LOCUS       NM_025521               1659 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 2310011J03 gene (2310011J03Rik), mRNA.
ACCESSION   NM_025521
VERSION     NM_025521.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Skarnes,W.C., Rosen,B., West,A.P., Koutsourakis,M., Bushell,W.,
            Iyer,V., Mujica,A.O., Thomas,M., Harrow,J., Cox,T., Jackson,D.,
            Severin,J., Biggs,P., Fu,J., Nefedov,M., de Jong,P.J., Stewart,A.F.
            and Bradley,A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Watahiki,A., Waki,K., Hayatsu,N., Shiraki,T., Kondo,S.,
            Nakamura,M., Sasaki,D., Arakawa,T., Kawai,J., Harbers,M.,
            Hayashizaki,Y. and Carninci,P.
  TITLE     Libraries enriched for alternatively spliced exons reveal splicing
            patterns in melanocytes and melanomas
  JOURNAL   Nat Methods 1 (3), 233-239 (2004)
   PUBMED   15782199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ185647.1, AK009305.1 and BY596174.1.
            
            On Sep 6, 2006 this sequence version replaced NM_025521.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK046452.1, BC023429.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-408               CJ185647.1         2-409
            409-1204            AK009305.1         392-1187
            1205-1659           BY596174.1         37-491
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..1659
                     /gene="2310011J03Rik"
                     /note="RIKEN cDNA 2310011J03 gene"
                     /db_xref="GeneID:66374"
                     /db_xref="MGI:MGI:1913624"
     exon            1..366
                     /gene="2310011J03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             237..566
                     /gene="2310011J03Rik"
                     /codon_start=1
                     /product="UPF0449 protein C19orf25 homolog"
                     /protein_id="NP_079797.1"
                     /db_xref="CCDS:CCDS24017.1"
                     /db_xref="GeneID:66374"
                     /db_xref="MGI:MGI:1913624"
                     /translation="MNSKAKKRVVLPTRPAPPTVEQILEDVRGAPAQDPVFTALAPED
                     PPDPSPRAEDSEIQQEQIYQQSRAYVAMNERLRQAGEALRQKFDGLRQAGQRLEQDIS
                     QVTSATS"
     exon            367..1659
                     /gene="2310011J03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1184..1189
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2310011J03Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1206
                     /gene="2310011J03Rik"
                     /note="major polyA site"
ORIGIN      
        1 aagcaggaag cggaagcggt ggcggccgcc taggttcttg gaacgaagat aggcagcggg
       61 gtgttccaag agcaaactgg cgcggagatc gagccaaact ccgaggttcc gggaggaggg
      121 aaagcgagac ggggtaggga cctcggcgca ggtctgtaag gggtgcgtag gagttcgcga
      181 ggtgggcggg ccgagccgaa agtggacccc cagttagcgc gcgctccacc tacaagatga
      241 actccaaggc gaagaaacgc gtggtactgc ccactcgccc cgcgcctccc acggtggagc
      301 agatcctgga ggacgtgcga ggggcacccg ctcaagatcc tgttttcact gccctggccc
      361 cggaagaccc cccagaccca tccccaaggg ctgaggactc tgagatccag caggagcaga
      421 tctaccaaca gagccgggcc tacgtggcta tgaatgagag gctgcggcag gcgggggaag
      481 ctctgagaca gaagttcgat ggccttcggc aagctggtca gcggctggaa caggatatca
      541 gccaggtgac ttcagccacc tcctagagcc gaagttacac ctgatgtcct tggtccaggc
      601 ctgggcacct agcaaccaga ggctctgggt caacatttgc tgtcccaacc ctggcccggg
      661 gagacccagt ggcccacctt gccagctagc agctttgttc cctcttccat ccttaatggc
      721 ctctaattca tgatgggact tagggacatg gccacctcct cattatgggg acactggcct
      781 aaattgcatc aaggacttga ttgcaggtcg gggctcaaag ccagtctgcc ccatagtgac
      841 cggtgtgctc ttctgtccca tgtcaccctg ggcagtgaag gtcttcatcc ccagcatcca
      901 cagcaggcca gccactggca tcttggttga gagaatgggc tagctgcacg cttcatagag
      961 cctggctcag gccctctagg gctacactgc cttctcagtt ctccctgggg ccggggagac
     1021 tcatcaaggg agtttccatt ctggggagcc caggggtcca agaggaactc aaaggccagg
     1081 tccctgtgtg tggtgaatgt tgccccttct ggatctgggg tttagtttgc cttcttgcag
     1141 aagacccacc actcttgggg tggctggact ttagttctgg aagattaaag atgtttgatg
     1201 cctgaacaca gttctccctt aagccaggct agatcactgg gtacccaagc cccctgccac
     1261 cccttggcag ctcaggcgct agctaccaca cctgcctcct tgggtcccaa gctggctgga
     1321 actgttttgt cagaagtggc cttagcttgt ggctacatca ttcctgacac tccacattcc
     1381 tggcggtcac ggggtccaac ttgccctgac cagtgcagct tggactcctg gtccccacct
     1441 ccaccatgac acctccacca caaatgacca gtggctgatg gccaggtaca gcttggctga
     1501 acctcagtca acctcggctc cagcatgtgg ggatgtgaca cgctgtcgag tcagtgggga
     1561 gctcagaaac accttctggg gttgaacaga gctgtagaag aaggtcttgg aacgaccccc
     1621 cccccccaga gccagtgata aagatgaagc tacagatcg
//
