LOCUS       NM_175141               2680 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 1810030O07 gene (1810030O07Rik), mRNA.
ACCESSION   NM_175141 XM_908566
VERSION     NM_175141.6
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC137660.1 and BX511770.1.
            
            On Sep 1, 2015 this sequence version replaced NM_175141.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC137660.1, BC051146.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2408              BC137660.1         1-2408
            2409-2680           BX511770.1         125-396
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 7.5 cM"
     gene            1..2680
                     /gene="1810030O07Rik"
                     /note="RIKEN cDNA 1810030O07 gene"
                     /db_xref="GeneID:69155"
                     /db_xref="MGI:MGI:1916405"
     exon            1..314
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1061
                     /gene="1810030O07Rik"
                     /codon_start=1
                     /product="uncharacterized protein CXorf38 homolog"
                     /protein_id="NP_780350.1"
                     /db_xref="CCDS:CCDS30024.1"
                     /db_xref="GeneID:69155"
                     /db_xref="MGI:MGI:1916405"
                     /translation="MVVSELAARLNCAEYKNWVKAGHCLLLLRSCLQGFIDREVLSFH
                     RGLLAAVPGLGPHATCRGGSRCSPRARQFQPQCQVCAEWKHEILRHHINRNGDVHWGN
                     CKPGLWPKDPWEVAKAFMPRGLADKRGPEECDAVALLSLINSCDHFVVDRKKVTEVIK
                     CRNEIMHSSEMKVSSTWLRDFQIKIQNFLNEFKNIPEIVAVYSRIEQLLTSDWAVHIP
                     EEDERDGCEFEIGSYLSVSQIHEIEIELLKEKLQEMYLQAAEEEMLPEEISNQLDVVK
                     GFLGSNTDLRNGLTEDLQKLESLHLQHQKQTSKDAGRQTPERKA"
     exon            315..449
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            450..569
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            570..719
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            720..899
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            900..1062
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1063..2670
                     /gene="1810030O07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2641..2646
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1810030O07Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2670
                     /gene="1810030O07Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtctggacgt tttgggggtt gggctacgcc tgcgctgcgt gggagcatcc cagggtgctg
       61 cgcgtgctta ccgccggccc cgccttcagg agtaagacat ggtggtgtcg gagctggcag
      121 cccgcctcaa ttgcgccgag tacaaaaact gggtgaaagc aggacactgc ctgctgctgc
      181 tgcgcagctg cctgcaaggt ttcatagacc gtgaagtgct ctcctttcac cgtggactgc
      241 tggctgcagt ccctggcctt ggaccccatg ctacctgccg cggcggttcc cggtgcagcc
      301 cgcgcgctcg ccagtttcag cctcagtgtc aggtatgcgc agagtggaaa cacgagatct
      361 tgaggcatca catcaacaga aatggagacg tgcactgggg aaattgcaag ccaggcctct
      421 ggcccaaaga cccttgggag gtagccaagg ccttcatgcc ccgaggactg gcagacaaac
      481 gaggacctga ggaatgtgat gcagttgctc ttttaagtct catcaactcc tgtgatcact
      541 ttgtggttga ccggaagaag gtcacagagg tgataaagtg tcgaaatgag ataatgcact
      601 cttcagagat gaaagtttca tctacctggc ttcgagattt tcagatcaag atccaaaatt
      661 ttctgaacga attcaagaat atcccagaga ttgtagcagt atattccaga atagaacagc
      721 tgttgacatc tgactgggct gttcacattc ctgaggaaga tgaacgagat gggtgtgaat
      781 ttgaaatagg aagttacttg agtgtgagcc aaatccacga aattgaaata gaattgctga
      841 aggaaaaact gcaagaaatg tatcttcaag cagcagaaga agagatgttg ccagaagaga
      901 tctcaaatca actggatgtg gtgaaaggtt ttctgggaag caacacagat cttagaaacg
      961 gccttacaga agacttgcag aagctagaga gcctccatct acagcatcaa aaacaaactt
     1021 caaaggatgc cggtagacag acacctgaaa ggaaggcttg agggtctttg ccattagact
     1081 gcttcatgtc acctctggac gttactatgt tccccgaact acctagaaga aacgctccat
     1141 gccaaggctc ggcaaagatg aagtcactcc ctcacctggc cagctgcctg cccaacaggg
     1201 atcctccaga gagggggtag caatagaaac tggatttggc atgtatttca actttataac
     1261 ccaaatgaat acaaatgtgc tttcagcttg cttatttaat cttccaggtt gctgtttagt
     1321 tttcagtgtt atggtttctt tctcccttca tttgtgaaag tccttgagaa gacttcaagc
     1381 aaagcaagat tttgcattta ttttgccact ttgccatagg aaaaaaaatc aattcccttc
     1441 tagatctgaa gtacaaaaca tagaatgttg atgcactaac ccacaaagac ctggtttcta
     1501 actgtaggaa gtttgagatc ctaacctttc attttattct tgtctagtta ttttgtcctt
     1561 atcaattcaa cacacaccaa gtgtcaaacc tgtgccagac attgaaacga gtggtgaaat
     1621 ccagtcttac taccttcatc tgccactcgg acagttcaga ggttctgttc agagaactat
     1681 accagtaaca ttacagtgaa ttgaaacaga aaaggcaaga cccttgtata aagggctcga
     1741 agacagatgt gctgaataca gaggtagcgg cctgtcccac gtctcttcca cagaactgtg
     1801 cctgggtatg tccgaatgga tgttcacaag ttgaggacct actaaataag ttgtagaaca
     1861 tctgtactat gccacctgtc ttagtaaggg ttctattcct gcacaaacat cgtgaccaag
     1921 aagcaagttg gggaggaaag ggtttattca gcttacactt ccatactgct gttcatcacc
     1981 aaaggaagtc aggactgaac tcacacaggt caggaagcag gagctgatgc agaggccatt
     2041 gagagatctt ccttactggc ttgctttcca ctggcttgct cagcctgctc tcttatagaa
     2101 cccaagacta ccagcccaga gatggcacca cccacaatgg accctccacc cttgaccact
     2161 aattgagaaa atgccttaca gctggatctc gtggaggcat ttccccaact gaagctccct
     2221 tctcagtgat aactgcagct gtgtcaactg acacacaaat ccagccagtc caccacataa
     2281 ctattctaaa gaatgacccc ataatgaagt gcagtcatgg gaattacctg taaggcatct
     2341 aaaggaaaga aacggtttga agggtggact ggagctccgt ggtggggcgc ttgcctaccc
     2401 agcatgtgta ataccttgac tagatggctg ttccactgcc aaaagcaaat caatagaaaa
     2461 acaaagtatt gaataatgat gagcatgcta tagtgctgtt tgtgtgctat agtaactgag
     2521 ctctggaaag ggatggtctg ctttctaagc ctttcttcta tattatgtct ctaagaggaa
     2581 ttggggctgt gggagcagtc agaggaattt agcttttctg ctttgtatat tcttttttat
     2641 aataaacatg catctgtgta ttttgaaaaa aaaaaaaaaa
//
