LOCUS       NM_026529               1032 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 2700062C07 gene (2700062C07Rik), mRNA.
ACCESSION   NM_026529
VERSION     NM_026529.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Magdaleno,S., Jensen,P., Brumwell,C.L., Seal,A., Lehman,K.,
            Asbury,A., Cheung,T., Cornelius,T., Batten,D.M., Eden,C.,
            Norland,S.M., Rice,D.S., Dosooye,N., Shakya,S., Mehta,P. and
            Curran,T.
  TITLE     BGEM: an in situ hybridization database of gene expression in the
            embryonic and adult mouse nervous system
  JOURNAL   PLoS Biol 4 (4), e86 (2006)
   PUBMED   16602821
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC125096.3.
            
            On Apr 29, 2007 this sequence version replaced NM_026529.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC084681.1, AK018391.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-110               AC125096.3         18499-18608         c
            111-133             AC125096.3         18395-18417         c
            134-333             AC125096.3         16330-16529         c
            334-533             AC125096.3         13755-13954         c
            534-1032            AC125096.3         11712-12210         c
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 13.18 cM"
     gene            1..1032
                     /gene="2700062C07Rik"
                     /note="RIKEN cDNA 2700062C07 gene"
                     /db_xref="GeneID:68046"
                     /db_xref="MGI:MGI:1915296"
     exon            1..110
                     /gene="2700062C07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..687
                     /gene="2700062C07Rik"
                     /codon_start=1
                     /product="UPF0711 protein C18orf21 homolog"
                     /protein_id="NP_080805.1"
                     /db_xref="CCDS:CCDS29101.1"
                     /db_xref="GeneID:68046"
                     /db_xref="MGI:MGI:1915296"
                     /translation="MRQKYYIEAAARGLVGSCPGQARYLLWAYSSTHEDNSTFQETCP
                     HCFQLLVLDNSRVRLKPKAKLTPKIQKLLNREARNDTLSFKEAKLLRKYKDSTSVLLI
                     TCRTCNRTVRHHGKSRSFLWALKSNAATAANKASPKTPKRTAPGSANLGQSTNGSKGK
                     SPSLTIRTPTSGQSTPICSSRNGSKRKKHFSQLKALLSQSASDKNPKLDFRHFLSSL"
     exon            111..133
                     /gene="2700062C07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            134..333
                     /gene="2700062C07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            334..533
                     /gene="2700062C07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            534..1032
                     /gene="2700062C07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1011..1016
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2700062C07Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1032
                     /gene="2700062C07Rik"
                     /note="major polyA site"
ORIGIN      
        1 ttcgcagcgt ttgagcgact gagttctcga gcgatgcggc agaagtatta cattgaagcg
       61 gctgctcggg gcctggtggg aagctgcccg ggccaggctc ggtacctcct atgggcctac
      121 agttcgacac acgaggataa cagcactttc caggaaacat gtccacactg cttccaattg
      181 ttggttctgg ataactctag agtgcgcctc aaacctaaag ccaaattgac accaaagata
      241 cagaaacttc ttaatcggga agcaagaaat gatacactca gttttaaaga agcaaaactg
      301 ttgagaaagt ataaagactc tacaagtgtg ctgctgatta cctgtagaac atgcaacaga
      361 acagtgagac accatggtaa gagtagaagc tttctgtggg ctctgaagag caacgccgcc
      421 actgctgcca acaaggccag cccgaagacg ccaaagagaa cggctccagg ctctgcaaac
      481 ctcggtcaga gtacaaatgg ttccaaaggc aagagtccct ccttgaccat cagaacacct
      541 acatctggac agtcaacacc catttgctcc tcaaggaatg ggagcaaaag aaaaaaacac
      601 ttctctcaac taaaagcact gcttagtcag agtgcatctg acaagaaccc aaagctggac
      661 ttcaggcact tcttatcttc tctatgaaga gaatggcctc tgaaagaaag aactgtctag
      721 tgcagctttt gtcctcactt tgatgtctga gcacatggaa accaagtcaa aagcaagctg
      781 ttctcgtcac ccttcagtgc tgtgggaagt gcctcattaa accaagcctc ctcggcctcc
      841 ctggtgaatg tgaagaccaa aaagtaaagg accaaaggga aaggtactgc tgcagccacg
      901 cctacagctc tatcttatct ccaggaccaa cggagcagaa ggaaccccag cctacaggtt
      961 gttctctgag ctccacatga gtgcccgccc tgcagcagat gaataaatgt aataaacggc
     1021 tttgaaaact aa
//
