LOCUS       NM_001100394             944 bp    mRNA    linear   ROD 16-FEB-2025
DEFINITION  Mus musculus ciliary microtubule inner protein 6 (Cimip6), mRNA.
ACCESSION   NM_001100394 XR_001571 XR_035188
VERSION     NM_001100394.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 944)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. doi:
            10.1038/nature24643.. PMID: 29144450]
REFERENCE   3  (bases 1 to 944)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015698.1 and BC049719.1.
            
            On or before Aug 3, 2007 this sequence version replaced
            XR_035188.1, XR_001571.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049719.1, BU946387.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                AK015698.1         2-22
            22-684              BC049719.1         1-663
            685-944             BC049719.1         665-924
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 17.93 cM"
     gene            1..944
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /note="ciliary microtubule inner protein 6"
                     /db_xref="GeneID:75087"
                     /db_xref="MGI:MGI:1922337"
     exon            1..88
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             66..767
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /note="uncharacterized protein C2orf73 homolog"
                     /codon_start=1
                     /product="ciliary microtubule inner protein 6"
                     /protein_id="NP_001093864.1"
                     /db_xref="CCDS:CCDS48764.1"
                     /db_xref="GeneID:75087"
                     /db_xref="MGI:MGI:1922337"
                     /translation="MEGEEKQQQHKTEDDGIACVAERKVEIKNEKSPGKSTQHPKPCV
                     DRRRVNYAKFIHTNARTYNEPVPYIDNKGPEKQRKWWFHNEAPKHVSQPSYDTKSVQR
                     SDFQKPACPLVLPVKHSRMQKPSCGIVPLTSLDVSGEHENNFVEYISFIHQYDARRTP
                     NEPIKGKKHGTFVQREIKLGAMPIVPKAPEVLLNTLESGSSEQPQKTDKGNSSGDKVT
                     SPGLCQQNSQELLET"
     exon            89..296
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            297..450
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            451..566
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            567..925
                     /gene="Cimip6"
                     /gene_synonym="4930505A04Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcaagaata ggtcagtgtt ctctcttgac actcctagct gccacgtggc aggctggagg
       61 gggccatgga gggagaggag aagcagcaac agcataaaac agaagatgat ggtatagcgt
      121 gtgtagctga aagaaaagta gaaatcaaaa atgaaaaaag tcctgggaaa agcacacaac
      181 acccaaaacc atgtgtggac agaagacgtg taaattatgc taaattcata cacacaaatg
      241 caagaacata caacgagcca gttccctaca ttgataataa agggccagaa aagcagagaa
      301 aatggtggtt ccataatgaa gcaccaaaac atgtctccca accatcttat gacaccaaaa
      361 gtgtccagcg gagtgacttc cagaagccag catgcccatt ggttttgcca gtcaaacaca
      421 gccggatgca aaagccttct tgtggaatag ttccacttac cagtctggat gtatcaggag
      481 aacatgagaa caattttgta gaatacatct cttttataca tcaatatgat gccaggagaa
      541 ctcccaatga acccatcaaa ggaaagaaac atggaacctt cgtgcagaga gagataaaac
      601 taggggctat gccaatagtt cctaaggcac cggaggtatt attgaacact ctagagtcag
      661 gttcatcaga acagccccaa aaaacagaca aaggaaattc atcaggagac aaagtgacct
      721 caccaggcct atgccaacag aattcccaag agttgctgga gacttagaac agcttatcag
      781 cacgagaagg cagcccagcc cagcagaccc agaagcctgg gtctgggaga tgactggaag
      841 agtgttgctc tcaactggag ggcaagctct tctcaccagg cacgggcctt taaaccacta
      901 ataaaaaagt cagggtaagt gaggaaaaaa aaaaaaaaaa aaaa
//
