LOCUS       NM_025865               1248 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 2310030G06 gene (2310030G06Rik), mRNA.
ACCESSION   NM_025865
VERSION     NM_025865.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC113987.11.
            
            On Feb 20, 2019 this sequence version replaced NM_025865.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC027409.1, AK009541.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                AC113987.11        5796-5881
            87-124              AC113987.11        10025-10062
            125-189             AC113987.11        10963-11027
            190-1248            AC113987.11        11574-12632
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 27.75 cM"
     gene            1..1248
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /note="RIKEN cDNA 2310030G06 gene"
                     /db_xref="GeneID:66952"
                     /db_xref="MGI:MGI:1914202"
     exon            1..86
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..438
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /codon_start=1
                     /product="uncharacterized protein C11orf52 homolog"
                     /protein_id="NP_080141.2"
                     /db_xref="CCDS:CCDS23170.1"
                     /db_xref="GeneID:66952"
                     /db_xref="MGI:MGI:1914202"
                     /translation="MGNRLCCGGTWSCPSTFQKKSKTGSHPRPTLSILKQQQLWQNGT
                     KDYETTAPTYEQVLYPPASQKKTSNSTSEESDLHYADIHVLRQIRPHSLHTVKCLHSE
                     SATEYATLRFPQATPQYDSNNGTLV"
     exon            87..124
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            125..189
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            190..1248
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1227..1232
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1241
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
     polyA_site      1248
                     /gene="2310030G06Rik"
                     /gene_synonym="2610024D04Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcaaacctct ttatgtctga aaaccagctg ggctccctgg gagacacaac cgccatggga
       61 aaccggctct gctgtggggg aacctggagc tgcccatcga ctttccagaa gaaaagcaaa
      121 acagggagcc acccaagacc cacattgagc atcctgaagc agcaacagct gtggcagaat
      181 ggcacaaagg actatgagac aacagcaccc acgtatgagc aagtgttgta cccgcctgca
      241 tctcagaaga aaacttcaaa ctccacgtcg gaggagagtg acttgcatta tgcggacatt
      301 catgtgctca ggcaaattcg gccacactct ctccacacag tgaaatgcct gcattcagaa
      361 tctgctacag agtacgccac ccttcgcttc ccccaggcca cacctcagta tgacagcaac
      421 aacggaaccc tggtgtgagc cctcgggaag acgttccgat ttctacgatt ttaccatcct
      481 gtgggaataa cctactgttc tcgagaacaa ggacaatggc catgttttaa tcttaaagga
      541 caccagagca tctggaatta tgggtctccc tactctttcc actatgaatc ttttggtttg
      601 ccactgttgt ggtaaggtta actatgggtg gactgagttc caaaaaaata tttatgtgaa
      661 aaaaaaaggt tgacctttga cccctaacat tatttgcatt ctcaaatgca gcaagaaccc
      721 tctatgcact ttggctgttt ctgataggag ttatttaatg atatttgatt ttcttagggc
      781 tttttgtcgt tatttggtta tgtcttggtt gttttgtttt ttgaggaaca ggatctcatg
      841 tagcccaggc tggcctggaa cttgctacat agctgaagat ggccttgaaa ttatgatcta
      901 tcccagcctc ttactaccag tgctggggtt acagatgtga ccactgtgct agataattat
      961 attccgtttt tacacctata ccccaaaacc gaagagaaac gctcttcgga aattttctga
     1021 gcctttgcac acagcctcgg agctactgtg gacaaccaac ctaatagcta ggtcaaaggc
     1081 tccagacctt atcacagaga tgggactcca actgttgagc ctcaaagact tcaatttgtc
     1141 gacattaaca gccacgagac cacatcctgg agaaagtctc ctggcaggac tgttagctct
     1201 cgtctgaaga acctttcgaa tcaattaata aatagtatgt agaacagg
//
