LOCUS       NM_028166               3165 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1600014C10 gene (1600014C10Rik), transcript
            variant 2, mRNA.
ACCESSION   NM_028166
VERSION     NM_028166.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3165)
  AUTHORS   Timmermans,S. and Libert,C.
  TITLE     Overview of inactivating mutations in the protein-coding genome of
            the mouse reference strain C57BL/6J
  JOURNAL   JCI Insight 3 (13), 121758 (2018)
   PUBMED   29997285
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3165)
  AUTHORS   Bailey,P.J., Klos,J.M., Andersson,E., Karlen,M., Kallstrom,M.,
            Ponjavic,J., Muhr,J., Lenhard,B., Sandelin,A. and Ericson,J.
  TITLE     A global genomic transcriptional code associated with CNS-expressed
            genes
  JOURNAL   Exp Cell Res 312 (16), 3108-3119 (2006)
   PUBMED   16919269
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC157552.10 and BC085480.1.
            
            On Apr 26, 2007 this sequence version replaced NM_028166.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085480.1, AK146474.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                AC157552.10        90102-90163
            63-3165             BC085480.1         1-3103
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 25.36 cM"
     gene            1..3165
                     /gene="1600014C10Rik"
                     /note="RIKEN cDNA 1600014C10 gene"
                     /db_xref="GeneID:72244"
                     /db_xref="MGI:MGI:1919494"
     exon            1..113
                     /gene="1600014C10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            114..284
                     /gene="1600014C10Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..550
                     /gene="1600014C10Rik"
                     /codon_start=1
                     /product="protein C19orf12 homolog"
                     /protein_id="NP_082442.1"
                     /db_xref="GeneID:72244"
                     /db_xref="MGI:MGI:1919494"
                     /translation="MPIMVDDIMRLLCSISQERKMKAAVKHSGKGAMVAGAMAFVGGL
                     VGGPPGIAVGGTVGGLLGAWMTSGQFKPVPQILMELPPAEQRKLVNEAMAIIGNLDWT
                     DAVQLTALVMSNQAMQQRLLAMLTTYVTKELQAEIRYED"
     exon            285..3148
                     /gene="1600014C10Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2149..2154
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1600014C10Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2172
                     /gene="1600014C10Rik"
                     /note="major polyA site"
     regulatory      3125..3130
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1600014C10Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3148
                     /gene="1600014C10Rik"
ORIGIN      
        1 ggaaggtggg agggcggagc cagggtggcg gtggcctgtg aacgcctctc tggagctggc
       61 agagcagagc cggcctcagt gccttggcgg tcccagactc cagctcggta aagggtctgc
      121 tgagatgccc atcatggtag atgacatcat gaggcttctg tgctccattt cccaggagag
      181 gaagatgaag gcggccgtca agcactctgg aaagggtgcc atggttgcgg gggcaatggc
      241 cttcgtcggt ggcttggttg gtggcccacc aggaatagct gttgggggga ccgttggggg
      301 cctgttaggt gcctggatga cgagtggaca gttcaagccc gttcctcaga tcttaatgga
      361 gctgcccccc gctgaacagc ggaaacttgt taacgaagcc atggccatca tcgggaactt
      421 ggactggaca gacgcagtgc agctgactgc tctggtcatg agcaaccagg ccatgcagca
