LOCUS       NM_027939               2159 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 1700006A11 gene (1700006A11Rik), transcript
            variant 1, mRNA.
ACCESSION   NM_027939 XM_131185 XM_913910
VERSION     NM_027939.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Huang GH, Sun ZL, Li HJ and Feng DF.
  TITLE     Rho GTPase-activating proteins: Regulators of Rho GTPase activity
            in neuronal development and CNS diseases
  JOURNAL   Mol Cell Neurosci 80, 18-31 (2017)
   PUBMED   28163190
  REMARK    Review article
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Ruan Y, Sensen CW and van der Hoorn FA.
  TITLE     A novel group of multi-GAP-domain proteins
  JOURNAL   Mol Reprod Dev 75 (10), 1578-1589 (2008)
   PUBMED   18363199
REFERENCE   3  (bases 1 to 2159)
  AUTHORS   Tcherkezian J and Lamarche-Vane N.
  TITLE     Current knowledge of the large RhoGAP family of proteins
  JOURNAL   Biol Cell 99 (2), 67-86 (2007)
   PUBMED   17222083
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK132965.1 and BC137977.1.
            
            On Oct 24, 2017 this sequence version replaced NM_027939.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK132965.1, BC137977.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-11                AK132965.1         2-12
            12-1994             BC137977.1         1-1983
            1995-2159           AK132965.1         1996-2160
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 54.68 cM"
     gene            1..2159
                     /gene="1700006A11Rik"
                     /note="RIKEN cDNA 1700006A11 gene"
                     /db_xref="GeneID:71824"
                     /db_xref="MGI:MGI:1919074"
     exon            1..104
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            105..200
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..1759
                     /gene="1700006A11Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC71824 isoform 1"
                     /protein_id="NP_082215.1"
                     /db_xref="CCDS:CCDS51064.1"
                     /db_xref="GeneID:71824"
                     /db_xref="MGI:MGI:1919074"
                     /translation="MIMSNHQGTSGPHESENFVDVLNLPDAEKKTVNKKQPFITQVFH
                     KASVPHQDQVCTSLPVTKRGILFGNDLSVVCDDGNLPKAILDMLSILNEKGAITEGIF
                     RISGNMSACHALKERLDYGKKVNLKKECVLAVASVLKEFLHNIQGSVLTSRLYDIWLD
                     VLDQENEEEKLAAVQSLLQRLPYPNVSLLRELFRMLHNIERNSAVNKMTAYSLSVCMA
                     PCILCLPRSCNSGLANDISNEISLVKFLIENSLKIFGESTVLRYDASSVSCPDVEKAS
                     GPLNNITNFDEMKDKEYQDNHCQSGMTCPTGNNSVPMSPTAPLHNEGTIASEKPVKRS
                     FIKPMITCGSTTSHDNVCITPSPSAPNKGHLFGKSLTIICKDGNLPAPVLDMLSIIDA
                     KGPDTERIFRTLANKPYLTLREKLDSAEEMNLREESVYIVASVLKEFIRNIPGSLLCS
                     NLYGKWLAVLDQEFHDQKISAIQSLLIQMPLPNVLLLRHLLSVLHKIKGRSSITHMTA
                     YALSVRIAPSMLWNPSLSNSGFGNDISQKKRLQKET"
     exon            201..379
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            380..541
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            542..651
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            652..841
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            842..1100
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1101..1276
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1277..1435
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1436..1545
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1546..1735
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1736..2159
                     /gene="1700006A11Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agatttcagc agttggtctg ccaactgcca tacctacctt tggtctttag tgccacagaa
       61 gaccatccag ggaaagggtc tccatttcag cctccagtgt aaagggcttg acaaccctta
      121 ttatatgata atgagcaacc atcaaggaac ttctggacca catgagtcag aaaacttcgt
      181 ggatgttctc aacctgccag atgcagagaa gaaaacagtt aacaaaaaac agcctttcat
      241 aactcaagta ttccacaagg cctcggtgcc ccaccaggac caagtttgca catccctgcc
      301 agttactaag agaggaatac tttttggaaa tgatctctct gttgtttgtg atgatggaaa
      361 tcttcctaaa gcaattctgg atatgctctc cattctcaac gaaaaaggag caatcactga
      421 aggcatcttc aggatatcag gcaatatgtc agcatgccac gccctaaaag aaaggctgga
      481 ttatggaaaa aaggtgaatc tgaaaaagga atgtgttctc gctgtggcat ctgtcttaaa
      541 ggagtttctt cataatatac aaggaagtgt gctgacttct agactgtatg atatatggct
      601 tgatgtcctt gaccaagaaa atgaagagga gaaactagct gcagtgcaga gtcttttaca
      661 gcgtctgcct tacccaaatg tcagcctctt gagagaactt ttcagaatgc tacacaacat
      721 agaaagaaat tctgcagtta acaaaatgac tgcttatagt ttatctgttt gcatggcccc
      781 atgtatccta tgtctgcctc gttcctgcaa ctcgggatta gcaaatgata tctccaatga
      841 gatttccctt gtaaaatttc tcatcgaaaa cagtctgaaa atatttggag aaagcacggt
      901 tttacgttat gatgcaagct cagtgtcttg ccctgatgtg gagaaagcat caggtcccct
      961 aaacaatata actaactttg atgagatgaa ggataaggaa tatcaagaca accactgtca
     1021 aagtgggatg acatgcccta caggcaacaa ttcagtgccc atgagtccaa ctgctcctct
     1081 tcacaatgag gggactatag cttctgagaa acctgtcaaa agatctttta taaagccaat
     1141 gattacctgt ggctcaacta ccagccatga caatgtgtgt ataaccccat ccccatcagc
     1201 accaaacaag ggacacctct ttggaaagtc tctcaccatt atctgtaagg atggtaatct
     1261 gcctgctcca gttttggaca tgctttctat catcgatgca aaaggaccag acacagagag
     1321 aatattcaga acattagcta ataaaccata cctcacctta agagaaaagc ttgactctgc
     1381 agaggaaatg aacttgagag aggaatctgt ttatatcgta gcatctgtct taaaggaatt
     1441 tattaggaat attccaggaa gcttactttg ctctaatctg tatggaaaat ggcttgctgt
     1501 ccttgatcaa gaattccatg atcaaaagat ttctgctatc caaagtcttt taatacagat
     1561 gccattacca aatgttctcc ttttgagaca ccttctctct gtgctacaca agattaaagg
     1621 tcgctcttct attactcaca tgactgctta cgctttatca gttcgcatag ctccaagtat
     1681 gctttggaat ccttctctct ccaactcagg gtttgggaat gatatctcac aaaagaaacg
     1741 actgcagaag gagacttgac aagcagcaac cggattggcc aaatagcttc tggatggaga
     1801 aatttttttc tcagcaactg aatacttgaa tccccaggac tacattgaat tccatttctc
     1861 cttcacttta ttgattattc cactaagacc cctttttatt atttaatata accagctttg
     1921 tcagcatttg aaggaatttg tttggatttt tgcttctgtc cagaaatgag aatcccaccc
     1981 ccaaataaca tgcctctgtc aaccaataga ggcatcgggt tgattctctt agattgtgga
     2041 cttgagcctt aagtaagcac ttctcaggtc ccagctcatt ccttctgaat gtgtcatgtc
     2101 ccctcccact tacttatacc tctgaaaagc ttattaataa acagtacttc tgtttctcc
//
