LOCUS       NM_028820               4934 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 1700017B05 gene (1700017B05Rik), mRNA.
ACCESSION   NM_028820 XM_134943 XM_976436
VERSION     NM_028820.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4934)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK031730.1, BY706170.1 and BC118527.1.
            
            On Nov 13, 2008 this sequence version replaced NM_028820.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC118527.1, AK029230.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               AK031730.1         2-110
            110-146             BY706170.1         59-95
            147-4934            BC118527.1         1-4788
FEATURES             Location/Qualifiers
     source          1..4934
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 30.89 cM"
     gene            1..4934
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /note="RIKEN cDNA 1700017B05 gene"
                     /db_xref="GeneID:74211"
                     /db_xref="MGI:MGI:1921461"
     exon            1..171
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /inference="alignment:Splign:2.1.0"
     exon            172..2926
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /inference="alignment:Splign:2.1.0"
     CDS             223..3294
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /codon_start=1
                     /product="uncharacterized protein C15orf39 homolog"
                     /protein_id="NP_083096.1"
                     /db_xref="CCDS:CCDS23219.1"
                     /db_xref="GeneID:74211"
                     /db_xref="MGI:MGI:1921461"
                     /translation="MAEKRPLGPLGPMMYGKLPRLEPDPGPGHSLPLSASSQDSCNYK
                     GAYFSCPIGGTSKAGSERLASWTPYPSLYPTGVAGSPLRGDNLLTNCLLYRPPTEGSE
                     KIQDSSELLPFGPQAHAYPGPPLAAPKPVYRNPLCYGLSTCLGDGGTKRSLDGDWTLV
                     TGPLLPSADPPCPLATAPGKGQPLDGTFLRGLPSGGPGKDSSLPFSPCQAFLEKYRTI
                     QSTGFLASKYTSPYPGDAKQAMSEGPSSPWTQLAQPLGPPCQDAVAAHYPLPPPPQAL
                     PCPPSCHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYLRQQAPQAPYMPPLGIDS
                     YSYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLGFPYARDDLSLYGASPGLGGTPPS
                     HSQNSVQPVPQPGAFQRACQPLPASQPCSEPVRPAEKPTPEAQEKMWLPSCRKEQLQP
                     RPNERPGVPIVIRDSPVPRTSPALHPCAKERQSVPQKDARPPSSPPMPVIDNVFSLAP
                     YRDYLDVQTPEPRAERDSAPATSKSQDKDCKGNLPAQDGASRSHCSLREEVALDLSVK
                     KTMAEGVPVKVPSPEVHEKPAEAVDGPGIENTVSGLPGLKKMVTEIPEVTAEATPRTN
                     FHSSVAFMFRKFKILRTAPVPAAIVSSPTTPAPVPAPAPAQPVPNPPSVPVGLQILTQ
                     PLPVACFNLALPSPPAIVASPAPASAPPPSPAPAPAPASGPAPSSAQVPTAAPVDSPE
                     QHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAAWQDCQGVQGLLGKLLSQL
                     QKFVCTQRCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDHRVELRPTTLSE
                     ERALRERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGGFDTEARTLSPS
                     EPTVTRDEPESQALAGKLPAPKVKKPGRKPPTPGPEKAEAATGEGSRNPSPSSGASTS
                     PPGPTLRARFRNLLENAWLNGVALPTWGHKASGADRSSPHPQLLGSQTHHL"
     exon            2927..4934
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4114..4119
