LOCUS       NM_001081246            1690 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 1700017N19 gene (1700017N19Rik), mRNA.
ACCESSION   NM_001081246 XM_487140
VERSION     NM_001081246.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC153501.2.
            
            [WARNING] On Apr 23, 2024 this sequence was replaced by
            NM_001081246.2.
            
            On Feb 6, 2007 this sequence version replaced XM_487140.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK006074.1, AK014917.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-44                AC153501.2         192387-192430
            45-164              AC153501.2         194538-194657
            165-285             AC153501.2         195036-195156
            286-444             AC153501.2         201865-202023
            445-522             AC153501.2         203344-203421
            523-636             AC153501.2         203502-203615
            637-747             AC153501.2         205616-205726
            748-852             AC153501.2         209151-209255
            853-972             AC153501.2         210597-210716
            973-1077            AC153501.2         212430-212534
            1078-1281           AC153501.2         212751-212954
            1282-1374           AC153501.2         215199-215291
            1375-1690           AC153501.2         218077-218392
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 51.51 cM"
     gene            1..1690
                     /gene="1700017N19Rik"
                     /note="RIKEN cDNA 1700017N19 gene"
                     /db_xref="GeneID:66605"
                     /db_xref="MGI:MGI:1913855"
     exon            1..44
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            45..164
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             153..1400
                     /gene="1700017N19Rik"
                     /codon_start=1
                     /product="uncharacterized protein C12orf50 homolog"
                     /protein_id="NP_001074715.1"
                     /db_xref="CCDS:CCDS36047.1"
                     /db_xref="GeneID:66605"
                     /db_xref="MGI:MGI:1913855"
                     /translation="MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSS
                     NTTLQKESQEGSPSPTQSQESLKPMENVSRPIHHPLVLKTNFEEEEEEEEEPNDASSL
                     WTKTPEEIEEKRAIKEMCYKSGEYYRFHAPPDIPSSKSVAPTVEKELEKPLETGSELQ
                     EGDGLTVPTKFSLFERAGEAKTSLDRKPRTDIAAFENGGGDCYAPQRIIFLGVDESEA
                     LAEDKEATSKCSNVKEESKNGLHPKHPLTTRLMPTTHVLNATENISMKCRETPSSMND
                     VQPVRKPHFKGVKKRKWIYDEPKNFPGSGMRRAVHIPNPKHKMSYHHHNKNRNAENAS
                     YTHAPRDAVRTVTLNAPPRSRPTSRSYNKADVNKEPKLNLCPDKHMSTSYNGSAWRRR
                     IPFSKTYSKTEKVYPEPRRNGSK"
     exon            165..285
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            286..444
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            445..522
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            523..636
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            637..747
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            748..852
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            853..972
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1077
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1281
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1374
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1690
                     /gene="1700017N19Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gattactagt aaccactttc aacatttctg caaagctaga gaagggttcc cagtgccgat
       61 tccgacactg tgaagaagcc cttggcagtg acactgtgtg ctcattatgg agagagagaa
      121 aatgtttaga cccactttgc agatttagac acatggaaat gcagcaaaac tgcagcattt
      181 catgcttctg ggaaacccaa cctctgggtt gtgtgaagat cagttgtatc ttttaccaca
      241 gcaaaccccg aaatatcaat ggattgtttt tgccaccaag tagcaatacc accttacaga
      301 aagaaagtca ggaaggaagc ccatccccaa cccagagtca ggaatctctg aaacccatgg
      361 agaacgtatc aagacccatt catcatccat tagttttaaa aactaacttt gaagaagagg
      421 aggaggagga agaggaacca aatgatgctt ctagtttatg gacaaagacc cctgaagaaa
      481 ttgaagagaa aagagcaata aaggagatgt gttataaatc tggtgaatac tatagattcc
      541 acgctcctcc agacatccca tcatcaaaaa gcgtagctcc gacagtggag aaagagttag
      601 aaaagccttt ggaaactggc agtgaattac aagaaggaga tggtcttaca gttccaacaa
      661 agtttagcct atttgaaagg gcaggagagg caaaaacatc attggatagg aaaccaagga
      721 ctgacattgc tgcttttgaa aatggaggag gtgactgcta tgctccacag aggatcatat
      781 ttcttggagt ggatgaaagt gaagcattag ctgaagacaa agaagccacc tcaaaatgct
      841 caaatgtcaa agaagaaagc aagaatggtc ttcacccgaa gcatcctcta actactcgcc
      901 tcatgcctac aacacatgtg ttaaatgcca ctgagaatat cagcatgaag tgcagagaga
      961 ccccctcttc aatgaatgat gtccagccag tgaggaagcc tcattttaaa ggtgtgaaga
     1021 aaagaaaatg gatttatgat gaaccaaaga actttcctgg ctctggaatg cggagagcag
     1081 tgcacatccc aaatcccaaa cataaaatga gttaccatca tcataataaa aaccggaatg
     1141 ccgagaacgc ctcctatacg catgctccaa gagatgcagt aagaactgtc acactgaacg
     1201 cccctccccg aagccggccc acgagccggt cctacaacaa agctgatgtc aacaaggaac
     1261 ccaaactcaa cctctgtcca gataaacata tgtcaacatc gtataatggt tcagcctggc
     1321 gaagaagaat tcctttttca aaaacttatt caaagacgga aaaggtatat ccagagccaa
     1381 gaagaaatgg gagtaagtaa gcctggaggt tgagagaaga ggaaaatgag gaaagagaga
     1441 agctccagcc atcatctgat tcacaatcaa aaatgaaaat tcaaagaatg agatattcaa
     1501 gtactgcata gtatatagtg ggtagccaac gctgataaaa cgcaaattct gaaaataaga
     1561 cgcaggaaga acattgtgct ctttcaaaac tgataaaatg caaattgcaa acagctgcct
     1621 gtttatttat gtatgtctgg gattcattca atacattacc acaaaacatt taataaaatt
     1681 tcaaagtttg
//
