LOCUS       NM_001243117            2700 bp    mRNA    linear   ROD 13-AUG-2022
DEFINITION  Mus musculus RIKEN cDNA 2010315B03 gene (2010315B03Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_001243117
VERSION     NM_001243117.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   3  (bases 1 to 2700)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   4  (bases 1 to 2700)
  AUTHORS   Gray PA, Fu H, Luo P, Zhao Q, Yu J, Ferrari A, Tenzen T, Yuk DI,
            Tsung EF, Cai Z, Alberta JA, Cheng LP, Liu Y, Stenman JM, Valerius
            MT, Billings N, Kim HA, Greenberg ME, McMahon AP, Rowitch DH,
            Stiles CD and Ma Q.
  TITLE     Mouse brain organization revealed through direct genome-scale TF
            expression analysis
  JOURNAL   Science 306 (5705), 2255-2257 (2004)
   PUBMED   15618518
REFERENCE   5  (bases 1 to 2700)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   6  (bases 1 to 2700)
  AUTHORS   Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido
            I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K,
            Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli
            R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A,
            Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V,
            Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF,
            Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik
            A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ,
            Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL,
            Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR,
            Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K,
            Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R,
            Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid
            J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou
            M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita
            M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C,
            Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z,
            Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N,
            Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K,
            Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A,
            Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A,
            Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M,
            Waterston R, Lander ES, Rogers J, Birney E and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group Phase I
            & II Team
  TITLE     Analysis of the mouse transcriptome based on functional annotation
            of 60,770 full-length cDNAs
  JOURNAL   Nature 420 (6915), 563-573 (2002)
   PUBMED   12466851
REFERENCE   7  (bases 1 to 2700)
  AUTHORS   Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y,
            Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa
            K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T,
            Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K,
            Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W,
            Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo
            Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F,
            Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M,
            Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N,
            Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C,
            Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA,
            Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J,
            Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto
            N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF,
            Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L,
            Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S and
            Hayashizaki Y.
  CONSRTM   RIKEN Genome Exploration Research Group Phase II Team and the
            FANTOM Consortium
  TITLE     Functional annotation of a full-length mouse cDNA collection
  JOURNAL   Nature 409 (6821), 685-690 (2001)
   PUBMED   11217851
REFERENCE   8  (bases 1 to 2700)
  AUTHORS   Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno
            H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii
            Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto
            H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K and
            Togawa Y.
  TITLE     RIKEN integrated sequence analysis (RISA) system--384-format
            sequencing pipeline with 384 multicapillary sequencer
  JOURNAL   Genome Res 10 (11), 1757-1771 (2000)
   PUBMED   11076861
REFERENCE   9  (bases 1 to 2700)
  AUTHORS   Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M,
            Konno H, Okazaki Y, Muramatsu M and Hayashizaki Y.
  TITLE     Normalization and subtraction of cap-trapper-selected cDNAs to
            prepare full-length cDNA libraries for rapid discovery of new genes
  JOURNAL   Genome Res 10 (10), 1617-1630 (2000)
   PUBMED   11042159
REFERENCE   10 (bases 1 to 2700)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CAAA01180111.1, CK618160.1, AK008571.1 and AA178344.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164140
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-49                CAAA01180111.1     44108-44156         c
