LOCUS       NM_027090                612 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 2300009A05 gene (2300009A05Rik), mRNA.
ACCESSION   NM_027090 XM_204313 XM_898537 XM_925361 XM_925362
VERSION     NM_027090.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK158428.1, AK009046.1 and BY090300.1.
            
            On or before Jan 23, 2009 this sequence version replaced
            XM_925361.2, XM_925362.2, XM_898537.2, XM_204313.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100363.1, AK009046.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-47                AK158428.1         3-49
            48-588              AK009046.1         47-587
            589-612             BY090300.1         332-355
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 34.06 cM"
     gene            1..612
                     /gene="2300009A05Rik"
                     /note="RIKEN cDNA 2300009A05 gene"
                     /db_xref="GeneID:69478"
                     /db_xref="MGI:MGI:1916728"
     exon            1..369
                     /gene="2300009A05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..497
                     /gene="2300009A05Rik"
                     /note="uncharacterized protein C15orf61 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C15orf61 homolog
                     precursor"
                     /protein_id="NP_081366.1"
                     /db_xref="CCDS:CCDS52830.1"
                     /db_xref="GeneID:69478"
                     /db_xref="MGI:MGI:1916728"
                     /translation="MEALRRAHEATLRLLLCRPWASGAASRPKPRASEVLTQHLLQRR
                     LPHWTSFCVPYSAVHNDQFGLSHFNWPVLGANYHVLRTGCFPFIKYHCSKAPWQDLAP
                     QDRFFTALKVINLGIPTLLYGLGSWLFARVTETVHTSYGPITIYFLNKEDEGAMY"
     exon            370..598
                     /gene="2300009A05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      579..584
                     /regulatory_class="polyA_signal_sequence"
                     /gene="2300009A05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      598
                     /gene="2300009A05Rik"
                     /note="major polyA site"
ORIGIN      
        1 cggctccccg gcgtgccccg gccatggagg ccctgcggag ggcccacgag gctacgctgc
       61 ggctgctgct gtgccggccc tgggcctcgg gcgccgcctc ccgcccgaag ccccgcgcct
      121 cggaggtgct gacgcagcac ctgctgcagc ggcggctgcc gcactggact tccttctgcg
      181 tgccctacag tgcggtccac aacgaccagt tcggcctgtc gcacttcaat tggccggtgc
      241 tgggcgccaa ctaccacgtc ctgcgcaccg gctgcttccc cttcatcaag taccactgct
      301 ccaaggcgcc ctggcaggac ctggccccgc aggaccgctt cttcaccgcg ctcaaggtca
      361 tcaacctggg tattccaact ttattatatg gacttggctc ctggttattt gccagagtca
      421 cagagactgt tcataccagt tacggaccaa taacaatcta ttttctaaat aaagaagatg
      481 aaggtgccat gtattgaaag tgtgcattgg aaaacacaaa tgtcaatgaa tttgttcccc
      541 tgtgtgtgtg tatgcagtat ttatttttga tcctttaaaa taaaatgctg gcaaagccaa
      601 aaaaaaaaaa aa
//
