGAGGAGE
                     LSRSLGFVGSPCRIRGTGQKNSRRKRDLVLSKLVHNVHNHITNDKRFNGSESIKSSWN
                     ISVVKFLLEKLKQELMVSPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEK
                     KLRSRRYRLFANRSSIMRHFGPEDQHLWKDVTEELMSDEEDSLNEPGVWVARSPRFRA
                     QRLTELCYHLDANSKHGTKANRVYGPPSDRLPSVEAQLLPPELYNPNFQEDEGGGNEK
                     GPVSPSYDQPHKTSCPDLNSFIEIKVEKDEYTL"
     exon            945..1262
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     exon            1263..1324
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..1428
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     exon            1429..1541
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     exon            1542..2585
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2568..2573
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /note="hexamer: ATTAAA"
     polyA_site      2585
                     /gene="4931414P19Rik"
                     /gene_synonym="Rtfc"
                     /note="major polyA site"
ORIGIN      
        1 caaagagcca tacgaccttc gagtatcctt tttccatttt ttttcctcct tcatcttgtg
       61 tgcgttttcc aaatttttaa aaatagagat ctgtggcagt gctgggtgaa ggccgtggga
      121 caccattgtg ctgcgtactt agggagtaca ggacctgcta atggaaagct gaggagaagc
      181 aaccatggac ctgctaggct actcctccac agaacccaca gcccggagcc ccatctcttc
      241 tgaccaccgt ctatgaagcg catccctggc gaaggccagt tacttggagc acttgtgaag
      301 cgacctatta gagtgtgcac agttacctgc gtctatcaac tatgtccttt agtgccacca
      361 ttcttttctc ccctcccagt ggcagtgaag ccagatgctg ctgctgtgcc tgtaagagcg
      421 agactagcca gggcagcacg ggttctcagg gcgggaatcc tcccgccagt acccccatca
      481 cagtgactgg acatggcctg gcggtccaaa gctctgaaca gctcctgcac attatctacc
      541 agcgggtgga caaggcagtg ggtctggctg aggccgccct ggggcttgcg cgggccaaca
      601 atgagttgtt aaaacagctc caggaagaag tgggtgagct acggcagggg aaagtgtgca
      661 ccgctgatga agatagggag agccgggccc gcaccccacc acccgaagag cctggagtgc
      721 tcaagggaag tccaggagaa gccagcaact ctctgcctgc catggaggag gagtgtgata
      781 gcgtgggcag tggcgtgcag gtggtgatcg aggagctgcg gcaactgggg gctgcctcca
      841 ccgttgggca ggggcccttg ggcttcttcg cagcccccca gagagatgcg cgccttccag
      901 ggtgcactct ggctgcggta gagggagctc cgctgctcaa cccgatggca gacgactatg
      961 tggcctctga gggttcaata caacgagtgc tggtccccgc ttatgccaaa cagctttcgc
     1021 cagccacaca attggctatc cagagggcat cctcagagac aggcccagaa agtggaacca
     1081 agctgcccgc aacgcgccct gagggtgtgc tcggctctgc agctctggac agtgccttgg
     1141 acgagtcagg cgctggaggc gctggggaat tgagccgctc tcttggattt gttggctccc
     1201 catgcaggat ccgagggact ggccagaaaa actccaggcg gaagcgagat ctggtgctct
     1261 ccaaactggt ccacaatgtg cataaccaca tcaccaatga caagagattc aatgggtcag
     1321 aaagcattaa gtcgtcttgg aatatttcag tagtgaagtt ccttctggaa aagctcaagc
     1381 aggagctgat ggtgagcccc cacaattaca cagacaagga gctgaaggga gcctgtgtgg
     1441 cctacttcct taccaagagg cgagagtacc gcaattctct caaccctttc aaaggcctaa
     1501 aggagaaaga ggagaagaaa cttcgaagtc gccgataccg gcttttcgcc aatcgatcca
     1561 gtatcatgag gcacttcgga cccgaggacc agcacctgtg gaaggacgtg acagaagagc
     1621 tgatgtccga cgaggaggac agtcttaatg agccaggtgt gtgggtggcc cgctcgcccc
     1681 gattcagggc ccagcgcctc acagagctct gctaccacct ggatgctaac tctaagcacg
     1741 gcaccaaagc caaccgcgtc tacgggcctc cctcagacag actgccttct gtggaggccc
     1801 aactccttcc tcccgagctg tacaacccca atttccaaga agacgaagga gggggcaatg
     1861 agaaaggacc tgtctcccca tcttatgacc agccccacaa gacatcctgt cctgacttga
     1921 actcgtttat tgaaatcaag gtggaaaagg atgaatacac tctataacaa ggctaactgg
     1981 ctcctcccac tctccacatc ctggaaagga tggctcggat tggtaaaaga aaatctgctt
     2041 ttcttaacat agtttccact tgaagtggaa tagcagaact tatgtagaag gcaggggagg
     2101 tctttctccc tgtgaatggc agcccagaaa atgtttatcc ctaagtataa acagtgcctc
     2161 agaggagcct gggatgcaaa ggaggatggg ccaaagaaac atgaggcctt gatccatgtc
     2221 gtgaggcctt gatccatgtc gtgaggcctt gatccatgtc ccctctctga tttggtttgc
     2281 cccccactct cccaccccac cccaccccac tgtaccccac agctcaggag aaacattgct
     2341 ggtcttgtgc tgccccggag gctgaagaga gcagtccagg gtcatactgc cccctggtgg
     2401 gaagtttcag tcatgggctt tctagtctga gcagggaatt atgggcttac cgctatttgg
     2461 aattaggatg tagatatgat agttattgtt tggatttttt aaatgatagt tattgtttgt
     2521 tggattatat gagaaaagtt tattatttcc atattacacg tgaggaaatt aaagcttaaa
     2581 cattt
//
