LOCUS       NM_026262               2017 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus RIKEN cDNA 4930524B15 gene (4930524B15Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_026262
VERSION     NM_026262.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   He,Y., Chen,Q., Dai,J., Cui,Y., Zhang,C., Wen,X., Li,J., Xiao,Y.,
            Peng,X., Liu,M., Shen,B., Sha,J., Hu,Z., Li,J. and Shu,W.
  TITLE     Single-cell RNA-Seq reveals a highly coordinated transcriptional
            program in mouse germ cells during primordial follicle formation
  JOURNAL   Aging Cell 20 (7), e13424 (2021)
   PUBMED   34174788
REFERENCE   3  (bases 1 to 2017)
  AUTHORS   Khan,R., Ye,J., Yousaf,A., Shah,W., Aftab,A., Shah,B., Zaman,Q.,
            Zubair,M., Shi,Q. and Jiang,X.
  TITLE     Evolutionarily conserved and testis-specific gene, 4930524B15Rik,
            is not essential for mouse spermatogenesis and fertility
  JOURNAL   Mol Biol Rep 47 (7), 5207-5213 (2020)
   PUBMED   32592116
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL662793.10 and AL669946.9.
            
            On Mar 10, 2023 this sequence version replaced NM_026262.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015879.1, AK015006.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-375               AL662793.10        214483-214857
            376-461             AL669946.9         9310-9395
            462-560             AL669946.9         10791-10889
            561-605             AL669946.9         12540-12584
            606-2017            AL669946.9         13996-15407
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 18.71 cM"
     gene            1..2017
                     /gene="4930524B15Rik"
                     /note="RIKEN cDNA 4930524B15 gene"
                     /db_xref="GeneID:67592"
                     /db_xref="MGI:MGI:1914842"
     exon            1..375
                     /gene="4930524B15Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             84..581
                     /gene="4930524B15Rik"
                     /codon_start=1
                     /product="uncharacterized protein C5orf47 homolog"
                     /protein_id="NP_080538.1"
                     /db_xref="CCDS:CCDS24515.1"
                     /db_xref="GeneID:67592"
                     /db_xref="MGI:MGI:1914842"
                     /translation="MVPSRSGQRPDGPRLIYVTRFASHRHGVWQLRGLRGFGHRGPGL
                     GARCASKQAAVEPGARGGERPTGSQAGVTDTPDSAPFQRRSRAPRAREQAAQAGLNQK
                     NAAKEFDFPIPLNEASKLMKERKKASVWSKVQQVISRMIAENESYRRRLQCQRVSSEI
                     RVAAR"
     exon            376..461
                     /gene="4930524B15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            462..560
                     /gene="4930524B15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            561..605
                     /gene="4930524B15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            606..2017
                     /gene="4930524B15Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1112..1117
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4930524B15Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1146
                     /gene="4930524B15Rik"
                     /note="major polyA site"
     regulatory      1426..1431
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4930524B15Rik"
                     /note="hexamer: AATATA"
     regulatory      1452..1457
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4930524B15Rik"
                     /note="hexamer: AATACA"
     polyA_site      1453
                     /gene="4930524B15Rik"
                     /note="major polyA site"
     polyA_site      1477
                     /gene="4930524B15Rik"
     regulatory      1880..1885
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4930524B15Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1916
                     /gene="4930524B15Rik"
ORIGIN      
        1 acacacctca cacacacaca ccccacgccc tgtgctcagg ccggctccga ggtcccgcag
       61 gttgcccgac aggaggccga gagatggtgc ccagccgcag tgggcaaagg ccagatgggc
      121 ctcgcttaat ctacgtgacc cgcttcgcct cgcaccgcca tggcgtgtgg cagctgaggg
      181 gtctccgagg tttcggccat cgaggcccag ggctcggggc ccgctgtgcc tcaaagcaag
      241 cagcggtgga gcccggggcc cggggaggag agcggcccac tggctcccag gccggggtca
      301 ctgacacccc ggattccgcc cctttccagc ggaggtcgag agcgcccagg gcccgggagc
      361 aagcagcgca agcaggttta aaccagaaaa atgcagctaa agagtttgat tttcccattc
      421 cactgaatga agcctccaag ctaatgaagg agaggaaaaa ggcctctgtg tggagcaaag
      481 tacagcaagt catttccaga atgattgcag agaacgagag ttacagacgc agactgcagt
      541 gccagcgtgt atctagtgaa attcgagttg ctgcaagata aatgtgaatc ttcctgcctt
      601 ctctgcttga ggaagagttg gtgacagaga taggggagcc tgacaccttc ctgggtctcg
      661 atcaagaagc tgtttttctg tagacttctg ggacatgctt tgcttcagtc cacaccatgt
      721 tcacacagga agagacaact ctcaccaact ccccaactgc tgatgtctca actggacaag
      781 aacctgatgc acagcatcat tgagaagtcc tcacagagct gttagaaaat gcaaatatgc
      841 aaagttctca tgaaggtggt aatgtctgta caatttgtgg gtttttttct ttccaagcta
      901 caacttcatc ccttcatgag attcaacaac tttggttttg tgattgtatg ttctttaaat
      961 gactagtaaa ttcacctgtt tcctgttgat ggacacatgt cacctaggca aaaggcctag
     1021 gccttgcata tgagatccac agtttctccc cacaggctta tccaacatct ttggacaacg
     1081 ctaagtcaag tttcacattg ctatatccct caataaagtt tcaaatgtta gtttatacaa
     1141 gttaaatcta ctaccaaatg gaagatgttt ataaacctaa ctgcataaaa gtttgtggag
     1201 agtgtagaca aagattttta gctatgttta ggtttgtgtg agctgctgac tctatggaaa
     1261 caaagcctgt tttatcagct ctgttagtat gtatgcattt cactgtcacg tgagtgtcac
     1321 gctggagaca aagtgtccta ctgttctaga accatgcagc tctaaagact tccatggaaa
     1381 tgaatgttct aaatgtttta tttattgttt aataatttct agtgaaatat atctgttttg
     1441 ttgaacagaa aaatacaatg tgaatttcct cctcagatat tgaacagcag atgtgatgcc
     1501 atgatttatc caccgtttca gattcctatc aggacctgat acactcttca tgagaacctg
     1561 agacggtttc aagtcagagg catatctatt ggagctgtgg acatttcaca tttccttctt
     1621 ctcttcatct catcctcttc agtctttcca ctggtctgtg ccagaggaat ttgcccagta
     1681 attctattag tcctgatttg tctttttctt tgcttaaatc agttttattt tagcccaata
     1741 gtctgttctt gtggcagtgc attctgagaa atgtaccaca gatgattctg acatcttatg
     1801 agtatcatag agtacgctca cacaaagcta agtggcctga gtcatcactg agcatggctc
     1861 caactgcagc aagggtgaca ataaacacaa ggcatgagag cctgctgcct ctgtaatggg
     1921 gcattctgct ttaaactaaa agcttttcta tacataaagg taatgtacat tagtgatgaa
     1981 aacagtatgt tgactagata aagcagtaat gtgttat
//
