LOCUS       NM_028509               2054 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1700034J05 gene (1700034J05Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_028509
VERSION     NM_028509.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2054)
  AUTHORS   Miyata,H., Castaneda,J.M., Fujihara,Y., Yu,Z., Archambeault,D.R.,
            Isotani,A., Kiyozumi,D., Kriseman,M.L., Mashiko,D., Matsumura,T.,
            Matzuk,R.M., Mori,M., Noda,T., Oji,A., Okabe,M.,
            Prunskaite-Hyyrylainen,R., Ramirez-Solis,R., Satouh,Y., Zhang,Q.,
            Ikawa,M. and Matzuk,M.M.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB573720.1 and BC052362.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052362.1, AK029686.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-8                 BB573720.1         2-9
            9-2054              BC052362.1         1-2046
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 77.7 cM"
     gene            1..2054
                     /gene="1700034J05Rik"
                     /note="RIKEN cDNA 1700034J05 gene"
                     /db_xref="GeneID:73344"
                     /db_xref="MGI:MGI:1920594"
     exon            1..133
                     /gene="1700034J05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            134..834
                     /gene="1700034J05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..1083
                     /gene="1700034J05Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     uncharacterized protein C12orf71 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C12orf71 homolog isoform
                     1"
                     /protein_id="NP_082785.1"
                     /db_xref="CCDS:CCDS51957.1"
                     /db_xref="GeneID:73344"
                     /db_xref="MGI:MGI:1920594"
                     /translation="MTTSPSSSDYSSTEDSIYECKSNQSASVGYYPSENTFSYEDLVS
                     REETASVDSLVHFLPPVQSTWRTESLRRLFRKRDQVEHDPEQFSKLSITLAWDIDVDS
                     NHADSLANLDLNAHSQWMDKWPEDKTKLTPCKLYNLVQKLETFLGKEKGGQHDGCVLP
                     ESTQKEDVHLNSTTPPHTAQVSPKERDVCQDLSKQRSLENEDICQVLEDPPRLLKDEV
                     VQEIRQASESSLETSSVSSPQPEGASRSHNIFCMNFRWVFQWLRTQIFSRWRRQRPSQ
                     ATNTWHQKAVRNIHSLRSNRIQPQE"
     exon            835..2034
                     /gene="1700034J05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2007..2012
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700034J05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2029
                     /gene="1700034J05Rik"
                     /note="major polyA site"
ORIGIN      
        1 aacttctcag aagcagttgg gctttacatc actgagacat gggctctgaa gggtttctga
       61 ctccatcact ttgtctccac tgctggaagc gcctgtctca tctgggcagc cctcagatca
      121 gggcatgaca aagtttccag aatcaaggaa aacttgagat tggacactct cagcaccatg
      181 acaacctcac cctccagcag tgactacagt agcacagagg attctattta tgaatgcaag
      241 tccaaccaga gcgcctcggt gggctactac ccctctgaga acaccttttc ctatgaggac
      301 ctggtctccc gtgaggagac agcctctgtg gattctttgg tccatttcct ccctcctgtc
      361 caaagcacct ggaggacaga gagtttaagg agactcttca ggaaacgaga tcaggtggag
      421 catgacccag agcagttcag caagctaagc atcacactgg cctgggatat cgatgtggac
      481 tctaaccatg cagactctct tgctaatctg gatctaaatg cccatagcca gtggatggat
      541 aagtggccag aagacaagac aaaactgact ccctgcaaac tgtataacct agtacagaaa
      601 cttgagacat ttctaggaaa agaaaaaggt ggccagcatg acggctgtgt gctccctgaa
      661 tctactcaga aggaagatgt ccacctcaac agcactaccc ctccacatac tgctcaggtc
      721 agtcctaaag aacgtgatgt ttgtcaagac ttgtccaagc aaagatccct ggaaaatgaa
      781 gatatctgtc aggtgctaga ggatcctcca aggttactga aagacgaagt tgtgcaggag
      841 ataagacagg catctgagag ctccttggaa acctcctccg tgtcatcccc tcagccagag
      901 ggtgcttccc gctcacacaa catattctgt atgaactttc ggtgggtctt ccaatggctg
      961 cggacacaaa tcttctcccg atggaggaga cagcgcccta gccaggctac caacacctgg
     1021 caccagaaag cagtgagaaa tatacattct ctcagaagca acagaatcca accccaagaa
     1081 tgacacagga atgagttcac ctgacagccc cagagtttta aacctttgaa gcctcttgtt
     1141 caaaaattcc taagaggtat gtgtcctctc ttccacctca cagctgagga aatcaatacc
     1201 tggagtacac agtgggagtt tccaatcttc acattccttc tgaacaagcc acttattaca
     1261 accagggaac aagtgtacct gaagtagtct ggtatcctgg accaccagaa ctgctgtctt
     1321 gatgttggac cctcgactaa ggagtggctc caaacagtct cagtgcccac tggaagcaca
     1381 acctaagcca ccccaccatg gcgggaggct ggtgggatat atactgcctt ctggaaatga
     1441 gggtttgcat aatgaaagag taaaacacac ataaacaaaa tggaggcaaa aagaaggagg
     1501 gagaggggat gctattcttt taggaagcag catactacct aagtttacca agagttaatt
     1561 cagccttctg aattcaacaa gcatattttc agcctgagtc aaagtaattt gcttggagaa
     1621 gacacacata agagagatct gtgtttactg gggaaaaaga cgtggggatt gttgagcagg
     1681 ggttcccatc tcccccaaga ctatactgaa gaaaaagccc aattctttag taagatttct
     1741 ggtttctgcc tactcctttt aacctctgga atgcggcaat aggaagtatt caagcatagc
     1801 tcgttcattc tagtgtccaa tgcattatcc aaccaaagca ggtcctctaa gcctcacatg
     1861 tggggaaggg gtgaggctag tgagtaccaa aagggatgcg tgggagctgg agggccactg
     1921 gggtgttggg ggtaagaatt ttactgaacc tttaagtctc ctgtagaatt actataattg
     1981 tcaggcacat attaatctca ttaatcaata aattctggga tctatttaac ctcaaaaaaa
     2041 aaaaaaaaaa aaaa
//