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /note="hexamer: ATTAAA"
     polyA_site      4139
                     /gene="1700017B05Rik"
                     /gene_synonym="D9Ertd278e"
                     /note="major polyA site"
ORIGIN      
        1 aaacggcgcc cagcggcagc acgaacggtc gcgcggaacg tctctctggg ctagctgcct
       61 gccgcgactt cccgcgcaag gccggcggga cagggacccg cagcctaggc ggcgctgaaa
      121 gatgccgcgg ctgctccggg tggcggccgc tagaagcctg gtgctctgaa ggtcagcaag
      181 tcaagtagca ggggttcagg agagcttgac accttcatag taatggcaga gaagcggccc
      241 ctagggcctc tggggcctat gatgtatggc aagctgcctc gcctggagcc agacccaggg
      301 ccaggacaca gcctgcccct ttctgctagc agccaggact cctgcaatta caaaggtgca
      361 tatttctcct gccccatagg gggtacttcg aaggcaggat ctgagcggtt ggcatcctgg
      421 accccatatc catctttgta ccccactggt gtggcaggat ccccactccg gggtgacaac
      481 ctactgacaa actgcctgct ctaccgtccc ccgacagaag gctctgaaaa gatacaagac
      541 tcaagtgagc tgctgccctt cggtccccag gctcatgcgt acccaggccc gcccctggcc
      601 gcgcccaagc ctgtctaccg caaccctttg tgttacggac tctccacttg cctcggagat
      661 gggggaacaa agagatcatt ggatggtgac tggaccctgg tgacagggcc cctgctgcct
      721 tctgctgacc caccctgtcc tctagctaca gctcctggca agggccagcc cctggatggg
      781 acgttcttgc gaggactacc atctggggga cctggcaagg actcttccct gcctttttcc
      841 ccgtgccagg cattcttgga gaagtatcga actatccaaa gcacaggttt cctggcttcc
      901 aagtacacca gtccttatcc tggggatgca aagcaagcaa tgtctgaggg gccctccagt
      961 ccttggactc aacttgcaca gcccctaggg ccaccttgcc aggatgcagt ggcagcccac
     1021 tatccactgc ccccaccgcc acaggccctg ccttgccctc catcttgtca tccagaaaag
     1081 cagggaagct atggctcgtt gctcccactg ccacctctag gagcccacaa gggggctgcg
     1141 taccaagctg gggggctggg cagcccttac ctgaggcaac aggcacccca ggctccgtac
     1201 atgccccctc ttgggataga cagttattcc tactcctctg cacccctccc agcaccatca
     1261 ccagggctca aactggagcc ccctcttgct ccaaggtgcc cactggactt tgttccccaa
     1321 actctgggtt ttccttatgc cagggatgac ctctctctct atggggcatc cccggggctt
     1381 gggggaacac cgccttccca ttcccagaac agtgtgcagc ctgtgccaca gcccggtgcc
     1441 ttccagcgag catgccagcc tttgccagcc agccaaccct gctctgagcc tgtgagacct
     1501 gcagagaagc caactccaga agctcaagag aagatgtggc tgcccagctg caggaaagag
     1561 caactccagc ccaggccaaa cgagcgtcct ggagtgccta ttgttatccg ggacagtcca
     1621 gttccccgca cctcaccagc actgcacccc tgtgccaagg agcggcagtc tgtcccacag
     1681 aaggatgcca ggcctcccag ctccccacca atgcccgtga ttgacaacgt ttttagtctg
     1741 gccccttacc gtgactacct ggatgtgcag acaccagagc ccagggctga gcgggactcg
     1801 gctccagcca ccagtaagag ccaagacaaa gattgcaagg ggaacctgcc tgctcaggat
     1861 ggagcctcca ggtctcactg ctctcttcgt gaggaggtgg ctctggactt gagtgttaaa
     1921 aagacgatgg cagagggtgt ccctgtcaag gtccccagtc ctgaggtgca tgaaaagccc
     1981 gctgaagctg tggatgggcc aggtatagaa aacacagtgt caggtctgcc tggcctaaaa
     2041 aagatggtca cagaaatccc tgaagtaact gcagaagcca caccaaggac caacttccat
     2101 agctctgtgg ccttcatgtt ccgaaaattc aagatactcc gtactgcgcc cgtacctgca
     2161 gctattgtct catctcccac taccccggct cctgtccctg cgcctgcccc tgcacagcct
     2221 gtacccaacc ccccgtctgt gccagtggga ctgcagatcc tcactcagcc tttgccagtg
     2281 gcatgcttca acctggccct gcctagccca ccagccatag tggcctcccc ggccccagcc
