LOCUS       NM_025851               1878 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1700010I14 gene (1700010I14Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_025851
VERSION     NM_025851.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Kaneda,Y., Miyata,H., Shimada,K., Oura,S. and Ikawa,M.
  TITLE     Testis-specific proteins, TSNAXIP1 and 1700010I14RIK, are important
            for sperm motility and male fertility in mice
  JOURNAL   Andrology 11 (5), 799-807 (2023)
   PUBMED   36598146
  REMARK    GeneRIF: Testis-specific proteins, TSNAXIP1 and 1700010I14RIK, are
            important for sperm motility and male fertility in mice.
REFERENCE   3  (bases 1 to 1878)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
REFERENCE   4  (bases 1 to 1878)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122893.6, AK006307.1, BC050753.1 and AV257018.1.
            
            On Oct 31, 2007 this sequence version replaced NM_025851.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK161278.1, BC050753.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-30                AC122893.6         188456-188485
            31-415              AK006307.1         3-387
            416-1869            BC050753.1         388-1841
            1870-1878           AV257018.1         226-234
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 5.53 cM"
     gene            1..1878
                     /gene="1700010I14Rik"
                     /note="RIKEN cDNA 1700010I14 gene"
                     /db_xref="GeneID:66931"
                     /db_xref="MGI:MGI:1914181"
     exon            1..89
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..1546
                     /gene="1700010I14Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein C6orf118 homolog isoform
                     1"
                     /protein_id="NP_080127.2"
                     /db_xref="CCDS:CCDS28385.2"
                     /db_xref="GeneID:66931"
                     /db_xref="MGI:MGI:1914181"
                     /translation="MAEDQEPDFYLKWKHCEKPGVKTLSNLRKLLSQLQEDHRKDISV
                     YISGHLNPRKLYKPPETIFQHWRNSNRTWEKPTHSTPTIPPASRNKEVSEMKDAWVHF
                     TVSTALHPDDTHNTPLFRYLNPRVQASRALKDGASAALQEEEKELKERLAFSREKHMK
                     EELRLPEMKVLRYPEVVSSRQCSRSAPGRDVYRYISPYLAGITKADSYKKFLSFQREV
                     LAKEETLKYDFTGSKVAVAHENRLKEELQKICTCNPQQFNRLQVFGEIFEDICNSSLI
                     FGDLLKEIKDEYELYMAALLDSQPTAQYQRLLAEVRGLENSPRPSCDIDQAKEHLRKV
                     QQAYLEALEHNDKLRNELEAESLLLQSAKEKAANGKMKDEKELTLVEKVEKRRCEIFE
                     KLDEIKALEKHIKENMVHSGVFKIAESGLKSIEDEAIKLETSNRILKKKIKVIESQMK
                     QLLLRSKISEEERQALWDLIREYSDIEDVEDVEGDFEMLRKLT"
     exon            90..796
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            797..919
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            920..979
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            980..1104
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1105..1163
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1339
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1340..1393
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1394..1455
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..1878
                     /gene="1700010I14Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1855..1860
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700010I14Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1877
                     /gene="1700010I14Rik"
                     /note="major polyA site"
ORIGIN      
        1 ttggcaactg cagcttccgt tggcaactgc agcttccgtt ggcagcgagc cgaccagagg
       61 ggcaatggct gaggatcagg aacctgactt ttacctaaag tggaagcact gtgagaaacc
      121 gggtgttaag actctaagca acttaaggaa actcctgtcc caactccagg aggaccacag
      181 gaaggacatc agtgtgtaca tttcaggaca cctgaacccc aggaagctct acaagccacc
      241 tgagaccatt ttccagcact ggcgcaattc caacaggaca tgggagaaac ccacccactc
      301 cacacccacc atccccccgg cctccagaaa caaagaagta tcagagatga aggacgcttg
      361 ggttcacttt acagtgagca cagccctgca tcccgatgac acacacaaca cgccactgtt
      421 caggtacctg aacccacgcg tacaggcctc ccgtgctctc aaagatggtg cctccgcggc
      481 tctgcaggag gaggagaagg aactgaagga aagacttgca ttttctcggg aaaaacacat
      541 gaaggaagaa ctcaggctgc ctgagatgaa agtgctcaga tacccagagg tggtatccag
      601 ccgccagtgc tccaggtctg ccccaggcag ggatgtgtac cgttacatca gcccctacct
      661 agctggtata acgaaagccg acagctacaa gaagttcctg agtttccaaa gagaagtgct
      721 ggcaaaggaa gaaaccctga agtatgactt cacggggagc aaggtggctg tggcccatga
      781 gaacagactg aaggaggagc tccagaagat atgcacctgc aaccctcagc agttcaacag
      841 gttgcaggtc tttggggaaa tctttgagga tatttgcaac agctctttga tctttgggga
      901 tctactgaaa gagattaagg atgaatatga actctacatg gcagctctcc tggactcaca
      961 gcccacagcg cagtatcagc ggctcttggc tgaagtcagg gggttggaga acagccccag
     1021 gcccagctgt gacattgacc aagccaagga gcacctgagg aaggtccagc aggcttatct
     1081 agaagccttg gagcacaacg acaaactcag gaatgagctg gaggctgaga gcttattgct
     1141 gcagtctgct aaggaaaaag cagctaatgg gaaaatgaag gatgagaagg aactgactct
     1201 ggtcgaaaag gtggagaaga ggaggtgtga aatctttgag aaattggatg agattaaagc
     1261 gcttgagaaa cacatcaaag aaaacatggt gcactcggga gtatttaaga tcgcagagag
     1321 tggccttaaa agcatagagg atgaagccat aaagttggaa acatcaaaca gaatcttaaa
     1381 gaagaaaata aaagtgattg aaagccagat gaagcagctc ttactaagga gtaagatcag
     1441 cgaggaggaa aggcaggcgc tgtgggatct cattagggaa tattcagata tcgaggatgt
     1501 cgaggatgtg gagggtgact ttgaaatgct tagaaaactg acataggaag cctctgcttc
     1561 ccagacgaac atctggatcg gcgatggaga tgctgcttct tatcatctgt cccactggag
     1621 cgtcagtgtg gaacgtgctc catcctcggc ttgttgatcg atgtgtcctc caggtgactc
     1681 cttccacttt atatgtgtat acatatactt tatatgcagt tcatctttta ttctgtaact
     1741 ttgaactgga caaaacaggt ttaaatattt aataagaatg aagttttttt ttttatcctg
     1801 ctgagatgga aatcaattct gtttaagtgt tgacatgttt ccacacgtgc atttaataaa
     1861 ataaaggtca cacccgag
//
