LOCUS       NM_026655               3349 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 2310057M21 gene (2310057M21Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_026655
VERSION     NM_026655.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY035992.1, AK019097.2 and AK148008.1.
            
            On Nov 23, 2017 this sequence version replaced NM_026655.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK148008.1, SRR1660819.143430.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                BY035992.1         18-45
            29-2242             AK019097.2         3-2216
            2243-3349           AK148008.1         2224-3330
FEATURES             Location/Qualifiers
     source          1..3349
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 73.88 cM"
     gene            1..3349
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /note="RIKEN cDNA 2310057M21 gene"
                     /db_xref="GeneID:68277"
                     /db_xref="MGI:MGI:1915527"
     exon            1..219
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..1390
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /EC_number="3.6.1.3"
                     /note="uncharacterized protein C10orf88 homolog; protein
                     associated with ABC transporters"
                     /codon_start=1
                     /product="ATPase PAAT"
                     /protein_id="NP_080931.1"
                     /db_xref="CCDS:CCDS40159.1"
                     /db_xref="GeneID:68277"
                     /db_xref="MGI:MGI:1915527"
                     /translation="METAIEDAGLDRGPTLTSSWDAACGALTQSLFLTRTGPRAQDLD
                     FEQLLEPPAPSQDPVSLKSSLSPRDENPCFIYLNCGPNGGEEILSVGVLSSARNMEVY
                     LGEEYCGTSRGKTACTVLDDSEHEKILLYKKYLKLDSPTHACKIKLLSFGEKQCVLVS
                     KVVVHLRPRSADPSPRSAALGSRIDLDNIQTIMESMGSRLSPGAQQLMSMIRFQQQNR
                     LPIGDQLQSVLGSAGHKHLMALQSSPSPAVLDKASSTPFPFRTGLTPSAITENLKALI
                     DKSAQPSGEGNTTNHDEGHLMPQNHSLESDLKNAVSSFLPKKASGSSSVPSSELLPFL
                     QNLCSQVNHLRVGHNARWQENISKPREGMVGVPMEEQPVCSYLEKILSKNMELMEKKL
                     MDHIDERIYQLQEHIDAKMALLVDLLRGPNSPPPGMPLRHYDSRERLSNGER"
     exon            220..423
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /inference="alignment:Splign:2.1.0"
     exon            424..496
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /inference="alignment:Splign:2.1.0"
     exon            497..703
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /inference="alignment:Splign:2.1.0"
     exon            704..1155
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..3349
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1745..1750
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /note="hexamer: AATATA"
     polyA_site      1774
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /note="major polyA site"
     regulatory      2225..2230
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /note="hexamer: AATAGA"
     polyA_site      2245
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
     regulatory      3042..3047
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /note="hexamer: ACTAAA"
     polyA_site      3063
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
     regulatory      3305..3310
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
                     /note="hexamer: AATAAA"
     polyA_site      3347
                     /gene="2310057M21Rik"
                     /gene_synonym="3110040E10Rik; PAAT"
ORIGIN      
        1 gaaacgcaag ctctgcgaga gaggttccga cgccgcctgg gttggaggag acagaatgga
       61 gaccgcgatc gaagacgcgg gactggaccg cggcccgacg ctgacctcgt cctgggatgc
      121 ggcgtgcggg gcgctgaccc aaagcctttt tcttacccgg actgggccac gtgcccaaga
      181 cttggacttc gagcagctac tggagccgcc agctccgagc caggatccgg ttagtctgaa
      241 aagcagcctg agcccccgag atgaaaaccc ctgcttcatt tacctgaact gtggccctaa
