LOCUS       NM_027948               2050 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 1700003E16 gene (1700003E16Rik), mRNA.
ACCESSION   NM_027948 XM_001478332 XM_001478343 XM_001479780 XM_001479786
            XM_887968 XM_897806
VERSION     NM_027948.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Gineste,C., De Winter,J.M., Kohl,C., Witt,C.C., Giannesini,B.,
            Brohm,K., Le Fur,Y., Gretz,N., Vilmen,C., Pecchi,E., Jubeau,M.,
            Cozzone,P.J., Stienen,G.J., Granzier,H., Labeit,S.,
            Ottenheijm,C.A., Bendahan,D. and Gondin,J.
  TITLE     In vivo and in vitro investigations of heterozygous nebulin
            knock-out mice disclose a mild skeletal muscle phenotype
  JOURNAL   Neuromuscul Disord 23 (4), 357-369 (2013)
   PUBMED   23375831
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: 1700003E16Rik is most abundantly expressed in tissues rich
            in highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY253424.1, BF452482.1, CK137463.1, BC126949.1, AK005628.1 and
            BB429769.1.
            
            On or before Feb 9, 2009 this sequence version replaced
            XM_001479780.1, XM_001479786.1, XM_001478332.1, XM_001478343.1,
            XM_897806.2, XM_887968.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849374,
                              SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                BY253424.1         2-99
            99-586              BF452482.1         1-488
            587-840             CK137463.1         312-565
            841-1262            BC126949.1         945-1366
            1263-2016           AK005628.1         1285-2038
            2017-2050           BB429769.1         237-270
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 35.94 cM"
     gene            1..2050
                     /gene="1700003E16Rik"
                     /note="RIKEN cDNA 1700003E16 gene"
                     /db_xref="GeneID:71837"
                     /db_xref="MGI:MGI:1919087"
     exon            1..187
                     /gene="1700003E16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             170..1966
                     /gene="1700003E16Rik"
                     /codon_start=1
                     /product="uncharacterized protein C2orf81 homolog"
                     /protein_id="NP_082224.1"
                     /db_xref="CCDS:CCDS51818.1"
                     /db_xref="GeneID:71837"
                     /db_xref="MGI:MGI:1919087"
                     /translation="MSHEGSRQARDRGVTRSKAEKARPPTQPVPQVDIVPGRLNEAEW
                     IAFMSLEEGEDVVGDILADLMTRVMECAFKVYLTQQCVPFTISQAREAMLQITEWRFL
                     ARDEGESAVAEDPTWGEDEEPLACTTDSWAQGSVPVLHTPAPVCVEEQFHNEEPGNPD
                     QFLLGSSWDKESQKPTQPSEPSAEPKVTPRPTATLEAFEEAEPGDALEVPHGQEGSHM
                     LAVPSKESLRSTAEGERVYSPQSSLKQPQVVRLQASEKESSFGSHLSLEDLYLCMPQP
                     DAAGDRLSLQSKGQLHSSPIGSESHLGALTPAEPSAFQEPEVLGERPKHKTTTLRMDS
                     SRLPRHWVRPVAEVLIPDLEVHPLEIYRGRPRRSQAGTATSACESQALSSRAPSKPHV
                     SSPRFPLQRCATFRALGPDPSLNLAQTSPSFGSNVPFLSPGFRFLPRNPIPPDVASTP
                     TPKLWPLAKWPSGWEREAEQLGELWAGRTRVPPQGQEPVEVTPLEEDSGWPLAAPQVL
                     EATSQVLWKPMVISETMKLVPGVSMWNRGTQELLNPAVIRKEAEEGTPQAPEQQPIQT
