LOCUS       NM_198668               3395 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 4930590J08 gene (4930590J08Rik), mRNA.
ACCESSION   NM_198668 XM_355800
VERSION     NM_198668.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Chen,R., Ma,T., Du,S., Luo,J., Zhang,H., Xu,X., Cao,Z., Yuan,Z.,
            Sun,H., Liu,M., Xiong,B., Shi,Q. and Liu,J.Y.
  TITLE     Impaired fertility in 4930590J08Rik mutant male mice is associated
            with defective sperm energy metabolism
  JOURNAL   FASEB J 36 (12), e22634 (2022)
   PUBMED   36331537
  REMARK    GeneRIF: Impaired fertility in 4930590J08Rik mutant male mice is
            associated with defective sperm energy metabolism.
REFERENCE   3  (bases 1 to 3395)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK029822.1 and AC168852.2.
            
            On Dec 11, 2007 this sequence version replaced NM_198668.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK029822.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-194               AK029822.1         1-194
            195-195             AC168852.2         116033-116033
            196-3395            AK029822.1         196-3395
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 40.94 cM"
     gene            1..3395
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /note="RIKEN cDNA 4930590J08 gene"
                     /db_xref="GeneID:381798"
                     /db_xref="MGI:MGI:2685917"
     exon            1..124
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            125..261
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            262..317
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            318..986
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     CDS             509..3310
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /codon_start=1
                     /product="uncharacterized protein C3orf20 homolog"
                     /protein_id="NP_941070.1"
                     /db_xref="CCDS:CCDS51853.1"
                     /db_xref="GeneID:381798"
                     /db_xref="MGI:MGI:2685917"
                     /translation="MNQIKSNRELYLQYSASAPKLLAHVSKLLIFCRNSGISIPKGIR
                     NIFEFTWEELINDPAVPTASEIQDLVVTFGTPTVVLAEVIPVQVLPMQKKQPPPAPPP
                     TLMPAATSGGKYVPPTSTSAKLMPNGQNTLHKFQRQSIHLLTELLSLKMKAMVESASA
                     GANPLDITKRFVEASQLLHLNAKEMAFDCLTGTVGKSCLSTAQLGKESSMNISAMGVN
                     TPYQLVYQTSTACLSFSLCTGKESRKKDIGAKPKPVDDVSPQPVRARTPPENTVVELP
                     DPCPEAREKLQDMCRHIEAERILWRGRNASCPMIFRNYRSRISSHLMLASKGDSHHPL
                     TTGTQITASAPHQPSSQHAQMGRHSQEWKGPKKPIKLHYTFYDGSSFIYYPSGNIALL
                     QIPTCCRGKPITCLFNDMPNTFLALFNAEGLGCVYYNLKNCCPYVLVLDEEGGITNDQ
                     KGYIVHRWSWASKTETLLSLEYKVNEQMKLTVLGQDSITVTFTSMNETVTISVSPKSC
                     PHNVLHDKRPVRRISLMDEKVSKTNRALAEIKKRFQKTVTQFMNSVLLAAGLFTLEYP
                     NPKETETSRVKLKPGSNQDRIRKTSLYQGENHMRIQSARQDSIINETLKEDSILTSLA
                     HVQKKNGKVQVKVLPRGKRREVRSPTRWAASPSDCPLVLRRLILKEDIRAGCKCIVKA
                     PLVSDLELERFLSAPRDPNQVLVFGIMSSQDPTLTAQLQWLMDTLYSHLQQGRSSPCI
                     QCRHDPYRLLRYDLDSPLQKDPPLMVKKFAVIHGMVLMFAGGKLLFGGCVLNGYGFSK
                     QNLLKQIFRAQQDCKMGYFLPDNYKFKHDAFKASRIAKPCGLSSRGVPSQFLGLETEP
                     SMSTYVTNLDDTESTKKPPSDDYEGSVSSVALVDKIEKEPPPSPEKVKPPEIELQPFT
                     KMRRSSKKTAGFKKLNSKK"
     exon            987..1127
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1128..1244
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1245..1253
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1386
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1387..1656
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1657..1806
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1807..1927
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            1928..2059
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            2060..2183
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            2184..2427
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            2428..2731
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            2732..2839
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            2840..2982
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            2983..3078
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            3079..3213
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     exon            3214..3395
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3379..3384
