LOCUS       NM_027612               2448 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 4921539E11 gene (4921539E11Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_027612 XM_001473197 XM_131605 XM_896041 XM_915378 XM_923706
            XM_993273
VERSION     NM_027612.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Oyama,Y., Miyata,H., Shimada,K., Fujihara,Y., Tokuhiro,K.,
            Garcia,T.X., Matzuk,M.M. and Ikawa,M.
  TITLE     CRISPR/Cas9-mediated genome editing reveals 12 testis-enriched
            genes dispensable for male fertility in mice
  JOURNAL   Asian J Androl 24 (3), 266-272 (2022)
   PUBMED   34290169
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB615869.1, AK015018.1 and BX631077.1.
            
            On or before Jul 24, 2009 this sequence version replaced
            XM_915378.2, XM_923706.2, XM_993273.1, XM_131605.5, XM_896041.2,
            XM_001473197.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015018.1, BC107405.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                BB615869.1         2-18
            18-2368             AK015018.1         13-2363
            2369-2448           BX631077.1         2-81                c
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 47.5 cM"
     gene            1..2448
                     /gene="4921539E11Rik"
                     /note="RIKEN cDNA 4921539E11 gene"
                     /db_xref="GeneID:70941"
                     /db_xref="MGI:MGI:1918191"
     exon            1..565
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            566..657
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             583..1923
                     /gene="4921539E11Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     uncharacterized protein C1orf141 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C1orf141 homolog isoform
                     1"
                     /protein_id="NP_081888.1"
                     /db_xref="CCDS:CCDS51248.1"
                     /db_xref="GeneID:70941"
                     /db_xref="MGI:MGI:1918191"
                     /translation="MTEKILEKFDALEEKERILEAIRENNTDRHHRQRKKPLITPLLF
                     DLHVQFGDTITPSASKIIKNKPHDLKNPKRSVSFKYKPNNSRSDLEESDLRPPILGTM
                     INYEESKLMDHKEENLKSRPISLRYLKDKDETEYANPLPFPQLWSKHLCKKSAESSVP
                     TPKLTNESNASKKENVSPPFTDQHESRTKKSMHSTDHSADSSTSRGKCPPKGITKESE
                     LTRNDEARKPHPVKQSIMLPLDCEDLLKNPKIKTIDLRPAVTVHTSMKQSHANPIIFY
                     DTEYVQMLFLTKRFTPYAMKCTERNIVLEKNYEVLKVLFSDEPSAVSEPIQQKHLQVF
                     SAEYAQKSINEKRKKKHDRLVSKKISPNTRYNLSQTFSSLSKKFVGYFDKDVTQGKSY
                     KANRFERFSKTKPPPTRKLTTLPIKYDSKPLKNIFEIHKLNNMTPLDNLLGLRA"
     exon            658..803
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            804..916
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            917..981
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            982..1126
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1196
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1197..1377
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1378..2448
                     /gene="4921539E11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2420..2425
                     /regulatory_class="polyA_signal_sequence"
                     /gene="4921539E11Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2448
                     /gene="4921539E11Rik"
                     /note="major polyA site"
ORIGIN      
        1 agacctctgc agatttcaga agtgagtaca cctgtcctgc cccagttata tccgctgaaa
       61 ggagcatggt aaaaactcct gaccacaata ctaccattag ctgctgagac cagtacggag
      121 acaggaggat gctgaacttg gtgttgttct cccttagcac tgacagggta cccgaggcct
      181 tcctgtgggt cttgtagtcc agcagtttac tttcagttcc caaaactaaa aagataaaca
      241 agaattcgat ctaaacgtca gcataagtaa gtcagtgaag aagatgagga ggaaaataag
      301 cacgatcgtg agaagccatt gtgcagaaga catggagttg ctcggtaaga ataaacacta
      361 agtggccgag aagctgattg ttcactgaca tctgagaaag ttagctgaga gaaacagaca
      421 gactgacaga cagatgcaag cctttgatcg catcttgaca agaacagcag aagatgaaat
      481 gatctgtggc ctgagaagac cctttgtgct gcaattataa aataaaaata aaataaagga
      541 gttacacaca ccaggcctct aactggtatt tattgacaaa cgatgacaga aaaaatcctg
      601 gaaaagtttg atgccctgga ggagaaagaa aggatacttg aagccatcag ggaaaataat
      661 actgaccgtc accaccgaca aagaaaaaag cctttgatta cacccctgct atttgacctt
      721 catgtgcaat ttggagacac aattacccca tctgcatcta agatcataaa aaataaacca
      781 catgatctta agaacccaaa aaggtctgtg tctttcaaat ataagcctaa caactccaga
      841 agtgatcttg aagagtcaga tctaagacca cctattcttg gaacaatgat aaactatgaa
      901 gaaagtaaat taatggacca caaagaagaa aatctaaaat caagacctat atctcttcgt
      961 tatcttaagg ataaagatga gacagaatac gccaatcccc tgccttttcc acagctttgg
     1021 tctaaacacc tgtgtaaaaa atcagcggag tcttcagtcc cgactcccaa actcaccaat
     1081 gaatccaatg ctagtaagaa ggaaaacgtc tctcctccat ttacagatca acatgaaagc
     1141 agaactaaga agtccatgca ttctacagac cactcagcag attctagtac aagcaggggg
     1201 aaatgccctc caaagggtat tacaaaagaa agtgagttaa ccagaaatga tgaagccaga
     1261 aagccccatc cagtcaaaca gagcatcatg cttcccctgg actgtgagga cctactgaaa
     1321 aatccaaaaa taaagacaat tgaccttcgt ccagcagtga cagtacatac ttccatgaaa
     1381 caatcccacg caaatccaat aattttctat gacactgaat atgtacaaat gctgttcctg
     1441 accaaaaggt ttacccccta cgctatgaaa tgtacagaaa ggaatattgt attagaaaaa
     1501 aattatgaag tactcaaagt tttgtttagt gatgaaccaa gtgctgtttc tgaacctatc
     1561 cagcaaaaac atttgcaagt cttctctgct gaatatgccc aaaagagtat aaatgagaaa
     1621 cgaaagaaga aacatgaccg tctggtttca aagaaaatat ctccgaacac tcgttataat
     1681 ttatcccaaa cattttccag cttaagcaaa aaatttgttg gttactttga taaagatgtt
     1741 actcaaggaa agagttataa ggcaaacaga tttgaaaggt tttccaaaac aaagccacca
     1801 cccacacgca aacttactac cttacctatc aagtatgact ccaagcctct gaaaaatata
     1861 tttgaaatac ataaactaaa caacatgacc ccattggata acctgctagg cttgagagca
     1921 taaagaatca tttgcgcagc aatatttaaa aacgagaaga accaggtacc aagatcatag
     1981 aagaaattat tatctgattc ctgatgttct gatggatgaa gtactcagtc cgaagtgctc
     2041 ggttcaagat caaccaacat tgttagctaa cactgggata taattaggaa attatgagca
     2101 agagggattc attcatgatt tatctttttg gttgtgagct taccttttcc aggatgagcc
     2161 atctctctag cctattcatg gcttatctca attatactta ccagacacca ctgttggcta
     2221 cagcacattc tcatttagta ccaactgtgg cataaattga tgagaaagtt gctgccagaa
     2281 gccacaaaat atcaacaacc ttgccctatg gttgactatc agcacagata caccaatagt
     2341 ttactgaata cggagttaat ggtagaccag catttcagat actcctgggg aaatcgtgtc
     2401 acgtgaccag tgtagtgtga ttaaaaaggc ttcataaaac ctgttaaa
//
