LOCUS       NM_001370913            1254 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus RIKEN cDNA 1700093K21 gene (1700093K21Rik), transcript
            variant 3, mRNA.
ACCESSION   NM_001370913
VERSION     NM_001370913.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Miyata,H., Castaneda,J.M., Fujihara,Y., Yu,Z., Archambeault,D.R.,
            Isotani,A., Kiyozumi,D., Kriseman,M.L., Mashiko,D., Matsumura,T.,
            Matzuk,R.M., Mori,M., Noda,T., Oji,A., Okabe,M.,
            Prunskaite-Hyyrylainen,R., Ramirez-Solis,R., Satouh,Y., Zhang,Q.,
            Ikawa,M. and Matzuk,M.M.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
REFERENCE   3  (bases 1 to 1254)
  AUTHORS   Li,Y., Klena,N.T., Gabriel,G.C., Liu,X., Kim,A.J., Lemke,K.,
            Chen,Y., Chatterjee,B., Devine,W., Damerla,R.R., Chang,C., Yagi,H.,
            San Agustin,J.T., Thahir,M., Anderton,S., Lawhead,C., Vescovi,A.,
            Pratt,H., Morgan,J., Haynes,L., Smith,C.L., Eppig,J.T.,
            Reinholdt,L., Francis,R., Leatherbury,L., Ganapathiraju,M.K.,
            Tobita,K., Pazour,G.J. and Lo,C.W.
  TITLE     Global genetic analysis in mice unveils central role for cilia in
            congenital heart disease
  JOURNAL   Nature 521 (7553), 520-524 (2015)
   PUBMED   25807483
REFERENCE   4  (bases 1 to 1254)
  AUTHORS   Kass,D.H., Janousek,V., Wang,L. and Tucker,P.K.
  TITLE     The uncharacterized gene 1700093K21Rik and flanking regions are
            correlated with reproductive isolation in the house mouse, Mus
            musculus
  JOURNAL   Mamm Genome 25 (5-6), 223-234 (2014)
   PUBMED   24549580
  REMARK    GeneRIF: The 1700093K21Rik gene and flanking regions are correlated
            with reproductive isolation in the house mouse.
REFERENCE   5  (bases 1 to 1254)
  AUTHORS   Hong,S., Choi,I., Woo,J.M., Oh,J., Kim,T., Choi,E., Kim,T.W.,
            Jung,Y.K., Kim,D.H., Sun,C.H., Yi,G.S., Eddy,E.M. and Cho,C.
  TITLE     Identification and integrative analysis of 28 novel genes
            specifically expressed and developmentally regulated in murine
            spermatogenic cells
  JOURNAL   J Biol Chem 280 (9), 7685-7693 (2005)
   PUBMED   15613475
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL672049.13.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.62058.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849384,
                                           SAMN01164131 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-147               AL672049.13        64025-64171         c
            148-379             AL672049.13        63528-63759         c
            380-575             AL672049.13        62811-63006         c
            576-677             AL672049.13        62071-62172         c
            678-846             AL672049.13        61242-61410         c
            847-1254            AL672049.13        60233-60640         c
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 14.32 cM"
     gene            1..1254
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /note="RIKEN cDNA 1700093K21 gene"
                     /db_xref="GeneID:67358"
                     /db_xref="MGI:MGI:1914608"
     exon            1..147
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /inference="alignment:Splign:2.1.0"
     exon            148..379
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /inference="alignment:Splign:2.1.0"
     exon            380..575
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /inference="alignment:Splign:2.1.0"
     CDS             481..1017
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /codon_start=1
                     /product="uncharacterized protein C2orf74 homolog"
                     /protein_id="NP_001357842.1"
                     /db_xref="GeneID:67358"
                     /db_xref="MGI:MGI:1914608"
                     /translation="MAFETTAITFFFILLICFICILLLLAIFLYKCYRGHNHEEPLKT
                     LCTGEGCVAANAEMDKPEDQDKVLMHFLNMGLPMKPSILVQKQSKEEMATSLGDNIKA
                     EDYQKKQTYEPVNARETNHEGELAEKMPIHVHRSSDTGSQKRPLKGVTFSKEVIVVDL
                     GNEYPTPRSYAREHKERK"
     exon            576..677
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /inference="alignment:Splign:2.1.0"
     exon            678..846
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /inference="alignment:Splign:2.1.0"
     exon            847..1254
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1190..1195
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /note="hexamer: AATATA"
     polyA_site      1211
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /note="major polyA site"
     regulatory      1235..1240
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
                     /note="hexamer: AATAAA"
     polyA_site      1254
                     /gene="1700093K21Rik"
                     /gene_synonym="b2b3025Clo"
ORIGIN      
        1 gtcgtctgtc acaggatgtg gagcacacag catggagcac tccttcctta gggaagacgt
       61 tgcaaggcag tgactggcag aaaggggccc atcccatccc atcactaacc tgtagactcc
      121 ttgatctcaa gcttctccct tccagaggaa aatgcagcgc tgccctttct gccatgggtt
      181 taccccctac ctacctggtt aggtcaggcc tgcctttatc ttctgactta tcatcttgtt
      241 ctactcctgc ttcctggagc tgtggccttc acagcacctg gttgtgactc taggaagcca
      301 gcacggtgag atggaataaa gagcgtaggc cactcctcct ggagagaagc ccttagatac
      361 cctcatccag ctgatcgaga aaacataaag aacaagaaat ctgcattcaa actaggctga
      421 acaaaaatgt ttacgcaaag tgacactggg aaaatagagg agattttcac aacgaacacc
      481 atggccttcg agaccacagc gatcacattc ttcttcatcc tgctcatctg cttcatttgt
      541 atcctcctct tactggcaat ttttctatat aaatgttaca gaggtcacaa ccatgaagag
      601 ccactgaaga ccctctgtac aggcgaaggc tgcgtagctg ctaatgcaga gatggacaaa
      661 cccgaagatc aagacaaggt cctaatgcac tttttaaaca tgggcttgcc gatgaagcct
      721 agcattcttg tgcaaaagca gagtaaggaa gagatggcca catccttagg agacaacatc
      781 aaggcagaag actaccaaaa gaaacagaca tatgagcctg tgaatgctag agaaaccaac
      841 catgagggtg agcttgctga gaaaatgccc atacatgtcc acagatcttc agatacagga
      901 agccaaaaaa gacctttaaa aggagtgaca ttttctaagg aggtgattgt tgtggacctt
      961 ggaaacgaat accctacacc tcgaagctat gctcgagaac ataaggagag gaaatgaagt
     1021 gtagaaaaag ctgtgcggaa agtgtaacct ttgaccagct tggatcgact gagggtactg
     1081 ggtcgtgtca aggcggcagg aggatgggaa gtgaacaaat acagacagga ttctaccttc
     1141 gtggaagaag agaactgtgc aaaattctgt acgtaaaata ctgagctcga atatagtttt
     1201 taacaaacaa atctgagttt ggtaagttga ctataataaa tatccttaaa tgtc
//