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /note="putative"
     polyA_site      3395
                     /gene="4930590J08Rik"
                     /gene_synonym="Gm1071"
                     /note="putative"
ORIGIN      
        1 ggtctttaca gttaacacaa caggatagcc acaccatatg tggctcaagt ttccttttga
       61 accagtaagg caagctgagt cagttatatg ccagactgtt cacataaaat gctacatagc
      121 caaggagtgt ttctgaccca agccagagag aaccagaaac tagggaagca tggccagatg
      181 acctgggaag cctgctttcc ttttggtttt gagtactcgg cacttttacc caactttgtt
      241 cgtggctcag taccactaca ggcttttgtc agtaggccgc aggcagatct tccaccctca
      301 ggtcactaac tacaaagaaa ctgatggctc agtgaccttt gagggtgatt tctgcatgtg
      361 cactccatct ttccctgagg cttctctgta ggtaagagct tctgacccac ttgtgaagac
      421 acttgccaga gtgctgagtc tttacagctg agtgtccctc tccctcgaga tggacagtgt
      481 cacctagcag tatgcctacc cagacaacat gaaccagatc aaaagtaacc gagaactgta
      541 cctgcaatac tcagcctcag cccccaaact gctggcgcac gtctccaaac tcctcatttt
      601 ttgccgcaac tcgggcattt ccatcccaaa gggcattagg aatatttttg agttcacctg
      661 ggaggagctc atcaacgacc ctgcagtgcc cactgcctcc gagattcagg atctggtggt
      721 cacttttgga actcctacag tggtgcttgc agaagtgatc ccagtacagg tcctccccat
      781 gcagaagaag caacccccac ctgccccacc acctacacta atgcccgcag ccaccagtgg
      841 gggcaagtac gtccccccca cctccacctc tgctaagctg atgcccaatg gccaaaacac
      901 cctgcacaag ttccagcgac aatccatcca cctgttgaca gaactgcttt ccctgaagat
      961 gaaggccatg gtggagtctg cctctgcagg tgccaatcct ttggacatca ccaagcgctt
     1021 tgtggaggcc agccaactcc tccatctcaa cgcaaaggag atggcctttg actgcctgac
     1081 tggcactgtt gggaaaagct gtttaagtac agcacagctg gggaaagaat cctccatgaa
     1141 catttctgct atgggagtga acacacctta ccagctggtc taccagactt ctacagcctg
     1201 cctgagcttc tccctctgca cgggaaagga aagcaggaag aaagatattg gagcaaagcc
     1261 aaagcccgtg gatgatgtct cgcctcagcc cgtccgagcc cggacccctc ctgaaaacac
     1321 tgttgttgag ttgcctgacc cctgccccga ggcccgggaa aagctgcagg atatgtgtcg
     1381 ccatatagag gccgaaagga tcttatggag agggaggaat gcctcctgcc ccatgatttt
     1441 tcgaaactac aggtcaagga tatcctctca tttaatgttg gcctccaagg gggactctca
     1501 ccatcctctc actacgggga ctcagattac tgcttccgca cctcaccagc cttccagcca
     1561 gcatgctcaa atgggccgcc attctcaaga gtggaagggg cccaagaagc ccatcaagct
     1621 gcattacacg ttctatgatg gttcctcctt catttactat ccctcgggaa atattgcctt
     1681 acttcagatt cccacgtgct gcagagggaa acccatcacc tgcctcttta atgacatgcc
     1741 caataccttc ctggctctgt tcaatgctga aggcctgggc tgtgtttact acaacctgaa
     1801 gaactgctgt ccatatgtct tggttttgga tgaagaaggt gggatcacaa atgaccaaaa
     1861 gggctacata gtccacagat ggagctgggc cagcaagaca gagacattgc tctctctgga
     1921 atacaaggtg aatgaacaaa tgaagctcac agtcttgggg caggactcca tcaccgtcac
     1981 cttcacctcc atgaatgaga cggtaacaat cagtgtgtca cccaaaagct gtccccataa
     2041 cgtgctgcat gacaaacggc cagttcgcag gatcagcctc atggatgaaa aggtgtcaaa
     2101 gacaaacaga gccctggctg agatcaagaa gcggtttcag aagactgtga ctcagtttat
     2161 gaactctgtg ttgctggcag caggtctgtt caccttagaa tatcccaacc caaaagaaac
     2221 agaaactagt cgggtcaagt tgaaacccgg gtctaatcag gatcggatcc gtaagacaag
     2281 tttataccaa ggagaaaacc atatgcgaat ccagtcagcc cgacaggact ccataattaa
     2341 cgagacactg aaggaggatt ctatactcac atccttggcc catgttcaaa agaagaacgg
     2401 caaagtccag gtcaaagtct taccaagagg gaagcgcaga gaggtgcgca gccccaccag
     2461 atgggcagcc tcaccctctg actgcccact ggtgctgcgg aggctcattc tcaaggaaga
     2521 catccgggct ggctgcaaat gtattgtgaa ggcacccctg gtgtccgact tggagctgga
     2581 gcgtttcctg tctgcacccc gggaccccaa ccaagtgctg gtatttggaa taatgtctag
     2641 ccaggatccc acgctcaccg cacagctgca gtggctgatg gatacactgt atagccatct
     2701 gcagcagggc cggtcttcac cctgcatcca gtgccggcat gacccttacc gcctgctgcg
     2761 gtatgacctg gacagcccgc tgcagaagga tcctccccta atggtgaaga agtttgcggt
     2821 gatacacggg atggttttga tgtttgctgg gggcaagctc ctatttgggg gctgtgtgct
     2881 aaatggctac ggcttcagca agcagaatct gctgaaacag atcttccggg ctcaacagga
     2941 ttgcaagatg ggctacttcc tgccagacaa ctacaaattc aagcatgacg cttttaaagc
     3001 atccagaata gccaaaccgt gtggcttaag cagcagaggt gtgccatctc agttcttggg
     3061 actggagact gaacccagca tgtcaaccta tgtcacaaac ctggatgata ctgagtcaac
     3121 taaaaaaccc ccatctgatg attatgaagg aagtgtctct tcagtggcgc ttgtggacaa
     3181 aatagaaaaa gaaccacctc cctcccctga gaaggtcaaa ccgcctgaaa tagaactgca
     3241 gcctttcacc aaaatgagga ggagcagtaa gaagaccgct ggctttaaga agttaaactc
     3301 taagaagtga cattgggtaa ccagcgatgc cttccccaca cccagcccca cctcctggtc
     3361 tcccaccccc ccccctttaa taaatgcatg tgcct
//
