LOCUS       NM_029685               1343 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 1700113H08 gene (1700113H08Rik), mRNA.
ACCESSION   NM_029685 XM_354556 XM_913255
VERSION     NM_029685.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC025501.19 and AC123074.2.
            
            On or before Sep 18, 2009 this sequence version replaced
            XM_913255.2, XM_354556.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments. The combination of the
            alternatively spliced exons is inferred based on available
            transcript data and further supported by similar exon-intron
            structure of the related human gene, GeneID 374470.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               AC025501.19        26881-26994         c
            115-208             AC123074.2         19853-19946
            209-277             AC123074.2         67303-67371
            278-389             AC123074.2         110916-111027
            390-749             AC123074.2         171770-172129
            750-1343            AC123074.2         175899-176492
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 43.5 cM"
     gene            1..1343
                     /gene="1700113H08Rik"
                     /note="RIKEN cDNA 1700113H08 gene"
                     /db_xref="GeneID:76640"
                     /db_xref="MGI:MGI:1923890"
     exon            1..114
                     /gene="1700113H08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            115..208
                     /gene="1700113H08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             203..1186
                     /gene="1700113H08Rik"
                     /codon_start=1
                     /product="uncharacterized protein C12orf42 homolog"
                     /protein_id="NP_083961.1"
                     /db_xref="CCDS:CCDS48660.1"
                     /db_xref="GeneID:76640"
                     /db_xref="MGI:MGI:1923890"
                     /translation="MQKSFCYIPIVSSVTLWERGSPNTSPIPRCKTTASPCSRFLTHM
                     ETFSSSHKTDKLHFLPFPGSIGTHSPMTGKRLLCVHQYTIPKSPASTISLDEEIGGEA
                     RPSLSSSSEMEEDDLLFTINEEQKPPRRLPNQTWISPFLEMQAASKLLKKSHSVNTIS
                     LEAAGRHIPLQNHPLVNSKGDSGPALRPFTAIGLCRSVSQNYSSQPISCKTSETVQED
                     KATASGSPTQTDSLTVCGSALGRGAVAITPETTLKHPHLPTERRPKAVISFPARVVKE
                     PLPLLVGSSTRLFSKKLMKACSSVAPRPPQDFHKACSQSLSKPVVNTHTNC"
     exon            209..277
                     /gene="1700113H08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            278..389
                     /gene="1700113H08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            390..749
                     /gene="1700113H08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            750..1343
                     /gene="1700113H08Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcagtgtgg ggccaactcg tttggaaggc agcggcgggc acaggatagg gcttctgcag
       61 ctgcaggtag acaggcagaa gacaagtcgt gggtcttgtc tggtcacaga ggaggagact
      121 aaaagtacag ataaatgcat aaagtgactc gtgtggagga atgggagaag ccttctaaat
      181 aattagactc ttgaaaaaca ggatgcagaa gtcgttttgc tatattccca ttgtgagcag
      241 tgtgaccctg tgggagagag gctcacctaa tacaagtcct atccctcgtt gtaaaaccac
      301 agcttcaccc tgctccagat tccttactca catggagaca ttttcctcat cacataaaac
      361 ggataaattg cattttctgc catttccagg atctatagga actcatagtc caatgacagg
      421 taaaagacta ctttgcgttc accagtacac aattcctaag tctcctgcga gcaccatttc
      481 cctcgatgaa gaaattggtg gagaagcccg tccttccctg tcatcatcca gtgaaatgga
      541 ggaagatgat ctgctcttta caattaatga agagcagaag ccgcctagac gactacccaa
      601 tcagacctgg atcagcccat ttctggaaat gcaagctgcc agtaagcttc ttaaaaaatc
      661 acactcagtg aataccattt ctctggaagc tgcaggtaga catatcccac ttcagaacca
      721 tcccttagtc aactccaagg gagattctgg tcctgcgctg agacctttta ccgccattgg
      781 cctctgcaga agtgtcagtc agaactactc ttcccagccg atcagctgta agacttctga
      841 aaccgtgcag gaggataaag ctacagcctc gggatctcca acacaaacag attccctaac
      901 cgtgtgcgga agtgcattag gaagaggcgc ggttgccata acaccagaga cgaccctcaa
      961 gcatcctcat ctccccactg aacggaggcc aaaggcagtt atctctttcc ccgcccgtgt
     1021 ggtcaaagag cccttgcctc tgctcgtggg ctcttctacc cgtttatttt ccaagaagtt
     1081 aatgaaggct tgctcctcag tggccccgcg cccaccccag gatttccata aggcttgttc
     1141 acagagtctt tcgaagcccg tggtgaatac tcacactaac tgctgagaag gaattgttct
     1201 gcgagctctg cccatcttcc aatcaatgcc tgcccagaac aacagaaagg gcctcagatg
     1261 tattggtttc cacagaacca ttgttacgct ttgtaaagca tttttgaacc taataaataa
     1321 tgtcaaaagt ctctatcgcc gcc
//