      301 tgggggtgaa gaaatccttt cggttggcgt tctgagttca gcaagaaaca tggaagtata
      361 cttaggagag gagtattgtg gaaccagtcg aggcaagact gcctgcactg tcctggatga
      421 cagtgaacat gaaaagatct tgttatacaa aaaataccta aaattggatt ctcccacgca
      481 tgcctgtaaa ataaagctgt tgtccttcgg ggagaagcag tgtgtgcttg tcagtaaggt
      541 ggtggtgcac ttgaggccac ggtctgcaga tccttcaccg cgctctgctg ctctgggatc
      601 acggatagac cttgacaaca tccaaaccat aatggagtcc atggggtcca ggttatcgcc
      661 tggagcgcag cagctcatga gcatgattag gtttcagcag cagaatcgtc ttcccatcgg
      721 ggatcagctt cagtcggtgt tgggaagcgc aggacacaag catctgatgg cgctgcagtc
      781 gtcaccgtct ccagcagtct tagacaaggc atcctctaca cctttccctt ttagaactgg
      841 attgacccct tcagccatca ctgaaaattt aaaggctctt attgataaaa gcgcacagcc
      901 atctggagaa ggaaatacca caaaccacga tgagggtcac cttatgccac aaaaccattc
      961 ccttgaaagt gatcttaaaa acgcagtgtc ttctttctta ccaaagaagg caagcggcag
     1021 ctcaagtgtg cccagctctg agctgctgcc ttttctccag aacttatgta gtcaggtcaa
     1081 ccatctccgc gtgggacata atgccaggtg gcaagaaaac atctccaagc cccgagaggg
     1141 catggtcggg gttccgatgg aagagcagcc tgtttgctcc tacttggaaa agattctttc
     1201 taaaaacatg gaactgatgg aaaagaagct tatggaccac attgatgaga ggatctatca
     1261 gctccaggaa cacatagatg ctaaaatggc tttgttagtg gacttgctgc gaggccccaa
     1321 ctccccaccc ccagggatgc ctctaagaca ctatgactcc agagaaagac tttccaatgg
     1381 agaaagataa gctatgcaca tactgttatt gcagatattt attatatatt tattacaaag
     1441 ccagaatcca aaaaggttgt gaaaatcgag tctttaatgt cctttgaagg accgttgtct
     1501 tacatgaagt gacctccgtg cttgtttgca ttgcgcttgt tactgtaaat ccagggctgt
     1561 gcgccagcag ccctcctgat agtcgtaagt tattctgctt gctatatttt tcactcttac
     1621 agaaatgtat acttgtgttg ctcaactgtt tcagatgttt aaggacttct aatgcacttc
     1681 gttagcttgt gttgtatatt acatgtgttt gaagtggatt ttttatttat acagatacct
     1741 gtaaaatata tagtctcagg agtatgaaaa gtaataagat atttggtttt tttttctaat
     1801 taattttgga agttggatgc ttggactccc tcattcagat caccagtttc cacttcctat
     1861 tgtttgtctg agatgagcgt gtgccgtgtc tgggccgttt gagatagttt acacggtggg
     1921 gggagcgctg cttttcatta cagtgcagct ggagattgct cggtttcagt gttaggattt
     1981 cacatttggt gctgggttag gtgaaatgga aggcagtctc ttctgtaact gacagggact
     2041 tctcccagag gcctttctag catgtatagt gtgtgacatt ctgagaatct aaaatgaggg
     2101 ttaagctatg aatccagggc actgcagttc ccagcagact taagttttca gaattttact
     2161 gttatatttg tgttggtgat acagctgtgc ctaaagagat tgctctgaag accaccagta
     2221 agtgaataga attcttttca gctaatttga ttacgttgtt tcttcttttt ttaaggggga
     2281 tattttgtac gtatccagta ttttgacaaa ctattgattt taatcataca gccaagatga
     2341 cccagcatgt aggacacacc acactttggc catctttggt gggccaaggt tgggatggat
     2401 ggtcacacca cgtgtagatg taagatgtca tatcttgatg agtaagaaga gagccagccc
     2461 gtggtagttg tggctcctcc ctaactagca gagtaccacc cttgacttag tagtgccctc
     2521 tggcccatca atcatcagct ggggctcccc gggtctgcag gatgggactg aacccctaag
     2581 tgaaggcctt gaaactgtct tcatgtccgc ctgacacacc tttcctgctt cacctccacg
     2641 gccgagagtc cctgggttct cacttgatcc ttgtgaccta gggactgagc aggtagcagg
     2701 agtagccaat gggaagaact tagagaaaag ccagaagtat aaaagatggg aacacatttc
     2761 ataaaccata cagtgtctgt cagagagtaa catggaccct gaagaattat aaccctccag
     2821 gaagtcctgt gttaggttgg gaatagcctg aagcccacaa ctaggacagc ctcctgccag
     2881 gaaagacggc tcacggtctg aggagctctt tcaccgttac gtctatacac atacatactt
     2941 gtttcctggc ttttgtttca tcctctctgt agattgtatc actgctatag gaaaagtggg
     3001 gagaaaggaa cacctcccta tcccaaccct ccccagttct gactaaaact gtaaacacac
     3061 ccatttcctt tttctcgatt ttttttttcc taaagaagtg gctagtacca gagtctccag
     3121 attcaggtaa cagcttgata tgggatccat aagtgtcaaa ttgggctttg tgtgaaaaag
     3181 aaaaactctt gtggccacca tgcttgatcg tggggctgtg caccctgaca tgtcaagtgg
     3241 ccttagtcaa aaacagctga gcttttcctc taccaccatt gtcgtcgtcg aagcacagtt
     3301 aaagaataaa aactagattg gctatctcaa agctagttca tatggaact
//
