LOCUS       NM_027070                627 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 1700019A02 gene (1700019A02Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_027070 XM_892538 XM_906756
VERSION     NM_027070.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Hong S, Choi I, Woo JM, Oh J, Kim T, Choi E, Kim TW, Jung YK, Kim
            DH, Sun CH, Yi GS, Eddy EM and Cho C.
  TITLE     Identification and integrative analysis of 28 novel genes
            specifically expressed and developmentally regulated in murine
            spermatogenic cells
  JOURNAL   J Biol Chem 280 (9), 7685-7693 (2005)
   PUBMED   15613475
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC129288.3.
            
            On Jan 26, 2019 this sequence version replaced NM_027070.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006101.1, BU945884.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-64                AC129288.3         65841-65904
            65-140              AC129288.3         68168-68243
            141-190             AC129288.3         70914-70963
            191-243             AC129288.3         71563-71615
            244-301             AC129288.3         75631-75688
            302-372             AC129288.3         83000-83070
            373-395             AC129288.3         83198-83220
            396-415             AC129288.3         90213-90232
            416-627             AC129288.3         94670-94881
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 26.99 cM"
     gene            1..627
                     /gene="1700019A02Rik"
                     /note="RIKEN cDNA 1700019A02 gene"
                     /db_xref="GeneID:69397"
                     /db_xref="MGI:MGI:1916647"
     exon            1..64
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             17..457
                     /gene="1700019A02Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC69397 isoform 1"
                     /protein_id="NP_081346.1"
                     /db_xref="CCDS:CCDS48258.1"
                     /db_xref="GeneID:69397"
                     /db_xref="MGI:MGI:1916647"
                     /translation="MAGAGSNGETLATRMEIIEMNDKLRNRQEIVNGLNIFLEENEEE
                     AYLEELEEESDMFEEEETEALNEDGSKEAHNNVRTSHKVSLRSIASMTDEERFNMRIK
                     KFGITSKEFRKSPVASCFGLPLSTGKENADMEKKRRRLERFGLS"
     exon            65..140
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            141..190
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            191..243
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            244..301
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            302..372
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            373..395
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            396..415
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            416..627
                     /gene="1700019A02Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acgcgccctg cacaatatgg ctggagcagg cagcaacgga gagaccttgg ctacccggat
       61 ggagatcata gagatgaatg acaagttaag aaacaggcaa gaaattgtga atggactgaa
      121 catatttttg gaagaaaatg aagaagaagc ctatttagaa gaactggaag aagaatccga
      181 catgtttgag gaggaagaaa ctgaagctct gaatgaagat ggttccaaag aagcacacaa
      241 taatgtaaga acatctcata aagtatccct caggagtatt gcatcaatga cagatgaaga
      301 gagatttaat atgagaatta agaagtttgg tattacaagt aaagaattca gaaaatcacc
      361 agtggcttct tgctttggac tgcctctgtc aactggcaaa gaaaatgctg atatggaaaa
      421 gaagagaagg cgcctggaac gttttggact ctcatgattc acttctgcat cttctctcca
      481 ggtttgctat gtaaagagaa gatcccagtt ccacatatca tctcattatc atcagttctt
      541 taatttttcc actgacattg gtttatactg ataatgtcac tgctgtaatt tataaataaa
      601 aacagacatt catatctact atatact
//
