LOCUS       NM_027981               1930 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 2310002L09 gene (2310002L09Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_027981
VERSION     NM_027981.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Pagliarini DJ, Calvo SE, Chang B, Sheth SA, Vafai SB, Ong SE,
            Walford GA, Sugiana C, Boneh A, Chen WK, Hill DE, Vidal M, Evans
            JG, Thorburn DR, Carr SA and Mootha VK.
  TITLE     A mitochondrial protein compendium elucidates complex I disease
            biology
  JOURNAL   Cell 134 (1), 112-123 (2008)
   PUBMED   18614015
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK009097.1 and AK009124.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK009124.1, BY708963.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-22                AK009097.1         2-23
            23-1930             AK009124.1         23-1930
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 36.06 cM"
     gene            1..1930
                     /gene="2310002L09Rik"
                     /gene_synonym="2310003M01Rik"
                     /note="RIKEN cDNA 2310002L09 gene"
                     /db_xref="GeneID:71886"
                     /db_xref="MGI:MGI:1916780"
     exon            1..274
                     /gene="2310002L09Rik"
                     /gene_synonym="2310003M01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..801
                     /gene="2310002L09Rik"
                     /gene_synonym="2310003M01Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC71886 isoform 1"
                     /protein_id="NP_082257.1"
                     /db_xref="CCDS:CCDS51211.1"
                     /db_xref="GeneID:71886"
                     /db_xref="MGI:MGI:1916780"
                     /translation="MAKCLVKIRTQRSLHLHMMNHCSSNVFVRLLKHGSKVIPRNAGA
                     PLSKVDASEHMVASSPVKGAQSAGSPRKEEDKVKEDPLILSELAYNTSASLLPTQVDD
                     DEVDMLFDCPSRFVLEREDTDTFEDVEADENVFLMAEEEKVKEAHQALSWSYSILTGR
                     IWLNPLVKRCSRLLVVGLGLLLFVFPLVLLLLESGIDISFLFKNMNLSNFTMNTTVL"
     exon            275..1930
                     /gene="2310002L09Rik"
                     /gene_synonym="2310003M01Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacagtgtgt cctgccttgg tcctttgaaa cagaatggac agtgagcaaa aggtcaaagc
       61 tgttgttgct ggttgcatat gtacagggac actactgcca agagaccctt aggaagatct
      121 cattatatga gataatatat ctcaaatatg gcaaaatgct tggtgaagat caggactcaa
      181 cgaagcctcc atttgcacat gatgaaccac tgcagcagta atgtgtttgt ccgtctgctg
      241 aaacacggct ccaaggtcat acctcgaaat gctggtgccc ccttgtctaa agtggatgct
      301 tctgagcaca tggttgcaag ctcaccagtg aagggagctc agagtgcagg ttctccaagg
      361 aaagaggaag ataaagtaaa agaagacccg ttgatcctct ctgaactagc gtataacacc
      421 agcgccagcc tgctccctac ccaagtggat gatgatgaag tagacatgct atttgactgt
      481 ccatctaggt ttgtgttaga aagagaagac acagatacgt ttgaggatgt agaagcagat
      541 gaaaatgtct ttttgatggc tgaagaggag aaggtgaagg aagctcacca agctttgtca
      601 tggagctatt ccatcctgac cggccgtatc tggctcaacc ctctggtcaa gcgttgctcc
      661 aggctcctgg tggtgggcct gggattgctt ctgtttgtat ttccccttgt actcctcctt
      721 ttggagtcag gtattgatat ctccttctta ttcaaaaaca tgaatttgag caattttact
      781 atgaatacta ccgtcctcta aaggagtagg tgactgggaa ggtcaacatt ttttttaaca
      841 tgttgggctt ccctgataag ataaaggact gtattcaaaa ttaaaattac ctttttcagt
      901 agatgccatg gtccaaatgg tcaaggatca taaagctgca tgccaaattc ttaaattggc
      961 tttctatgcc ttaatattct taatacaagt ttaaaacaaa ttctatttgc tatatgcagt
     1021 ctttaaccaa aaatatgtta tttttatcgc agtgtagaca ttctctttat cttacctcaa
     1081 aatgacttac ttttcctatt tttttcattg tcatcactat aaaagggaat gttaataatt
     1141 agaattttag tcacagtcca agagaatact tttcaatata attcttagtg aaaaagcatt
     1201 ctctaagaaa tgtttataca actaaattta tgcttgggtt tttctttcag tttttaaaga
     1261 gtacttctat agtcaaagaa ttttggtaaa cttttcctat tttatttttt gcaaggaaaa
     1321 gccccattga attttgtaag tttacatatt gtaaacctag tgcacaaaga tgtatcagaa
     1381 attattttaa tgttatgtca ccagttttta caaaatatat gtttggctga aaaagctaat
     1441 actttataac tatctgcaaa taatatataa aacttagtgg aaagaagttg tagtaagttg
     1501 tccaaacata tgctggaact ggaggtatat agagagaaca ctaaatgcca tgtgaggacc
     1561 atctttcaac atttaggcat gataatctag tactttcatt tttgttatgt ccatacattt
     1621 agcctagatt agcaggatat tttgacaata aagtgaaatt gaagaagaaa tacaacaaag
     1681 atagactagt tcattatata ttcttcacta attggagtga aagatgacca gttggacaga
     1741 tggaaggtac caaagaagaa ttctgatgac acctgtggcc aattggtatc tcatggggaa
     1801 atgattgtga tgtaggacat tctacagtgt aaggatccgt tctcctgctc ctcaactcta
     1861 cagcagcaca tttcagtgaa tctgaatggc agtatacaaa ttttaaagta aaatattttt
     1921 gatccttcac
//
