LOCUS       NM_028484               1099 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1700037C18 gene (1700037C18Rik), mRNA.
ACCESSION   NM_028484 XM_484521
VERSION     NM_028484.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK161085.1, AK012792.1 and CR517846.1.
            
            On Apr 26, 2007 this sequence version replaced NM_028484.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK161085.1, AK012792.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-41                AK161085.1         4-44
            42-670              AK012792.1         13-641
            671-826             AK161085.1         678-833
            827-1099            CR517846.1         1-273               c
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 2.29 cM"
     gene            1..1099
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /note="RIKEN cDNA 1700037C18 gene"
                     /db_xref="GeneID:73261"
                     /db_xref="MGI:MGI:1920511"
     exon            1..240
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             237..752
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /codon_start=1
                     /product="uncharacterized protein C16orf90 homolog"
                     /protein_id="NP_082760.2"
                     /db_xref="CCDS:CCDS49746.1"
                     /db_xref="GeneID:73261"
                     /db_xref="MGI:MGI:1920511"
                     /translation="MDAVSWAPGRPSHPDTPPNIYEGGLGAQQQQGPSAQGSKPKNFR
                     LRHLRSLALYLPGHMQPAGQCGSHWLGRLMAGGSLTRPEGSPWPLDLPQGTLGPGNSH
                     CSALLEAHLPRDSLGNTASSSSMDPAKGVPSQSGPPEGLGLRPKRSWRALEETMCPLC
                     KRTRSGALERT"
     exon            241..594
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            595..1097
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1078..1083
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      1097
                     /gene="1700037C18Rik"
                     /gene_synonym="2810022L20Rik"
                     /note="major polyA site"
ORIGIN      
        1 gcacagctag tcagtattcc cgacaagccg gaaattggcg cccagactcg cgcgccagag
       61 gttgccctgg aaactgtgga gcgaggtagt gctggtgtac cacgcctagg gtgtcagggt
      121 cagcacaggc tctacagaga actctccttg gtgactgcta cgagtcgagg acaaccgcga
      181 caaaagcagg gctggagaga ggagagctgt gccaggaagg gtgggcgata aggaaaatgg
      241 atgcagtgag ctgggcccca ggacgcccca gccaccctga cacaccaccc aacatctatg
      301 agggaggatt gggggcccag cagcagcagg gccccagtgc tcagggaagc aagcccaaga
      361 acttccgact gcgacacctc cggagcctgg ctctctacct gccaggccac atgcagcctg
      421 ctggccaatg tggaagccac tggctaggcc ggctcatggc tgggggcagc ctgacacggc
      481 ctgaaggctc accctggccc ctggacctgc cacaggggac cctgggtcca ggtaacagcc
      541 attgctcagc ccttctggaa gcccacttgc ccagggacag cctgggaaat acagcttcca
      601 gttccagcat ggacccagcc aagggtgtcc cctcccagtc tggtcccccc gagggcttgg
      661 gactcaggcc caagaggtcc tggagagcct tggaggagac catgtgtccc ttgtgcaaga
      721 gaacccgctc tggggccttg gagaggacat aggagccaaa gtgccagggc tggggaacaa
      781 gaggggaagg atggccgagg aggaggaggc cagtgttact gaggaagggt tcgtcccagc
      841 ggcagtcctc cccattgaga tggcccccag agttgcccag caggagacct gggctagtct
      901 ggggaaagca tgagggaggg agggaggaag gaagaagaac catgagaggg acagaagaaa
      961 tggaatgccc atgcccttgc agcctgccca aactccggtc agccacttgt acctgggagg
     1021 tcaggccgag cagagaatcg ggttcctgag aggccaggag tcctcaggtc taatctcagt
     1081 aaaagccaag gcctgcaaa
//
