LOCUS       NM_001309398            1885 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 2610042L04 gene (2610042L04Rik), mRNA.
ACCESSION   NM_001309398 NM_001033118 XR_032590
VERSION     NM_001309398.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Nakanishi N, Ryan SD, Zhang X, Khan A, Holland T, Cho EG, Huang X,
            Liao FF, Xu H, Lipton SA and Tu S.
  TITLE     Synaptic protein alpha1-takusan mitigates amyloid-beta-induced
            synaptic loss via interaction with tau and postsynaptic density-95
            at postsynaptic sites
  JOURNAL   J Neurosci 33 (35), 14170-14183 (2013)
   PUBMED   23986251
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Tu S, Shin Y, Zago WM, States BA, Eroshkin A, Lipton SA, Tong GG
            and Nakanishi N.
  TITLE     Takusan: a large gene family that regulates synaptic activity
  JOURNAL   Neuron 55 (1), 69-85 (2007)
   PUBMED   17610818
REFERENCE   3  (bases 1 to 1885)
  AUTHORS   Bischof JM and Wevrick R.
  TITLE     Genome-wide analysis of gene transcription in the hypothalamus
  JOURNAL   Physiol Genomics 22 (2), 191-196 (2005)
   PUBMED   15870395
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK011748.1 and AC188088.1.
            
            On or before May 29, 2015 this sequence version replaced
            NM_001033118.1, XR_032590.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK011748.1, SRR7345562.3014513.1
                                           [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1162              AK011748.1         1-1162
            1163-1248           AC188088.1         13765-13850         c
            1249-1885           AK011748.1         1249-1885
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 2.36 cM"
     gene            1..1885
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /note="RIKEN cDNA 2610042L04 gene"
                     /db_xref="GeneID:554327"
                     /db_xref="MGI:MGI:1914305"
     exon            1..34
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /inference="alignment:Splign:2.1.0"
     exon            35..172
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /inference="alignment:Splign:2.1.0"
     exon            173..335
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /inference="alignment:Splign:2.1.0"
     CDS             208..660
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /note="alpha42-takusan; alpha46-takusan"
                     /codon_start=1
                     /product="uncharacterized protein LOC554327"
                     /protein_id="NP_001296327.1"
                     /db_xref="CCDS:CCDS84074.1"
                     /db_xref="GeneID:554327"
                     /db_xref="MGI:MGI:1914305"
                     /translation="MTKQRSKINELEELKLYMRKISNDMEEMCGILNLYIYEDLNYRM
                     NTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNE
                     NVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNNSVK"
     exon            336..467
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /inference="alignment:Splign:2.1.0"
     exon            468..650
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /inference="alignment:Splign:2.1.0"
     exon            651..1885
                     /gene="2610042L04Rik"
                     /gene_synonym="takusan; Tksn"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttggatcc cagagcccag cctgggagga accggggctg ctggtgtacc accatcatcc
       61 ccaacactcc tgttcagaag atgggtgagg aaaccactca gccgatgacc agtgggaaaa
      121 atgagctaca agatcacctg atcttcatca gtgagaaagc tttgcacaag agggtctgct
      181 agaaatactt caacccaaaa ttctaaaatg actaagcaga gatcaaaaat aaatgaacta
      241 gaagaactga aattgtatat gaggaagatc agcaatgaca tggaggaaat gtgtggaatc
      301 ctgaaccttt acatatatga ggatttgaac tacaggatga acactgaatt caacatcatt
      361 aaatcacaac atgagaagac aatgttggat atgaataaaa tgatccagtc cataattggt
      421 tccatgcagt actccaagga actgatagaa gataactatt cctacagcat taaggaggac
      481 cacctcctcc gtgagtgcac tcaactcaac gaaaacgtaa ggatattact gaatgagaac
      541 agaaggctgc tggtggagca ggctggccac aagtgtcctg tggggaagaa aagaggttct
      601 ctgaggaggc cagcaagaac atctgtgtcc caagtgccaa ggaacaacag tgtgaaatag
      661 tccagcagaa ggcagaacat ggcacagacc acgacatgat ctccctcaaa gagaagtgct
      721 ggaggaggag cactgagtgt gcacaggaaa tacaccactg ttgcctctca tccctaataa
      781 ccatggctgt aatgggctgt atgctcctcc tttattttgt ttctttggta tgaacaggcc
      841 ttaatttcat ctagcctctg gcccaggaag agtgcacatt taaagggact cagagaaatg
      901 ctgagacaca ttaagagctg ctgggcatcc aggaagattc tgagagttta tatttatctt
      961 ttcctgatgg gtcatcatca ataattacat ggagatcagt caacaaaatt gtaaaacctt
     1021 ggatccaagt ctacaacatg tgttctgctt tgacttggga ggccatatcc ttcagaccca
     1081 cactccaaaa ggagagtgtt gcttaaattt ctcctgcaaa gattgttacc tccaggaact
     1141 acttttctac taagttgcca aggacagcca caggctgtaa ggctgtgcta caaaataagc
     1201 agactaagaa ttttgctttg cacaattttt gtggtttgat ttcggtttga gttttgatta
     1261 gtttagttat ttggtttttc tttttttcgt tcaaaatttt gttatttatt ggttatttat
     1321 tattctttta attaagttga tattttgata aggttataca cagtacatat tgactgtcag
     1381 ctttcagtta caattgagta cattgcattt attcttatga ctaacacagt gatctccaac
     1441 tcttcactca aagagccttg ttatttcagg tgtgatcatg aaagcccaca gatatcagac
     1501 ccagatggat ctctgcactc ttcatgggac ttgggctcca tagtttcttc tgagccagac
     1561 tgaactacaa agtccttcat acattcagta tggagagtat gtccaactgt ctggatagga
     1621 acttaatgat ggaaaactta cccatgctgc atcgttgctg tcaaatattt agctactgtg
     1681 aaaatactgt ggatgatggt gttgaacgca ttaatggcaa atacatcagt atttctgtaa
     1741 tagctctcat taaatcaaag cataatctaa gggaataaaa agctgtcaga aaacacagca
     1801 gtgtatgctt ctgcgttcct tcaaatatac aatcactggt aattgcaagt agagataata
     1861 aattccaaaa tctttttggg gatat
//