                     GVSKPQVIMKQIRNETPKAWLLPTKPVPHSGS"
     exon            188..409
                     /gene="1700003E16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            410..631
                     /gene="1700003E16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            632..2050
                     /gene="1700003E16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1999..2004
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1700003E16Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2020
                     /gene="1700003E16Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggaacttgcg gcgcgcagct acgcggttac caagcaaccg tggaccacgc cagggaccct
       61 cagcggggcc tggttgccga ggagaccgtt gggtcgcggc cactgcagct acaacgatgg
      121 agggtcctga aggcagctga aacaccgcct tggagtgact gtcacgaaaa tgagtcacga
      181 aggctcgagg caggcgcgag atcgtggggt gacccgatcc aaggcagaaa aagcccggcc
      241 acccacccag ccggtgccgc aggtggacat cgtgcctggg agactcaatg aggcagaatg
      301 gattgcgttt atgtccctgg aggagggcga ggacgtagtg ggtgacatct tggctgacct
      361 tatgactcga gttatggagt gtgccttcaa agtctatctg acccagcagt gcgttccatt
      421 caccattagc caggcccgag aggccatgct gcagatcact gagtggcgct tcctggcccg
      481 agatgaggga gaatctgcag tggctgagga ccccacgtgg ggagaggatg aggagcccct
      541 ggcatgcact acggattcct gggcccaggg ctccgtgcct gttctgcaca caccggcgcc
      601 cgtttgtgta gaggagcagt tccacaacga agaacctggg aacccggacc agttcctttt
      661 aggttcatcg tgggacaaag agtcccaaaa gccgacacaa ccttcagaac cttctgccga
      721 gcccaaagtc accccgagac ccacggccac cttggaggcg tttgaggaag ctgagcccgg
      781 ggatgccttg gaagtacccc acggccaaga gggaagccat atgttggctg tgccctcgaa
      841 ggagtcttta cgatctacgg cggaaggcga gcgcgtctac agcccccagt cttctctgaa
      901 gcagccccaa gtagtccgtc ttcaggcctc tgagaaggaa tcatccttcg gctcacacct
      961 gtcgctcgag gatctttacc tctgcatgcc ccagccagac gcggcagggg accggctgag
     1021 cttgcagagc aagggccagc tccacagcag cccgataggg tcggagtccc acctcggtgc
     1081 actcaccccg gcagagccct ccgcgttcca ggagcctgaa gtcttgggag agcggccaaa
     1141 gcacaagacc accacgttgc gcatggattc ctcgcggctg ccccgccact gggtgcgccc
     1201 cgtggccgag gtcctgatcc cagacctcga agtgcaccct ttggaaatat atcgcgggcg
     1261 cccgcgcagg agccaagctg ggaccgcaac ctcagcatgc gagtcccaag cccttagctc
     1321 gcgtgctccc tccaaacccc atgtctctag cccaaggttc cctctccagc gttgtgctac
     1381 attccgtgct ttgggcccgg atcctagttt aaacttggcc caaacctcac cgtccttcgg
     1441 gtcaaacgtg ccattcctca gccccgggtt ccgcttcctc cctagaaacc caatccctcc
     1501 cgacgtcgcc agcaccccta cccccaaact atggccccta gctaagtggc caagtggctg
     1561 ggagcgggag gcggagcagc tgggagagct gtgggcgggt cggactcgcg tgcctccaca
     1621 gggtcaggaa cctgtggagg tgacaccttt ggaggaggac tctggatggc ccctagcggc
     1681 gccccaggtc ctcgaggcta cgtcccaagt gctttggaag cccatggtta tttcagaaac
     1741 catgaagctg gttcctggtg tgagtatgtg gaaccgggga acccaggagc tgctcaatcc
     1801 tgctgtcatc cggaaggagg ctgaagaagg caccccccag gcgcctgagc agcaacccat
     1861 ccagacaggt gtgtccaagc ctcaggtgat tatgaaacag ataaggaacg agacccccaa
     1921 agcctggctg ctccccacca agcctgtgcc ccactctggg tcctgagcct ccacactggg
     1981 aaatggacct tgctcaaaaa taaacgaatt gccgcaggaa ctgactggca aagatggtgc
     2041 catttcttcc
//