            50-657              CK618160.1         1-608
            658-1931            CAAA01180111.1     24031-25304         c
            1932-2684           AK008571.1         1-753
            2685-2700           AA178344.1         328-343
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9"
     gene            1..2700
                     /gene="2010315B03Rik"
                     /note="RIKEN cDNA 2010315B03 gene"
                     /db_xref="GeneID:630836"
                     /db_xref="MGI:MGI:1919321"
     exon            1..135
                     /gene="2010315B03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..1509
                     /gene="2010315B03Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC630836 isoform 1"
                     /protein_id="NP_001230046.1"
                     /db_xref="GeneID:630836"
                     /db_xref="MGI:MGI:1919321"
                     /translation="MYLEDSPATSFRLGPGWSVQRRRHQRNAMTYADVHVNFTWEEWA
                     LLNPSQKSLYKEVMLETYENLTAIGYNWEDHYIEEQFQSSRRDGRHKRGHTGEKPYEC
                     NHCGTAFARHGHLQRHKGTHTGEKLYECNRCGKVFAWNCHLRIHKRTHSGEKPYECDQ
                     CGTAFASHCRLQRHKRTHTGEKPYECNQCGKAFTQHSTLQVHKRTHTGEKPYECSQCG
                     KAYSRHSHLQRHKRTHTGEKPYVCNQCGKAFAYQNSLQYHKRTHTGEKSYECKQCGKF
                     FPCRKHLQIHKRTHAGQKGYECNKCGKAFAFHSHFQRHKRHIGEKPYECNHCDKAFAS
                     HNNLQKHIRRHTGEKPYKCNLCDKAYAHHSHLQTHERVHTEEKPYKCNQCDKAFSQQS
                     SLQVHKRIHTGEKPYECNQCGKAFTCHRYLQRHKRTHTGEKPYECNQFGKIFAQHSTV
                     HSIKKGNI"
     exon            136..210
                     /gene="2010315B03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            211..337
                     /gene="2010315B03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            338..398
                     /gene="2010315B03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            399..2696
                     /gene="2010315B03Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggtgacaa ggagagtttt tccgggtgcc atgttgcagg ttccctgtag ctgagcaggc
       61 ttgagtggtt ggttggttcg gtgctctgag ccctgctgct gggtgctgtg aggcgcgctc
      121 cgaagttgcg acatgtacct ggaagacagt cctgcaactt ctttcaggct gggccctggc
      181 tggtcagtgc aaaggagaag acaccagaga aatgcaatga cctatgctga tgtgcatgtg
      241 aatttcactt gggaagagtg ggctttgctg aatccttccc agaagagtct ctacaaagag
      301 gtgatgctgg agacctacga gaacctcact gctataggct acaattggga agaccattat
      361 attgaagaac aatttcaaag ttctagaaga gatggaaggc ataaaagagg tcacactgga
      421 gagaaaccct atgaatgtaa tcattgtggt acagcctttg caaggcatgg tcatctgcaa
      481 aggcataaag gaacgcatac tggagagaaa ctttatgaat gtaatcgatg tggtaaagtc
      541 tttgcatgga actgtcatct ccgaatccat aaaagaacac atagtggaga gaaaccttac
      601 gaatgtgatc aatgcggtac agcctttgca agtcattgtc gtcttcaaag gcataaaaga
      661 acacacactg gagagaaacc ttatgaatgt aatcaatgtg gtaaagcctt tacacaacac
      721 agtactctac aagttcataa aagaacacat actggagaga aaccctatga atgtagccaa
      781 tgtggtaaag cctattcacg tcacagtcat ctccaaagac ataaaagaac acatactgga
      841 gagaaacctt atgtatgtaa tcaatgtggt aaagcctttg cttatcaaaa tagtctccag
      901 tatcataaaa gaacacatac tggagagaaa tcttatgaat gtaagcaatg tggtaaattc
      961 tttccatgcc gtaagcatct tcaaatacat aaaagaacac atgctggaca gaaaggctat
     1021 gaatgtaaca aatgtggtaa agcctttgct tttcatagtc atttccaaag acataaaaga
     1081 catattggag agaaacctta tgaatgtaat cactgtgata aagcctttgc aagtcacaat
     1141 aatcttcaaa aacatataag aaggcatact ggagaaaaac cttataaatg taatctgtgt
     1201 gacaaagcct atgcacatca cagtcatctc caaacacatg aaagagtgca tactgaagag
     1261 aaaccctaca aatgtaatca atgtgataaa gccttttcac aacaaagttc tctacaagtg
     1321 cataaaagaa tacatactgg agagaaaccc tatgaatgta accaatgtgg taaagccttt
     1381 acatgtcaca gatatctcca aagacataaa agaacacata ctggagagaa accctatgaa
     1441 tgtaaccaat ttggtaaaat atttgcacaa catagtactg tccacagcat aaaaaaagga
     1501 aatatttgag agaaactcta tgaatataat gtgtggtaaa acctttgcag atcaaagtca
     1561 ttttcaaagg catgaaagaa ttcatactgg agagaaacct catgaatgta tttaatatgg
     1621 tgacaccttt gcatatttct atagtcttca tcgtcatgaa agtattccta ctggagagaa
     1681 attctatgaa tgtaagcagt gtggtaaagc ctttgtgtta tggattcatt tagatccaac
     1741 acaagtcaaa caccagatca atgcaaatga caaaaattaa ttgtaataaa gctgctactg
     1801 attaagcagg acatattata atacagaaca tattctggag gtgaaatgca acccatgtta
     1861 tggagctttt aagcttggaa agcacaaata tctgtgccaa gttacagcta catttttttc
     1921 tatccatcag catttaggga taatagcttt ttgtttttgt ttttgttttt gttttgtttt
     1981 tcgagacagg gtttctctgt atagccctgg ctgtcctgga actcactttg tagaccaggc
     2041 tgtcctcgat ctcagaaatc cgcctgcctc tgcctcccga gtgctgggac taaaggtgtg
     2101 cgccaccaca cctggctgat aatagctttt cttatgtgat tcatctatga cagtaaatac
     2161 aaaaatgcat gttttacaat ctaatcaatc atacccattt gttcttttgt aattaggaac
     2221 agtcattatg tttgggggaa ccaaagatgg taacagatgc tgtagttagg aacagtcatg
     2281 ttttagggaa tagaagccat ggttaggttg atatgctgtg gatgtgtata cattatttga
     2341 tgttcattgc ttctttatgt tcatatcagt taccatttga aagttcccct taaagtactg
     2401 tcttctaagg gaatcatccc aagatggtaa tgtagcagca aagataatat aacagcaatg
     2461 agatttatta attttttctg ttgtttgtgt gtaatgcgat tattggctca ggttgccaac
     2521 tttgcatacc acagaaattt tccactgagc cgactcactg aggttcaaat aagattaatt
     2581 gaaacatttc atctctaaaa tattgtcttc ttttcaaatt gtaaacatat tgtcatctaa
     2641 ggatcgagga aaacaggatg cttttagtaa taaattctat ttgcaaaaga aaatgaaaaa
//
