LOCUS       NM_053216               1101 bp    mRNA    linear   ROD 08-AUG-2024
DEFINITION  Mus musculus RIKEN cDNA 1700102P08 gene (1700102P08Rik), mRNA.
ACCESSION   NM_053216 XM_489846
VERSION     NM_053216.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Lin,Z., Li,D., Zheng,J., Yao,C., Liu,D., Zhang,H., Feng,H.,
            Chen,C., Li,P., Zhang,Y., Jiang,B., Hu,Z., Zhao,Y., Shi,F., Cao,D.,
            Rodriguez-Wallberg,K.A., Li,Z., Yeung,W.S.B., Chow,L.T., Wang,H.
            and Liu,K.
  TITLE     The male pachynema-specific protein MAPS drives phase separation in
            vitro and regulates sex body formation and chromatin behaviors in
            vivo
  JOURNAL   Cell Rep 43 (1), 113651 (2024)
   PUBMED   38175751
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Li,M., Zheng,J., Li,G., Lin,Z., Li,D., Liu,D., Feng,H., Cao,D.,
            Ng,E.H.Y., Li,R.H.W., Han,C., Yeung,W.S.B., Chow,L.T., Wang,H. and
            Liu,K.
  TITLE     The male germline-specific protein MAPS is indispensable for
            pachynema progression and fertility
  JOURNAL   Proc Natl Acad Sci U S A 118 (8) (2021)
   PUBMED   33602822
REFERENCE   3  (bases 1 to 1101)
  AUTHORS   Wu,X.L., Yun,D.M., Gao,S., Liang,A.J., Duan,Z.Z., Wang,H.S.,
            Wang,G.S. and Sun,F.
  TITLE     The testis-specific gene 1700102P08Rik is essential for male
            fertility
  JOURNAL   Mol Reprod Dev 87 (2), 231-240 (2020)
   PUBMED   31930642
  REMARK    GeneRIF: The testis-specific gene 1700102P08Rik is essential for
            male fertility.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC161260.2.
            
            On Nov 10, 2022 this sequence version replaced NM_053216.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061048.1, AK007115.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                AC161260.2         77158-77183         c
            27-431              AC161260.2         76378-76782         c
            432-523             AC161260.2         74632-74723         c
            524-1101            AC161260.2         72247-72824         c
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 59.3 cM"
     gene            1..1101
                     /gene="1700102P08Rik"
                     /note="RIKEN cDNA 1700102P08 gene"
                     /db_xref="GeneID:112418"
                     /db_xref="MGI:MGI:2148248"
     exon            1..26
                     /gene="1700102P08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            27..431
                     /gene="1700102P08Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..789
                     /gene="1700102P08Rik"
                     /codon_start=1
                     /product="uncharacterized protein C3orf62 homolog"
                     /protein_id="NP_444446.2"
                     /db_xref="CCDS:CCDS23524.1"
                     /db_xref="GeneID:112418"
                     /db_xref="MGI:MGI:2148248"
                     /translation="MSEKLRRCRKELTAAIDRAFEGVRHSQECTAQQRLDAPSLTSQP
                     VHRLLCRNPLAACPSAAPYSGASCAPESENPAFGTHHIPVNSKLQQPLYPKRKPLTSK
                     ENVLMQSSILARDRQFWRAAGDGEDWRKDSLRKDMERDLKADPNVLLSSSSQEVTKDL
                     LDMIDHTSIRTIEELAGKLEFENELNRVCGHCQDSPFKEEAWALLVDESPQKALDADP
                     GSLKQALDDQNIVETVLDLEEDYNLMTSFKYQIE"
     exon            432..523
                     /gene="1700102P08Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            524..1101
                     /gene="1700102P08Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1077..1082
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700102P08Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1101
                     /gene="1700102P08Rik"
                     /note="major polyA site"
ORIGIN      
        1 gggcactctt gtgcggcaac ggctggggaa atgtctgaaa aactacgaag atgcagaaag
       61 gagctgactg ctgctataga ccgagccttt gaaggagtca ggcattctca ggagtgcaca
      121 gcccagcaga ggctggacgc cccgtcgctc acctcccagc cggtacacag gctcctctgc
      181 agaaacccac tggctgcctg cccctctgct gccccatact ctggtgcctc gtgtgctcct
      241 gagagtgaga acccggcctt cgggacacac catattccgg ttaattcaaa acttcagcag
      301 cctctatacc ccaaaaggaa acctctgacc agcaaggaaa atgtcttgat gcagtcttcc
      361 attttggcac gtgacagaca gttttggaga gctgcaggtg atggggaaga ctggagaaaa
      421 gatagtttaa ggaaggatat ggagagagat ttaaaagctg acccaaatgt actgctcagc
      481 agttctagcc aagaggtcac aaaggatctg ctagacatga ttgaccatac aagtatccga
      541 actattgaag aattggctgg aaaactagaa tttgaaaatg aattgaaccg tgtgtgtgga
      601 cactgccaag attcaccctt caaggaggaa gcctgggccc tgcttgtgga tgagagtcct
      661 cagaaggctc tggatgctga ccctggtagc ctcaagcagg ctttggatga tcagaatata
      721 gttgagactg ttctggactt ggaagaagac tacaacttga tgacttcttt taaataccaa
      781 atagagtgag gagagtggat gtcagcagcc acagtggtta ccagaacaag tcttcacgag
      841 gggttggcag agcccaaatt gccacacctt gtttaatttc tgctgaatcc cattttgagc
      901 tgagagccca ggttttagtt ctgttatttt gaaatgtttg aaaagttttt tttggacttg
      961 acattttttt taaagtgtat tcttggttag tgttgaatat atacagtccc caggataggt
     1021 tataggttgt gcctctgctc tttgtccttg tattctttta tatgaatccc tggaaaaata
     1081 aaaatccagg aaccataaaa a
//
