LOCUS       NM_025492                931 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1700020L24 gene (1700020L24Rik), mRNA.
ACCESSION   NM_025492
VERSION     NM_025492.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Carninci,P., Kasukawa,T., Katayama,S., Gough,J., Frith,M.C.,
            Maeda,N., Oyama,R., Ravasi,T., Lenhard,B., Wells,C., Kodzius,R.,
            Shimokawa,K., Bajic,V.B., Brenner,S.E., Batalov,S., Forrest,A.R.,
            Zavolan,M., Davis,M.J., Wilming,L.G., Aidinis,V., Allen,J.E.,
            Ambesi-Impiombato,A., Apweiler,R., Aturaliya,R.N., Bailey,T.L.,
            Bansal,M., Baxter,L., Beisel,K.W., Bersano,T., Bono,H., Chalk,A.M.,
            Chiu,K.P., Choudhary,V., Christoffels,A., Clutterbuck,D.R.,
            Crowe,M.L., Dalla,E., Dalrymple,B.P., de Bono,B., Della Gatta,G.,
            di Bernardo,D., Down,T., Engstrom,P., Fagiolini,M., Faulkner,G.,
            Fletcher,C.F., Fukushima,T., Furuno,M., Futaki,S., Gariboldi,M.,
            Georgii-Hemming,P., Gingeras,T.R., Gojobori,T., Green,R.E.,
            Gustincich,S., Harbers,M., Hayashi,Y., Hensch,T.K., Hirokawa,N.,
            Hill,D., Huminiecki,L., Iacono,M., Ikeo,K., Iwama,A., Ishikawa,T.,
            Jakt,M., Kanapin,A., Katoh,M., Kawasawa,Y., Kelso,J., Kitamura,H.,
            Kitano,H., Kollias,G., Krishnan,S.P., Kruger,A., Kummerfeld,S.K.,
            Kurochkin,I.V., Lareau,L.F., Lazarevic,D., Lipovich,L., Liu,J.,
            Liuni,S., McWilliam,S., Madan Babu,M., Madera,M., Marchionni,L.,
            Matsuda,H., Matsuzawa,S., Miki,H., Mignone,F., Miyake,S.,
            Morris,K., Mottagui-Tabar,S., Mulder,N., Nakano,N., Nakauchi,H.,
            Ng,P., Nilsson,R., Nishiguchi,S., Nishikawa,S., Nori,F., Ohara,O.,
            Okazaki,Y., Orlando,V., Pang,K.C., Pavan,W.J., Pavesi,G.,
            Pesole,G., Petrovsky,N., Piazza,S., Reed,J., Reid,J.F., Ring,B.Z.,
            Ringwald,M., Rost,B., Ruan,Y., Salzberg,S.L., Sandelin,A.,
            Schneider,C., Schonbach,C., Sekiguchi,K., Semple,C.A., Seno,S.,
            Sessa,L., Sheng,Y., Shibata,Y., Shimada,H., Shimada,K., Silva,D.,
            Sinclair,B., Sperling,S., Stupka,E., Sugiura,K., Sultana,R.,
            Takenaka,Y., Taki,K., Tammoja,K., Tan,S.L., Tang,S., Taylor,M.S.,
            Tegner,J., Teichmann,S.A., Ueda,H.R., van Nimwegen,E., Verardo,R.,
            Wei,C.L., Yagi,K., Yamanishi,H., Zabarovsky,E., Zhu,S., Zimmer,A.,
            Hide,W., Bult,C., Grimmond,S.M., Teasdale,R.D., Liu,E.T.,
            Brusic,V., Quackenbush,J., Wahlestedt,C., Mattick,J.S., Hume,D.A.,
            Kai,C., Sasaki,D., Tomaru,Y., Fukuda,S., Kanamori-Katayama,M.,
            Suzuki,M., Aoki,J., Arakawa,T., Iida,J., Imamura,K., Itoh,M.,
            Kato,T., Kawaji,H., Kawagashira,N., Kawashima,T., Kojima,M.,
            Kondo,S., Konno,H., Nakano,K., Ninomiya,N., Nishio,T., Okada,M.,
            Plessy,C., Shibata,K., Shiraki,T., Suzuki,S., Tagami,M., Waki,K.,
            Watahiki,A., Okamura-Oho,Y., Suzuki,H., Kawai,J. and Hayashizaki,Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
REFERENCE   2  (bases 1 to 931)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK006174.1 and BC152320.1.
