LOCUS       NM_026333               1257 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 2010106E10 gene (2010106E10Rik), transcript
            variant 2, mRNA.
ACCESSION   NM_026333
VERSION     NM_026333.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Fossat N, Tourle K, Radziewic T, Barratt K, Liebhold D, Studdert
            JB, Power M, Jones V, Loebel DA and Tam PP.
  TITLE     C to U RNA editing mediated by APOBEC1 requires RNA-binding protein
            RBM47
  JOURNAL   EMBO Rep 15 (8), 903-910 (2014)
   PUBMED   24916387
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK017156.1 and AV080583.1.
            
            On Dec 12, 2009 this sequence version replaced NM_026333.3.
            
            Transcript Variant: This variant (2) uses an alternate in-frame
            splice site in the central coding region, compared to variant 1,
            resulting in an isoform (2) that is shorter than isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK017156.1, BC139480.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-11                AK017156.1         2-12
            12-1037             AK017156.1         14-1039
            1038-1050           AV080583.1         88-100
            1051-1257           AK017156.1         1052-1258
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 48.76 cM"
     gene            1..1257
                     /gene="2010106E10Rik"
                     /note="RIKEN cDNA 2010106E10 gene"
                     /db_xref="GeneID:67715"
                     /db_xref="MGI:MGI:1914965"
     exon            1..146
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..883
                     /gene="2010106E10Rik"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2"
                     /codon_start=1
                     /product="uncharacterized protein LOC67715 isoform 2
                     precursor"
                     /protein_id="NP_080609.2"
                     /db_xref="CCDS:CCDS30360.1"
                     /db_xref="GeneID:67715"
                     /db_xref="MGI:MGI:1914965"
                     /translation="MADCTFMLTQMLFISWFLMAHCSQPNCTSVKDFNNCLGNTTGFC
                     PESIVCACKDGKPFCKCPNFRGQWGDYWYMGEKCDQLWNTLDLVLVATLPGIALAIIV
                     GVAIQIIHYCKGKSKKNGNHHRVEKSMSELRPQHNSAYGLGTDRNLPQPNQRENPWSL
                     SNPEAFSRTSFSPSSQLSRTNSNFIAQEHKEDHPYNYPYLKWNASPGPSNPAVNYGNS
                     HLSATYAKPNFDFSTSGVPRAAYPPKEKKYSVYEESEITYKIGRANMIPNY"
     exon            147..252
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            253..444
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            445..538
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            539..621
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            622..760
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            761..1257
                     /gene="2010106E10Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctggctat cgaaactgca ggagacctaa gttcagttgt taacactgcc tagggttctg
       61 cttttctctc ataatggcag attgcacatt tatgctgact caaatgctgt tcatctcctg
      121 gtttttgatg gcacattgct cacaacccaa ctgtacatct gtgaaagact ttaacaattg
      181 tctaggaaac acaacaggtt tctgcccaga gtctattgtt tgtgcatgca aggatggcaa
      241 gcctttctgc aaatgtccaa atttcagagg ccaatgggga gactactggt acatggggga
      301 gaaatgtgat caactctgga acactctgga cctggtttta gtagcaacat tgcctggaat
      361 agcactggcc ataatcgttg gtgtggcaat ccagattatc cattactgta aagggaagtc
      421 aaagaagaat ggaaatcatc acagagtgga gaagagtatg tcagaacttc gacctcaaca
      481 taattctgca tatggtttgg gtactgatag gaatcttcct caacctaatc aaagagagaa
      541 tccatggagc ttatcaaacc cagaagcttt ttctagaact tctttttctc catcatcaca
      601 attatccaga acaaattcca actttattgc tcaagaacac aaagaagacc atccttacaa
      661 ctatccatat cttaagtgga atgcctctcc aggaccaagt aatcccgcag taaactatgg
      721 aaacagtcat ttgtcagcca catatgcaaa gccaaacttt gatttttcca catccggggt
      781 cccacgagca gcatatcctc caaaagaaaa gaaatactcg gtttatgaag agtcagaaat
      841 cacttacaaa attggtcgtg caaacatgat acccaactat taatataccc atggaaaaaa
      901 ataactgtgt gtaaatctac atacaccaat cttgttatat accaaggaaa cactacaaat
      961 atgatttcca tgctctacat actttgtttt tcttataatt atgataattg ttttctttat
     1021 gtcttgagtt ttttttttct ttgttggccc ctcctgatga ccataatgca aaactttcat
     1081 ttcttctatt caattccatt aattcaccag atgcagatat ttgttatctc caaaatttgg
     1141 cacaatacct gggtatttat tcatggaatt ctttagtatg ttcagtgaaa tgaaaagaag
     1201 atcagttgca aactgtttat aaaaaataaa taatgatgaa taaaggcact tactggc
//