      481 gaggctcttg gccatgctaa cgacctatgt caccaaggag ctgcaggctg agatccgcta
      541 tgaggactag gccccgcccc ctggggagtg gggctctcat tttagatgat tctatggctc
      601 attgaaggtg accagggaat gggggaagcc tgacttctgg gaaacttgtc taataccagc
      661 attgattgta agccgccatg ctagtgcatt ctgttggacc gtcctgctgg agaggcatca
      721 gccatgcctc ttgggctgtg tgtgctatgg aagggtacag gcgtgcctgc tgtaggcatt
      781 cacggacagc ttggagtcct cccgatgacc atgtgggtct aaaaggttct catgttgttg
      841 gctggccgac catagcagat gcttctcttt ctgtgaagtg tacctccagg tacctgtcac
      901 aggatcgaat ccccttagac tctggggtct tggggttcag agccagctct tgtcaggatt
      961 gtgctaacct gctgagtgtt tccttccctt ggctaaggac ttcccagtgg tctcatggtg
     1021 acaactgtcc ctcctttgag tgaagccaca gatgccaggc aggttctatt ctctgctaca
     1081 ggctatgccc tagacgctct tgagtaactt tagtttagct tgtaggagct tcttctgcct
     1141 ccttaagaaa aatcatggca cttcattata ttttattttc catgtcgatt ctggactctt
     1201 tttgttctct ccactttcgt agcctaaatt catttagctc tgttttcttt ttcttcttac
     1261 tatgtttcct tgggctagcc ttgaagtcct gggctcaagc tacatagctg ggactgtagg
     1321 cttgtgccac catacctagc tttacctcaa agactgttgt ccactctact tttcctaagc
     1381 cctcccgtgt tctcctgtct gctggctgca atctataatt catttgtgtg aaaagacaaa
     1441 attaccaatg acttgagttc agagatccta acatagctag gtgctatggt gcagacccat
     1501 acccacggtc ccagataatt gaaaagctga agggggaaca tccttgggcc caggaatcca
     1561 aggacaaccg gacattgtgg aagccgggag ataggtgggg acacacacat cttcttagtt
     1621 agcttttatt tgcagtcacg gaatcaagag gcagcaagtg ccctggtgag acggagagag
     1681 agggtggaca agggcgagca agggaaagtg gaaacagcaa gaaaactaga ttaacctccc
     1741 gtgacactgg ctgtttatgg attgggctag cctcgcctcc atttccctaa gtgacggagg
     1801 ctcaaatctg acattagctt gtttgttttc cttgtgttgt ggatggaagc cagggccttg
     1861 cataggctaa gtgccacccc tgagcgctgc tcctagtcct cctctctgct gattcccgcc
     1921 cagcctggtc ccagcccttg agtgactcag ctttggtctg gtcggttggt cccagtgctg
     1981 gagctcaaca tctaacattg tatccatttg attaagtatt tgatacttcc tccttatccc
     2041 tccttggagg tgctcactca ctgagggcag gagctatgtg tctcggtcac ttctcctgcc
     2101 tccagcttgc tcctgcctgg caccatggct tttgtggggt agacactcaa taaatatata
     2161 tttttaaagc tatgtatttc atatctttct gtttgtttgt ttatttattt atttatatct
     2221 ttacttattt attttacatg ttttgtctgc atttatataa gtacgatgta tgtgtctggt
     2281 tcccacagag gccacaggag gcactggacc tcctggaaac gatgttactg acaattgtga
     2341 gccgccatgt gggtgctagg aactgaaccc aggccctcca ttagggcatc aatggctaaa
     2401 caatctccct cctctaggtt tgggttttta aacctgggtt tctccatgtg attctggttg
     2461 gcctcaaact cctggtcttt cttcctgcct cagccccttg aactcggaga ctacaggcag
     2521 gcatttccaa gccaagacaa atacgttttg ttgttgttag aagtctttaa gttcttattg
     2581 tttgcctttt ctttgtttag ttttttgttt gtgtttgtgt tttgttttgt tttgagacag
     2641 gatctcatgt agcccaggct agcccccaac tctatgtagc caaagacgac cttgaactct
     2701 tgattctcca gcctccatca ctgccaagtg ttgggaatta cagagataat acctttatgt
     2761 gagacttcag taggtatttt tggaagttat tgttctgaaa tcacttcctg tggaattcct
     2821 ccaggaagga aacatgtgac aggagagacc tagaatccag ttttaagctt tttgaaacca
     2881 ctgagctgct agccacggaa gctggagttt ggcctggtgt ccctagaacc cagagcctcg
     2941 cttgagcacc atgtggtccc tcagttttca caaacaggtt tgggacatgt tttcacatga
     3001 aatagtttta gtcaaatgta tgctgtctct gaagtggggt atcccaacct cagatagttc
     3061 caccccaagg tatcccccat gctatatcct ttcagaacta ctacccgact atcatcaaat
     3121 tactaataaa ttacttttcc ctgaaaaaaa aaaaaaaaaa aaaaa
//