     2341 tctgctccac ctccatcacc agctcctgct cctgctccag cctcgggtcc tgctccatcg
     2401 tctgctcaag ttcccactgc agccccagtg gactccccgg aacagcactt cacagggctg
     2461 cacacatccc tctgtgatgc catctcaggc tctgtggccc attctccacc agagaaactg
     2521 cgggagtggc ttgagacaac tgggccgtgg ggccaggctg cgtggcagga ctgccagggt
     2581 gttcaggggc tactaggcaa actgctgtcc cagctgcaga agttcgtgtg cacacagcgg
     2641 tgccccttcc ctcatgtagt acgggctggt gccatctttg tgcccatcca tctggtgaag
     2701 gagcgtctct ttccaaagct gccaccggcc tctgtggacc acgtgttgca ggaccaccga
     2761 gtggaactac ggcccaccac tctgtcggag gagcgtgcgc tgcgtgaacg tgccctgcac
     2821 ggctgcacct cgcgcatgct gaagctgctg gcactgcgtc agctgcctga catctatcct
     2881 gacctgctgg gcctacagtg gcatgactgt gtccgccgcc agctgggtgg ctttgacact
     2941 gaggccagaa ctttatcccc atcagaaccc acggtcacca gagatgagcc agaaagccaa
     3001 gccttggctg gaaagttgcc agcccccaag gtcaagaagc cagggaggaa gccaccgacg
     3061 cctggccctg agaaagcaga ggcagccact ggggaagggt cacgtaatcc ctcacctagc
     3121 tctggtgcca gcaccagccc accaggtccc accctgaggg cccgcttccg caacctgtta
     3181 gaaaatgcct ggctcaatgg tgtggcactg cctacttggg gtcacaaggc ctccggagca
     3241 gatcgatctt cgcctcaccc ccagctcttg ggcagccaga cccatcatct gtagcattgt
     3301 taccagggct attgggacag cccaccatcc ggggactgct gtgtacctgt cctgacatcc
     3361 agctgcccac ggctaggagt ggatatgagg ctgagcccac ctaaccgggc agagacttgc
     3421 tgaactttta acttgaggat ccttctcttg agaaaacctg tgggcattgg agccaacccc
     3481 acctggcctt gaatcctgac tgttgtgtcc tgggcaagca cttcacctct catgagccct
     3541 tgttccccat ttgtagaata agacaacaca gcctacctca caagggttgt tgtggggatg
     3601 atgtctgaaa tacaactacc atgctttggt ttgcttcttg cccgggatag gcctgggacc
     3661 tcagtcaggc tgtggaataa caagactgag gttggcagaa ctttattgtc aagtcttcat
     3721 gtgtcttgga acccagttac tctaagaggt acctggtaca atgtgtatga ctcacgtgct
     3781 tcttccccca gaccactgca ggtgtaggga cctggcctgg ggctggcttg aagagcctaa
     3841 gactgttctg gagtcatatg tctgacctac ctgggctgct tctcacaccc ctgtagggtt
     3901 gtgtagagtt gtatgcttct agagccaagc agctgcaggg accggacccg acaggctgag
     3961 ctcaatactg ggagaaggtc cagactgagc actcttggta tttcccaaga ctcttggggt
     4021 ctcctccctg caagtgggct gtattcagct ggtggctgat aagttcctgt cttatttaag
     4081 ggttttgatg agactgcgcc ctgggggaca gctattaaag catttgggtt gtttttggag
     4141 ctgggatcta gctttgtact tgaggggtca tagatgagtg ttgcatatca cccgtcacca
     4201 tctggctgtc gtccctgctc ctgttcagga tgtctacagc ttctagtatt ccactcctac
     4261 aggcccgctc acacctacct gctggccatc cactccaccc tgggaaagac cttcccgtga
     4321 ctatggagaa tcttagaggc gggtgccttt atgtgtcacc acatctgtgt gcctgtctcc
     4381 taggactgaa gatggaagtg tcaccctcct ttagtgtccc ttcagtttca ccataggctc
     4441 actcacattc cccaccatcc ctcttttctt gaacatggct tccttcgacc tgtgccagtc
     4501 cgtcagagct cgttagagct gtgtgtgcta gcagctattc ccatctatac taactgcaag
     4561 gatgagcctg gccccgagcc tggattgaat gtggcagcta ccattgccct tgtgcaggcc
     4621 caagaaattc agttaggtgt gaatcccctt tctatcacca gcaacaccag aagttctaat
     4681 gattatttgg gttcatgggt tttgactttg cttttagatg gggtctcacc ctgtagcccc
     4741 agtgggccta aaaaatgagt tgttgggtgt gtatgcgagt gcgtgtaacc acacttagtt
     4801 ttggataatg gttcaagact tccacagttg agcagccaca tctggtgatg gctttcttgt
     4861 aggcagaatc ctgacataga tcatcgtacc acatggcaga agggctcagg cacgtgtcat
     4921 ccgggcagct tgta
//