            
            On Oct 31, 2007 this sequence version replaced NM_025492.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006174.1, AK005809.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-13                AK006174.1         2-14
            14-883              BC152320.1         1-870
            884-931             AK006174.1         885-932
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 50.38 cM"
     gene            1..931
                     /gene="1700020L24Rik"
                     /note="RIKEN cDNA 1700020L24 gene"
                     /db_xref="GeneID:66330"
                     /db_xref="MGI:MGI:1913580"
     exon            1..64
                     /gene="1700020L24Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..621
                     /gene="1700020L24Rik"
                     /codon_start=1
                     /product="uncharacterized protein C17orf50 homolog"
                     /protein_id="NP_079768.2"
                     /db_xref="CCDS:CCDS25165.1"
                     /db_xref="GeneID:66330"
                     /db_xref="MGI:MGI:1913580"
                     /translation="MDKHGVKTPLWRKEVEDPEAREEDLEDDSSSSSSSSSVEERSDP
                     ESATETEEDSRDAEEREARSVSYSPLRQESSSQQVALLRRSDSSFWGWLSPFALLGGL
                     AAPADRKRGAPEEPCVLETRRRPPRRGGCARCEILFCKKCKTLHSHPAYVEHCILEHP
                     DLGKAEATGNSELIDSQPPSPQCSKLFYL"
     exon            65..374
                     /gene="1700020L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            375..931
                     /gene="1700020L24Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      916..921
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700020L24Rik"
                     /note="putative"
     polyA_site      931
                     /gene="1700020L24Rik"
                     /note="putative"
ORIGIN      
        1 ctacatccca gtccctgacc agagggaaca ggcagtacag cattgggaag aatggataaa
       61 catggcgtga agactccttt gtggaggaag gaggtggagg atcccgaggc cagggaggag
      121 gatctggagg acgattcatc gtcgtcctcg tcttcgtcgt cggtggaaga gaggtcagac
      181 cccgagagcg cgaccgagac ggaggaggac tcccgagacg cggaagagcg cgaggcccgc
      241 tctgtgtcct acagtccgct gcgccaggag tccagcagcc agcaggtggc gctgctgcga
      301 cgctcagaca gcagcttctg gggttggctt agcccgttcg ctctgctggg tggcctggcg
      361 gccccggcag acaggaagcg gggtgccccg gaggaaccgt gcgtgttgga gacgcggcgg
      421 cggccaccgc gccggggtgg ctgtgcgcgc tgtgagattc ttttctgcaa gaaatgcaag
      481 actctgcaca gccacccggc ctacgtggag cactgtattc ttgagcaccc tgacctgggt
      541 aaggcagagg ccaccggcaa ctctgagctc attgactccc agcctccgag cccgcaatgc
      601 tccaaactct tctatctcta gtgagttcca cagaactgtc ccttcaagcc gccatcctta
      661 gcgcctccta ccggtgagaa ggcccaccgt cggttcacgg ttccatctgt tgtcttgcgg
      721 aactatagaa gaaactaggc actcctcccc agacagtacc cagcacctac agccctcctg
      781 accctcacgc cttcaacaca accttgcctg catcgttttc aggtcctctg gcctctctcc
      841 ggcttaccct ggagaaagat agcctcgggg tgtccttagc cctcttaata aattgcctct
      901 ttccttctaa tcagcaataa agtctccaat c
//
